RNA–Protein interactions for RNA: YDR499W

LCD1, Transcript of Essential protein required for the DNA integrity checkpoint pathways, yeastyeast

Gene LCD1, Length 2,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCD1YDR499W CPS1P27614 576 aa3.55□□□□□ -1.84
LCD1YDR499W NCL1P38205 684 aaKnown RBP3.55□□□□□ -1.84
LCD1YDR499W PRK1P40494 810 aa3.55□□□□□ -1.84
LCD1YDR499W HEH2Q03281 663 aa3.55□□□□□ -1.84
LCD1YDR499W UTP4Q06679 776 aaKnown RBP3.55□□□□□ -1.84
LCD1YDR499W TAT1P38085 619 aa3.55□□□□□ -1.84
LCD1YDR499W UBX7P38349 436 aa3.55□□□□□ -1.84
LCD1YDR499W QDR2P40474 542 aa3.55□□□□□ -1.84
LCD1YDR499W YNR040WP53736 256 aa3.55□□□□□ -1.84
LCD1YDR499W FOX2Q02207 900 aaKnown RBP3.55□□□□□ -1.84
LCD1YDR499W PGM2P37012 569 aaKnown RBP3.54□□□□□ -1.84
LCD1YDR499W ALG14P38242 237 aa3.54□□□□□ -1.84
LCD1YDR499W SKP1P52286 194 aa3.54□□□□□ -1.84
LCD1YDR499W CWH41P53008 833 aa3.54□□□□□ -1.84
LCD1YDR499W NRD1P53617 575 aaKnown RBP RIP-Chip data3.54□□□□□ -1.84not detected
LCD1YDR499W TRS33Q99394 268 aa3.54□□□□□ -1.84
LCD1YDR499W SUV3P32580 737 aa3.53□□□□□ -1.84
LCD1YDR499W AMN1P38285 549 aaPredicted RBP3.53□□□□□ -1.84
LCD1YDR499W NHA1Q99271 985 aa3.53□□□□□ -1.84
LCD1YDR499W GLT1Q12680 2145 aaKnown RBP3.53□□□□□ -1.84
LCD1YDR499W APM2P38700 605 aa3.52□□□□□ -1.85
LCD1YDR499W CAB1Q04430 367 aa3.52□□□□□ -1.85
LCD1YDR499W RPC31P17890 251 aa3.52□□□□□ -1.85
LCD1YDR499W LSB6P42951 607 aa3.52□□□□□ -1.85
LCD1YDR499W NAR1P23503 491 aaKnown RBP3.51□□□□□ -1.85
LCD1YDR499W NAB2P32505 525 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
LCD1YDR499W MRP10O75012 95 aa3.51□□□□□ -1.85
LCD1YDR499W PUP1P25043 261 aa3.51□□□□□ -1.85
LCD1YDR499W TPS3P38426 1054 aaKnown RBP3.51□□□□□ -1.85
LCD1YDR499W VMA3P25515 160 aa3.5□□□□□ -1.85
LCD1YDR499W GIS4Q04233 774 aa3.5□□□□□ -1.85
LCD1YDR499W MRPL33P20084 86 aa3.5□□□□□ -1.85
LCD1YDR499W ITC1P53125 1264 aa3.5□□□□□ -1.85
LCD1YDR499W GAS5Q08193 484 aa3.5□□□□□ -1.85
LCD1YDR499W IDI1P15496 288 aa3.49□□□□□ -1.85
LCD1YDR499W YBR197CP38306 217 aa3.49□□□□□ -1.85
LCD1YDR499W BSD2P38356 321 aa3.49□□□□□ -1.85
LCD1YDR499W ALD4P46367 519 aaKnown RBP3.49□□□□□ -1.85
LCD1YDR499W BUD9P53226 547 aa3.49□□□□□ -1.85
LCD1YDR499W YPL034WQ03083 165 aa3.49□□□□□ -1.85
LCD1YDR499W PUN1Q06991 263 aa3.49□□□□□ -1.85
LCD1YDR499W ISC10P32645 267 aa3.48□□□□□ -1.85
LCD1YDR499W YML083CQ04526 418 aa3.48□□□□□ -1.85
LCD1YDR499W RRM3P38766 723 aa3.48□□□□□ -1.85
LCD1YDR499W DYS1P38791 387 aa3.48□□□□□ -1.85
LCD1YDR499W YOR296WQ08748 1289 aa3.48□□□□□ -1.85
LCD1YDR499W LDH1P38139 375 aa3.47□□□□□ -1.85
LCD1YDR499W GIP1P38229 639 aa3.47□□□□□ -1.85
