RNA–Protein interactions for RNA: YDR511W

SDH7, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeast

Gene SDH7, Length 402 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SDH7	YDR511W	YMR187C	Q03236	431 aa		4.8	□□□□□ -1.64
SDH7	YDR511W	SSA4	P22202	642 aa	Known RBP	4.79	□□□□□ -1.64
SDH7	YDR511W	MCX1	P38323	520 aa	Predicted RBP	4.79	□□□□□ -1.64
SDH7	YDR511W	QDR2	P40474	542 aa		4.79	□□□□□ -1.64
SDH7	YDR511W	FOX2	Q02207	900 aa	Known RBP	4.79	□□□□□ -1.64
SDH7	YDR511W	CAB1	Q04430	367 aa		4.79	□□□□□ -1.64
SDH7	YDR511W	RPC31	P17890	251 aa		4.78	□□□□□ -1.64
SDH7	YDR511W	APM2	P38700	605 aa		4.78	□□□□□ -1.64
SDH7	YDR511W	CCT8	P47079	568 aa	Known RBP	4.78	□□□□□ -1.64
SDH7	YDR511W	PRK1	P40494	810 aa		4.77	□□□□□ -1.65
SDH7	YDR511W	PUF6	Q04373	656 aa	Known RBP	4.77	□□□□□ -1.65
SDH7	YDR511W	MRPL33	P20084	86 aa		4.76	□□□□□ -1.65
SDH7	YDR511W	VMA3	P25515	160 aa		4.76	□□□□□ -1.65
SDH7	YDR511W	YBR197C	P38306	217 aa		4.76	□□□□□ -1.65
SDH7	YDR511W	SKN7	P38889	622 aa		4.76	□□□□□ -1.65
SDH7	YDR511W	ALD4	P46367	519 aa	Known RBP	4.76	□□□□□ -1.65
SDH7	YDR511W	YNR040W	P53736	256 aa		4.76	□□□□□ -1.65
SDH7	YDR511W	YML083C	Q04526	418 aa		4.76	□□□□□ -1.65
SDH7	YDR511W	PUN1	Q06991	263 aa		4.76	□□□□□ -1.65
SDH7	YDR511W	DYS1	P38791	387 aa		4.75	□□□□□ -1.65
SDH7	YDR511W	NOB1	Q08444	459 aa	Known RBP	4.75	□□□□□ -1.65
SDH7	YDR511W	YCK2	P23292	546 aa	Known RBP	4.74	□□□□□ -1.65
SDH7	YDR511W	ISC10	P32645	267 aa		4.74	□□□□□ -1.65
SDH7	YDR511W	YDR215C	Q12240	137 aa		4.74	□□□□□ -1.65
SDH7	YDR511W	SRS2	P12954	1174 aa		4.73	□□□□□ -1.65
SDH7	YDR511W	PGM2	P37012	569 aa	Known RBP	4.73	□□□□□ -1.65
SDH7	YDR511W	LDH1	P38139	375 aa		4.73	□□□□□ -1.65
SDH7	YDR511W	ALG14	P38242	237 aa		4.73	□□□□□ -1.65
SDH7	YDR511W	YOR296W	Q08748	1289 aa		4.73	□□□□□ -1.65
SDH7	YDR511W	NHA1	Q99271	985 aa		4.73	□□□□□ -1.65
SDH7	YDR511W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.72	□□□□□ -1.65	not detected
SDH7	YDR511W	SLN1	P39928	1220 aa	Predicted RBP	4.72	□□□□□ -1.65
SDH7	YDR511W	ITC1	P53125	1264 aa		4.72	□□□□□ -1.65
SDH7	YDR511W	CWC15	Q03772	175 aa	Known RBP	4.72	□□□□□ -1.65
SDH7	YDR511W	NAR1	P23503	491 aa	Known RBP	4.71	□□□□□ -1.66
SDH7	YDR511W	TAT1	P38085	619 aa		4.71	□□□□□ -1.66
SDH7	YDR511W	GIP1	P38229	639 aa		4.71	□□□□□ -1.66
SDH7	YDR511W	BSD2	P38356	321 aa		4.71	□□□□□ -1.66
SDH7	YDR511W	GIS4	Q04233	774 aa		4.71	□□□□□ -1.66
SDH7	YDR511W	RLF2	Q12495	606 aa		4.71	□□□□□ -1.66
SDH7	YDR511W	IDI1	P15496	288 aa		4.7	□□□□□ -1.66
SDH7	YDR511W	ISW1	P38144	1129 aa		4.7	□□□□□ -1.66
SDH7	YDR511W	TPS3	P38426	1054 aa	Known RBP	4.7	□□□□□ -1.66
SDH7	YDR511W	YER156C	P40093	338 aa	Known RBP	4.7	□□□□□ -1.66
SDH7	YDR511W	PRY1	P47032	299 aa		4.7	□□□□□ -1.66
SDH7	YDR511W	PNP1	Q05788	311 aa		4.69	□□□□□ -1.66
SDH7	YDR511W	MRP10	O75012	95 aa		4.68	□□□□□ -1.66
SDH7	YDR511W	SBP1	P10080	294 aa	Known RBP	4.68	□□□□□ -1.66
