RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W TAP42Q04372 366 aa1.72□□□□□ -2.13
SPC110YDR356W COG4Q06096 861 aa1.72□□□□□ -2.13
SPC110YDR356W GGA1Q06336 557 aa1.72□□□□□ -2.13
SPC110YDR356W BRE1Q07457 700 aaKnown RBP1.72□□□□□ -2.13
SPC110YDR356W THI13Q07748 340 aa1.72□□□□□ -2.13
SPC110YDR356W YOL098CQ12496 1037 aa1.72□□□□□ -2.13
SPC110YDR356W TUS1Q06412 1307 aa1.71□□□□□ -2.14
SPC110YDR356W CDC31P06704 161 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W KEX1P09620 729 aa1.71□□□□□ -2.14
SPC110YDR356W CDC10P25342 322 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W GCD11P32481 527 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W RRN6P32786 894 aa1.71□□□□□ -2.14
SPC110YDR356W MRS6P32864 603 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W STM1P39015 273 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W VPS70P47161 811 aa1.71□□□□□ -2.14
SPC110YDR356W GIM3P53900 129 aa1.71□□□□□ -2.14
SPC110YDR356W TIM50Q02776 476 aa1.71□□□□□ -2.14
SPC110YDR356W YMR018WQ04364 514 aa1.71□□□□□ -2.14
SPC110YDR356W UTP14Q04500 899 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W KAR5Q04746 504 aa1.71□□□□□ -2.14
SPC110YDR356W TSR1Q07381 788 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W YOR389WQ08912 624 aa1.71□□□□□ -2.14
SPC110YDR356W SFI1Q12369 946 aa1.71□□□□□ -2.14
SPC110YDR356W CYB2P00175 591 aa1.71□□□□□ -2.14
SPC110YDR356W MIC60P36112 540 aa1.71□□□□□ -2.14
SPC110YDR356W SAP190P36123 1033 aa1.71□□□□□ -2.14
SPC110YDR356W YJR142WP47173 342 aa1.71□□□□□ -2.14
SPC110YDR356W PSD2P53037 1138 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W NNF2P53253 936 aa1.71□□□□□ -2.14
SPC110YDR356W YNR021WP53723 404 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W ALD3P54114 506 aa1.71□□□□□ -2.14
SPC110YDR356W RRP17Q04031 235 aaPredicted RBP1.71□□□□□ -2.14
SPC110YDR356W HEL2Q05580 639 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W YLR352WQ06479 807 aa1.71□□□□□ -2.14
SPC110YDR356W MAK21Q12176 1025 aaKnown RBP1.71□□□□□ -2.14
SPC110YDR356W NKP1Q12493 238 aa1.71□□□□□ -2.14
SPC110YDR356W SSA2P10592 639 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W HIR2P32480 875 aa1.7□□□□□ -2.14
SPC110YDR356W YKL100CP34248 587 aa1.7□□□□□ -2.14
SPC110YDR356W YRO2P38079 344 aa1.7□□□□□ -2.14
SPC110YDR356W MGE1P38523 228 aa1.7□□□□□ -2.14
SPC110YDR356W EPL1P43572 832 aa1.7□□□□□ -2.14
SPC110YDR356W DAS1P47005 663 aa1.7□□□□□ -2.14
SPC110YDR356W OCA1P50946 238 aaPredicted RBP1.7□□□□□ -2.14
SPC110YDR356W RNH70P53331 553 aa1.7□□□□□ -2.14
SPC110YDR356W CWC22P53333 577 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W CWC24P53769 259 aa1.7□□□□□ -2.14
SPC110YDR356W DSL1P53847 754 aa1.7□□□□□ -2.14
SPC110YDR356W JIP5Q06214 492 aaPredicted RBP1.7□□□□□ -2.14
SPC110YDR356W NOC3Q07896 663 aaPredicted RBP1.7□□□□□ -2.14
SPC110YDR356W PSK2Q08217 1101 aa1.7□□□□□ -2.14
SPC110YDR356W TYW1Q08960 810 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W SMC4Q12267 1418 aa1.7□□□□□ -2.14
SPC110YDR356W VMA2P16140 517 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W YEF3P16521 1044 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W KAR3P17119 729 aa1.7□□□□□ -2.14
SPC110YDR356W ACE2P21192 770 aa1.7□□□□□ -2.14
SPC110YDR356W VPS1P21576 704 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W VMA4P22203 233 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W PRE8P23639 250 aa1.7□□□□□ -2.14
SPC110YDR356W PKC1P24583 1151 aa1.7□□□□□ -2.14
SPC110YDR356W RPL5P26321 297 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W SMY1P32364 656 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W LTV1P34078 463 aa1.7□□□□□ -2.14
SPC110YDR356W ASH1P34233 588 aa1.7□□□□□ -2.14
SPC110YDR356W PMC1P38929 1173 aaPredicted RBP1.7□□□□□ -2.14
SPC110YDR356W YTA6P40328 754 aa1.7□□□□□ -2.14
SPC110YDR356W SDS3P40505 327 aa1.7□□□□□ -2.14
SPC110YDR356W DJP1P40564 432 aa1.7□□□□□ -2.14
SPC110YDR356W ALD4P46367 519 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W YNR063WP53749 607 aa1.7□□□□□ -2.14
SPC110YDR356W VPS30Q02948 557 aa1.7□□□□□ -2.14
SPC110YDR356W PHM6Q05637 104 aa1.7□□□□□ -2.14
SPC110YDR356W YDL176WQ12027 708 aa1.7□□□□□ -2.14
SPC110YDR356W RTC5Q12108 567 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W WRS1Q12109 432 aaKnown RBP1.7□□□□□ -2.14
SPC110YDR356W CEX1Q12453 761 aa1.7□□□□□ -2.14
SPC110YDR356W STH1P32597 1359 aa1.69□□□□□ -2.14
SPC110YDR356W PWP1P21304 576 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W PSE1P32337 1089 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W SFP1P32432 683 aa1.69□□□□□ -2.14
SPC110YDR356W TBS1P38114 1094 aa1.69□□□□□ -2.14
SPC110YDR356W ETP1P38748 585 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W YAP1801P38856 637 aa1.69□□□□□ -2.14
SPC110YDR356W POL5P39985 1022 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W DOT6P40059 670 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W PXA1P41909 870 aa1.69□□□□□ -2.14
SPC110YDR356W BTN2P53286 410 aa1.69□□□□□ -2.14
SPC110YDR356W ADA2Q02336 434 aa1.69□□□□□ -2.14
SPC110YDR356W VTC3Q02725 835 aa1.69□□□□□ -2.14
SPC110YDR356W ERV41Q04651 352 aa1.69□□□□□ -2.14
SPC110YDR356W NOP12Q08208 459 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W MRN1Q08925 612 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
SPC110YDR356W YLL054CQ12244 843 aa1.69□□□□□ -2.14
SPC110YDR356W BUD4P47136 1447 aa1.69□□□□□ -2.14
SPC110YDR356W TOM70P07213 617 aaKnown RBP1.69□□□□□ -2.14
SPC110YDR356W HMG1P12683 1054 aa1.69□□□□□ -2.14
SPC110YDR356W MRPL40P36534 297 aa1.69□□□□□ -2.14
SPC110YDR356W SLX1P38324 304 aa1.69□□□□□ -2.14
SPC110YDR356W RIM11P38615 370 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 50.3 ms