RNA–Protein interactions for RNA: YER008C

SEC3, Transcript of Subunit of the exocyst complex, yeastyeast

Gene SEC3, Length 4,011 nt, Biotype protein coding, Subcellular localisation Cellular bud .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC3YER008C MOD5P07884 428 aa1.92□□□□□ -2.1
SEC3YER008C RDS2P19541 446 aaKnown RBP1.92□□□□□ -2.1
SEC3YER008C LDH1P38139 375 aa1.92□□□□□ -2.1
SEC3YER008C YJL181WP46987 611 aa1.92□□□□□ -2.1
SEC3YER008C SCW11P53189 542 aa1.92□□□□□ -2.1
SEC3YER008C CWC24P53769 259 aa1.92□□□□□ -2.1
SEC3YER008C UTP13Q05946 817 aaKnown RBP1.92□□□□□ -2.1
SEC3YER008C IPL1P38991 367 aa1.92□□□□□ -2.1
SEC3YER008C STM1P39015 273 aaKnown RBP1.92□□□□□ -2.1
SEC3YER008C ROM1P53046 1155 aa1.92□□□□□ -2.1
SEC3YER008C ERP5P38819 212 aa1.92□□□□□ -2.1
SEC3YER008C PUF6Q04373 656 aaKnown RBP1.92□□□□□ -2.1
SEC3YER008C STB3Q12427 513 aa1.92□□□□□ -2.1
SEC3YER008C RPO21P04050 1733 aaKnown RBP1.92□□□□□ -2.1
SEC3YER008C ESC1Q03661 1658 aaKnown RBP1.91□□□□□ -2.1
SEC3YER008C AFT1P22149 690 aa1.91□□□□□ -2.1
SEC3YER008C PRE9P23638 258 aaKnown RBP1.91□□□□□ -2.1
SEC3YER008C PEP12P32854 288 aa1.91□□□□□ -2.1
SEC3YER008C UBP2Q01476 1272 aa1.91□□□□□ -2.1
SEC3YER008C SDH2P21801 266 aa1.91□□□□□ -2.1
SEC3YER008C PAM1P37304 830 aaKnown RBP1.91□□□□□ -2.1
SEC3YER008C YBL086CP38177 466 aa1.91□□□□□ -2.1
SEC3YER008C MGE1P38523 228 aa1.91□□□□□ -2.1
SEC3YER008C QDR1P40475 563 aa1.91□□□□□ -2.1
SEC3YER008C NUP85P46673 744 aa1.91□□□□□ -2.1
SEC3YER008C ALD2P47771 506 aa1.91□□□□□ -2.1
SEC3YER008C JIP5Q06214 492 aaPredicted RBP1.91□□□□□ -2.1
SEC3YER008C YPR084WQ06821 456 aa1.91□□□□□ -2.1
SEC3YER008C YHL008CP38750 627 aa1.91□□□□□ -2.1
SEC3YER008C MET10P39692 1035 aa1.91□□□□□ -2.1
SEC3YER008C NTE1Q04958 1679 aa1.9□□□□□ -2.1
SEC3YER008C SPT2P06843 333 aaPredicted RBP1.9□□□□□ -2.1
SEC3YER008C SEC20P28791 383 aa1.9□□□□□ -2.1
SEC3YER008C TPD3P31383 635 aa1.9□□□□□ -2.1
SEC3YER008C SUM1P46676 1062 aa1.9□□□□□ -2.1
SEC3YER008C SEN54Q02825 467 aaPredicted RBP1.9□□□□□ -2.1
SEC3YER008C YHL050CP38721 697 aa1.9□□□□□ -2.11
SEC3YER008C YHR219WP38900 624 aa1.9□□□□□ -2.11
SEC3YER008C CDC25P04821 1589 aa1.9□□□□□ -2.11
SEC3YER008C DNF1P32660 1571 aa1.9□□□□□ -2.11
SEC3YER008C QDR2P40474 542 aa1.9□□□□□ -2.11
SEC3YER008C ATE1P16639 503 aa1.89□□□□□ -2.11
SEC3YER008C ATG36P46983 293 aa1.89□□□□□ -2.11
SEC3YER008C POL32P47110 350 aa1.89□□□□□ -2.11
SEC3YER008C YDR444WQ04093 687 aa1.89□□□□□ -2.11
SEC3YER008C OXR1Q08952 273 aa1.89□□□□□ -2.11
SEC3YER008C BPT1P14772 1559 aa1.89□□□□□ -2.11
SEC3YER008C STE6P12866 1290 aa1.89□□□□□ -2.11
SEC3YER008C RPB10P22139 70 aa1.89□□□□□ -2.11