SDH7	YDR511W	MCA1	Q08601	432 aa		4.68	□□□□□ -1.66
SDH7	YDR511W	MSN1	P22148	382 aa		4.67	□□□□□ -1.66
SDH7	YDR511W	RRN6	P32786	894 aa		4.67	□□□□□ -1.66
SDH7	YDR511W	AMN1	P38285	549 aa	Predicted RBP	4.67	□□□□□ -1.66
SDH7	YDR511W	BUD9	P53226	547 aa		4.67	□□□□□ -1.66
SDH7	YDR511W	RSC2	Q06488	889 aa		4.67	□□□□□ -1.66
SDH7	YDR511W	SUB2	Q07478	446 aa	Known RBP	4.67	□□□□□ -1.66
SDH7	YDR511W	YBR287W	P38355	427 aa		4.66	□□□□□ -1.66
SDH7	YDR511W	FIR1	P40020	876 aa		4.66	□□□□□ -1.66
SDH7	YDR511W	YIL165C	P40446	119 aa		4.66	□□□□□ -1.66
SDH7	YDR511W	HXT8	P40886	569 aa		4.66	□□□□□ -1.66
SDH7	YDR511W	LSB6	P42951	607 aa		4.66	□□□□□ -1.66
SDH7	YDR511W	RRM3	P38766	723 aa		4.65	□□□□□ -1.67
SDH7	YDR511W	YJL181W	P46987	611 aa		4.65	□□□□□ -1.67
SDH7	YDR511W	SUT1	P53032	299 aa	Known RBP	4.65	□□□□□ -1.67
SDH7	YDR511W	PPT1	P53043	513 aa		4.65	□□□□□ -1.67
SDH7	YDR511W	SLP1	Q12232	587 aa		4.65	□□□□□ -1.67
SDH7	YDR511W	YPL034W	Q03083	165 aa		4.64	□□□□□ -1.67
SDH7	YDR511W	AI3	P03877	415 aa		4.63	□□□□□ -1.67
SDH7	YDR511W	FUR4	P05316	633 aa	Known RBP	4.63	□□□□□ -1.67
SDH7	YDR511W	BOI1	P38041	980 aa	Known RBP	4.63	□□□□□ -1.67
SDH7	YDR511W	AIM46	P38885	310 aa		4.63	□□□□□ -1.67
SDH7	YDR511W	SOK2	P53438	785 aa	Predicted RBP	4.63	□□□□□ -1.67
SDH7	YDR511W	EMG1	Q06287	252 aa	Known RBP	4.63	□□□□□ -1.67
SDH7	YDR511W	GAS5	Q08193	484 aa		4.63	□□□□□ -1.67
SDH7	YDR511W	APC11	Q12157	165 aa		4.63	□□□□□ -1.67
SDH7	YDR511W	LSO1	Q3E827	93 aa		4.63	□□□□□ -1.67
SDH7	YDR511W	RPB10	P22139	70 aa		4.62	□□□□□ -1.67
SDH7	YDR511W	KTR2	P33550	425 aa		4.62	□□□□□ -1.67
SDH7	YDR511W	GIP2	P40036	548 aa		4.62	□□□□□ -1.67
SDH7	YDR511W	TED1	P40533	473 aa		4.62	□□□□□ -1.67
SDH7	YDR511W	RGD2	P43556	714 aa		4.62	□□□□□ -1.67
SDH7	YDR511W	SAC7	P17121	654 aa		4.61	□□□□□ -1.67
SDH7	YDR511W	SFA1	P32771	386 aa		4.61	□□□□□ -1.67
SDH7	YDR511W	BOL3	P39724	118 aa		4.61	□□□□□ -1.67
SDH7	YDR511W	NTA1	P40354	457 aa		4.61	□□□□□ -1.67
SDH7	YDR511W	INP51	P40559	946 aa	Known RBP	4.61	□□□□□ -1.67
SDH7	YDR511W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.61	□□□□□ -1.67	not detected
SDH7	YDR511W	RPL34A	P87262	121 aa	Predicted RBP	4.61	□□□□□ -1.67
SDH7	YDR511W	TY4B-P	A0A0B7P3V8	1104 aa		4.6	□□□□□ -1.67
SDH7	YDR511W	SMC1	P32908	1225 aa		4.6	□□□□□ -1.67
SDH7	YDR511W	RAD55	P38953	406 aa		4.6	□□□□□ -1.67
SDH7	YDR511W	ARI1	P53111	347 aa	Known RBP	4.6	□□□□□ -1.67
SDH7	YDR511W	TY4A-H	Q6Q5P6	413 aa		4.6	□□□□□ -1.67
SDH7	YDR511W	RSC6	P25632	483 aa		4.58	□□□□□ -1.68
SDH7	YDR511W	BIO5	P53744	561 aa	Known RBP	4.58	□□□□□ -1.68
SDH7	YDR511W	TIF6	Q12522	245 aa	Known RBP	4.58	□□□□□ -1.68
SDH7	YDR511W	FUS1	P11710	512 aa		4.57	□□□□□ -1.68
SDH7	YDR511W	IRS4	P36115	615 aa	Known RBP	4.57	□□□□□ -1.68
SDH7	YDR511W	PSY2	P40164	858 aa		4.57	□□□□□ -1.68
SDH7	YDR511W	GUP1	P53154	560 aa		4.57	□□□□□ -1.68
SDH7	YDR511W	DSE4	P53753	1117 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 34 ms