RNA–Protein interactions for RNA: YEL005C

VAB2, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene VAB2, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAB2YEL005C SWI5P08153 709 aa5.62□□□□□ -1.51
VAB2YEL005C SSA1P10591 642 aaKnown RBP5.62□□□□□ -1.51
VAB2YEL005C TTI1P36097 1038 aa5.62□□□□□ -1.51
VAB2YEL005C CBC2Q08920 208 aaKnown RBP RIP-Chip data5.62□□□□□ -1.51not detected
VAB2YEL005C ELM1P32801 640 aa5.61□□□□□ -1.51
VAB2YEL005C TOS1P38288 455 aa5.61□□□□□ -1.51
VAB2YEL005C RPL34AP87262 121 aaPredicted RBP5.61□□□□□ -1.51
VAB2YEL005C UTP13Q05946 817 aaKnown RBP5.61□□□□□ -1.51
VAB2YEL005C SUB2Q07478 446 aaKnown RBP5.61□□□□□ -1.51
VAB2YEL005C YLR122CQ12312 125 aa5.61□□□□□ -1.51
VAB2YEL005C COQ2P32378 372 aa5.6□□□□□ -1.51
VAB2YEL005C KAE1P36132 386 aa5.6□□□□□ -1.51
VAB2YEL005C KTR7P40504 517 aa5.59□□□□□ -1.51
VAB2YEL005C HEH2Q03281 663 aa5.59□□□□□ -1.51
VAB2YEL005C MRX10Q05648 414 aa5.59□□□□□ -1.51
VAB2YEL005C MLF3P32047 452 aa5.58□□□□□ -1.52
VAB2YEL005C PUB1P32588 453 aaKnown RBP RIP-Chip data5.58□□□□□ -1.52not detected
VAB2YEL005C YTA6P40328 754 aa5.58□□□□□ -1.52
VAB2YEL005C SFA1P32771 386 aa5.56□□□□□ -1.52
VAB2YEL005C GEF1P37020 779 aa5.56□□□□□ -1.52
VAB2YEL005C BRE4Q07660 1125 aa5.56□□□□□ -1.52
VAB2YEL005C TGL4P36165 910 aa5.55□□□□□ -1.52
VAB2YEL005C RDS2P19541 446 aaKnown RBP5.54□□□□□ -1.52
VAB2YEL005C NGR1P32831 672 aaKnown RBP5.54□□□□□ -1.52
VAB2YEL005C ECM23Q02710 187 aa5.54□□□□□ -1.52
VAB2YEL005C Q0182Q9ZZW1 134 aa5.54□□□□□ -1.52
VAB2YEL005C MCM1P11746 286 aa5.53□□□□□ -1.52
VAB2YEL005C AIM9P40053 627 aaKnown RBP5.53□□□□□ -1.52
VAB2YEL005C YGR130CP53278 816 aa5.53□□□□□ -1.52
VAB2YEL005C RPS6AP0CX37 236 aaKnown RBP5.52□□□□□ -1.53
VAB2YEL005C RPS6BP0CX38 236 aaPredicted RBP5.52□□□□□ -1.53
VAB2YEL005C NAB2P32505 525 aaKnown RBP RIP-Chip data5.52□□□□□ -1.53 RIP-Chip
VAB2YEL005C UBP5P39944 805 aa5.52□□□□□ -1.53
VAB2YEL005C YFL034WP43564 1073 aa5.52□□□□□ -1.53
VAB2YEL005C GAL2P13181 574 aa5.51□□□□□ -1.53
VAB2YEL005C HAP4P14064 554 aa5.51□□□□□ -1.53
VAB2YEL005C PUP1P25043 261 aa5.51□□□□□ -1.53
VAB2YEL005C RNQ1P25367 405 aa5.51□□□□□ -1.53
VAB2YEL005C PEP12P32854 288 aa5.51□□□□□ -1.53
VAB2YEL005C MTO1P53070 669 aa5.51□□□□□ -1.53
VAB2YEL005C PHO87P25360 923 aa5.5□□□□□ -1.53
VAB2YEL005C NCL1P38205 684 aaKnown RBP5.5□□□□□ -1.53
VAB2YEL005C UBX7P38349 436 aa5.5□□□□□ -1.53
VAB2YEL005C MAG2Q06436 670 aaKnown RBP5.5□□□□□ -1.53
VAB2YEL005C NOB1Q08444 459 aaKnown RBP5.5□□□□□ -1.53
VAB2YEL005C MRP10O75012 95 aa5.49□□□□□ -1.53
VAB2YEL005C SAF1P38352 637 aa5.48□□□□□ -1.53
VAB2YEL005C YML083CQ04526 418 aa5.48□□□□□ -1.53