LCD1YDR499W YJL181WP46987 611 aa3.47□□□□□ -1.85
LCD1YDR499W ALO1P54783 526 aaKnown RBP3.46□□□□□ -1.86
LCD1YDR499W MAC1P35192 417 aa3.45□□□□□ -1.86
LCD1YDR499W YER156CP40093 338 aaKnown RBP3.45□□□□□ -1.86
LCD1YDR499W TED1P40533 473 aa3.45□□□□□ -1.86
LCD1YDR499W AI3P03877 415 aa3.44□□□□□ -1.86
LCD1YDR499W ISW1P38144 1129 aa3.44□□□□□ -1.86
LCD1YDR499W PUF6Q04373 656 aaKnown RBP3.44□□□□□ -1.86
LCD1YDR499W NOB1Q08444 459 aaKnown RBP3.44□□□□□ -1.86
LCD1YDR499W SAC7P17121 654 aa3.44□□□□□ -1.86
LCD1YDR499W MSN1P22148 382 aa3.44□□□□□ -1.86
LCD1YDR499W SSA4P22202 642 aaKnown RBP3.44□□□□□ -1.86
LCD1YDR499W PPT1P53043 513 aa3.44□□□□□ -1.86
LCD1YDR499W SOK2P53438 785 aaPredicted RBP3.44□□□□□ -1.86
LCD1YDR499W SRS2P12954 1174 aa3.43□□□□□ -1.86
LCD1YDR499W GIP2P40036 548 aa3.43□□□□□ -1.86
LCD1YDR499W YIL165CP40446 119 aa3.42□□□□□ -1.86
LCD1YDR499W SUT1P53032 299 aaKnown RBP3.42□□□□□ -1.86
LCD1YDR499W CWC15Q03772 175 aaKnown RBP3.42□□□□□ -1.86
LCD1YDR499W RSC2Q06488 889 aa3.42□□□□□ -1.86
LCD1YDR499W OMA1P36163 345 aa3.42□□□□□ -1.86
LCD1YDR499W ARI1P53111 347 aaKnown RBP3.42□□□□□ -1.86
LCD1YDR499W PNP1Q05788 311 aa3.42□□□□□ -1.86
LCD1YDR499W SLP1Q12232 587 aa3.42□□□□□ -1.86
LCD1YDR499W TY4B-PA0A0B7P3V8 1104 aa3.41□□□□□ -1.86
LCD1YDR499W COQ2P32378 372 aa3.41□□□□□ -1.86
LCD1YDR499W SFA1P32771 386 aa3.41□□□□□ -1.86
LCD1YDR499W FIR1P40020 876 aa3.41□□□□□ -1.86
LCD1YDR499W HXT8P40886 569 aa3.41□□□□□ -1.86
LCD1YDR499W EMG1Q06287 252 aaKnown RBP3.41□□□□□ -1.86
LCD1YDR499W TY4A-HQ6Q5P6 413 aa3.41□□□□□ -1.86
LCD1YDR499W PGM1P33401 570 aaKnown RBP3.4□□□□□ -1.87
LCD1YDR499W BOI1P38041 980 aaKnown RBP3.4□□□□□ -1.87
LCD1YDR499W RPB10P22139 70 aa3.39□□□□□ -1.87
LCD1YDR499W RSC6P25632 483 aa3.39□□□□□ -1.87
LCD1YDR499W RRN6P32786 894 aa3.39□□□□□ -1.87
LCD1YDR499W AIM46P38885 310 aa3.39□□□□□ -1.87
LCD1YDR499W INP51P40559 946 aaKnown RBP3.39□□□□□ -1.87
LCD1YDR499W TY1A-NL1Q12391 440 aaKnown RBP3.39□□□□□ -1.87
LCD1YDR499W KTR2P33550 425 aa3.39□□□□□ -1.87
LCD1YDR499W AKR1P39010 764 aa3.39□□□□□ -1.87
LCD1YDR499W RGD2P43556 714 aa3.39□□□□□ -1.87
LCD1YDR499W PAN5P38787 379 aa3.38□□□□□ -1.87
LCD1YDR499W INP52P50942 1183 aa3.38□□□□□ -1.87
LCD1YDR499W TRP3P00937 484 aa3.38□□□□□ -1.87
LCD1YDR499W NAM7P30771 971 aaKnown RBP3.38□□□□□ -1.87
LCD1YDR499W KAE1P36132 386 aa3.38□□□□□ -1.87
LCD1YDR499W TFA2P36145 328 aa3.38□□□□□ -1.87
LCD1YDR499W YBR287WP38355 427 aa3.38□□□□□ -1.87
LCD1YDR499W ALD3P54114 506 aa3.38□□□□□ -1.87
LCD1YDR499W YLR122CQ12312 125 aa3.38□□□□□ -1.87
LCD1YDR499W BIO5P53744 561 aaKnown RBP3.37□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 81.8 ms