SEC3YER008C MLF3P32047 452 aa1.89□□□□□ -2.11
SEC3YER008C SSF1P38789 453 aaPredicted RBP1.89□□□□□ -2.11
SEC3YER008C MAD1P40957 749 aa1.89□□□□□ -2.11
SEC3YER008C SPR3P41901 512 aa1.89□□□□□ -2.11
SEC3YER008C CAF120P53836 1060 aa1.89□□□□□ -2.11
SEC3YER008C OPT2Q06593 877 aa1.89□□□□□ -2.11
SEC3YER008C CEM1P39525 442 aa1.89□□□□□ -2.11
SEC3YER008C YJR098CP47139 656 aa1.89□□□□□ -2.11
SEC3YER008C YMR074CQ04773 145 aa1.89□□□□□ -2.11
SEC3YER008C YCF1P39109 1515 aaKnown RBP1.89□□□□□ -2.11
SEC3YER008C TPS3P38426 1054 aaKnown RBP1.88□□□□□ -2.11
SEC3YER008C RAD55P38953 406 aa1.88□□□□□ -2.11
SEC3YER008C IRE1P32361 1115 aa1.88□□□□□ -2.11
SEC3YER008C MRT4P33201 236 aaKnown RBP1.88□□□□□ -2.11
SEC3YER008C MRPL16P38064 232 aa1.88□□□□□ -2.11
SEC3YER008C NCL1P38205 684 aaKnown RBP1.88□□□□□ -2.11
SEC3YER008C YJR008WP47085 338 aa1.88□□□□□ -2.11
SEC3YER008C YPK9Q12697 1472 aa1.88□□□□□ -2.11
SEC3YER008C KAP122P32767 1081 aa1.88□□□□□ -2.11
SEC3YER008C SQT1P35184 431 aa1.88□□□□□ -2.11
SEC3YER008C DYS1P38791 387 aa1.88□□□□□ -2.11
SEC3YER008C MSB3P48566 633 aaPredicted RBP1.88□□□□□ -2.11
SEC3YER008C KRE33P53914 1056 aaKnown RBP1.88□□□□□ -2.11
SEC3YER008C OYE2Q03558 400 aaKnown RBP1.88□□□□□ -2.11
SEC3YER008C SCC2Q04002 1493 aa1.88□□□□□ -2.11
SEC3YER008C FPS1P23900 669 aa1.88□□□□□ -2.11
SEC3YER008C SMC1P32908 1225 aa1.88□□□□□ -2.11
SEC3YER008C SCD5P34758 872 aa1.88□□□□□ -2.11
SEC3YER008C MON1P53129 644 aa1.88□□□□□ -2.11
SEC3YER008C RPO31P04051 1460 aa1.87□□□□□ -2.11
SEC3YER008C YBR197CP38306 217 aa1.87□□□□□ -2.11
SEC3YER008C BOL3P39724 118 aa1.87□□□□□ -2.11
SEC3YER008C RSM26P47141 266 aa1.87□□□□□ -2.11
SEC3YER008C SNU71P53207 620 aaKnown RBP1.87□□□□□ -2.11
SEC3YER008C XRN1P22147 1528 aaKnown RBP1.87□□□□□ -2.11
SEC3YER008C SPC42P36094 363 aa1.87□□□□□ -2.11
SEC3YER008C AIM46P38885 310 aa1.87□□□□□ -2.11
SEC3YER008C ADE12P80210 433 aaKnown RBP1.87□□□□□ -2.11
SEC3YER008C URN1Q06525 465 aaKnown RBP1.87□□□□□ -2.11
SEC3YER008C RKR1Q04781 1562 aa1.87□□□□□ -2.11
SEC3YER008C HEM3P28789 327 aa1.87□□□□□ -2.11
SEC3YER008C JJJ2P46997 583 aa1.87□□□□□ -2.11
SEC3YER008C AIM44Q99299 758 aa1.87□□□□□ -2.11
SEC3YER008C ECM5Q03214 1411 aa1.86□□□□□ -2.11
SEC3YER008C SPO14P36126 1683 aa1.86□□□□□ -2.11
SEC3YER008C CIC1P38779 376 aaKnown RBP1.86□□□□□ -2.11
SEC3YER008C NEO1P40527 1151 aa1.86□□□□□ -2.11
SEC3YER008C HXT8P40886 569 aa1.86□□□□□ -2.11
SEC3YER008C NOC3Q07896 663 aaPredicted RBP1.86□□□□□ -2.11
SEC3YER008C DED1P06634 604 aaKnown RBP1.86□□□□□ -2.11
SEC3YER008C MRPL33P20084 86 aa1.86□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 81.2 ms