VAB2YEL005C TSC13Q99190 310 aa5.48□□□□□ -1.53
VAB2YEL005C PDI1P17967 522 aaKnown RBP5.47□□□□□ -1.53
VAB2YEL005C RSC6P25632 483 aa5.47□□□□□ -1.53
VAB2YEL005C SKP1P52286 194 aa5.47□□□□□ -1.53
VAB2YEL005C YNR040WP53736 256 aa5.47□□□□□ -1.53
VAB2YEL005C CHS2P14180 963 aa5.46□□□□□ -1.54
VAB2YEL005C NTH2P35172 780 aa5.46□□□□□ -1.54
VAB2YEL005C CUS1Q02554 436 aaPredicted RBP5.46□□□□□ -1.54
VAB2YEL005C GAS4Q08271 471 aa5.46□□□□□ -1.54
VAB2YEL005C NAM7P30771 971 aaKnown RBP5.45□□□□□ -1.54
VAB2YEL005C CDC3P32457 520 aaKnown RBP5.45□□□□□ -1.54
VAB2YEL005C AKR1P39010 764 aa5.45□□□□□ -1.54
VAB2YEL005C CYC7P00045 113 aa5.44□□□□□ -1.54
VAB2YEL005C VAN1P23642 535 aa5.44□□□□□ -1.54
VAB2YEL005C ACS2P52910 683 aaKnown RBP5.44□□□□□ -1.54
VAB2YEL005C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.43□□□□□ -1.54not detected
VAB2YEL005C TY1A-NL1Q12391 440 aaKnown RBP5.43□□□□□ -1.54
VAB2YEL005C TRS33Q99394 268 aa5.43□□□□□ -1.54
VAB2YEL005C SEA4P38164 1038 aa5.42□□□□□ -1.54
VAB2YEL005C CWH41P53008 833 aa5.42□□□□□ -1.54
VAB2YEL005C PUF6Q04373 656 aaKnown RBP5.42□□□□□ -1.54
VAB2YEL005C ROM1P53046 1155 aa5.41□□□□□ -1.54
VAB2YEL005C CYT1P07143 309 aa5.4□□□□□ -1.54
VAB2YEL005C YCR015CP25616 317 aa5.4□□□□□ -1.54
VAB2YEL005C YKL222CP35995 705 aa5.4□□□□□ -1.54
VAB2YEL005C APM2P38700 605 aa5.4□□□□□ -1.54
VAB2YEL005C TED1P40533 473 aa5.4□□□□□ -1.54
VAB2YEL005C PUN1Q06991 263 aa5.4□□□□□ -1.54
VAB2YEL005C TY4B-PA0A0B7P3V8 1104 aa5.39□□□□□ -1.55
VAB2YEL005C SEG2P34250 1132 aa5.39□□□□□ -1.55
VAB2YEL005C SPO74P45819 413 aa5.39□□□□□ -1.55
VAB2YEL005C SLP1Q12232 587 aa5.39□□□□□ -1.55
VAB2YEL005C TY4A-HQ6Q5P6 413 aa5.39□□□□□ -1.55
VAB2YEL005C IDI1P15496 288 aa5.38□□□□□ -1.55
VAB2YEL005C SLD2P34252 453 aa5.38□□□□□ -1.55
VAB2YEL005C YML020WQ03722 664 aa5.38□□□□□ -1.55
VAB2YEL005C HAT1Q12341 374 aa5.38□□□□□ -1.55
VAB2YEL005C FUR4P05316 633 aaKnown RBP5.37□□□□□ -1.55
VAB2YEL005C KAP122P32767 1081 aa5.37□□□□□ -1.55
VAB2YEL005C LRG1P35688 1017 aa5.37□□□□□ -1.55
VAB2YEL005C KAR5Q04746 504 aa5.37□□□□□ -1.55
VAB2YEL005C SRS2P12954 1174 aa5.36□□□□□ -1.55
VAB2YEL005C RRN6P32786 894 aa5.36□□□□□ -1.55
VAB2YEL005C PNP1Q05788 311 aa5.36□□□□□ -1.55
VAB2YEL005C REC8Q12188 680 aa5.36□□□□□ -1.55
VAB2YEL005C UBP1P25037 809 aa5.35□□□□□ -1.55
VAB2YEL005C UTP4Q06679 776 aaKnown RBP5.35□□□□□ -1.55
VAB2YEL005C RPC31P17890 251 aa5.34□□□□□ -1.55
VAB2YEL005C GIP2P40036 548 aa5.34□□□□□ -1.55
VAB2YEL005C GIS1Q03833 894 aa5.34□□□□□ -1.55
VAB2YEL005C ALD4P46367 519 aaKnown RBP5.33□□□□□ -1.56
VAB2YEL005C SDH1Q00711 640 aa5.33□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms