RNA–Protein interactions for RNA: YDR350C

ATP22, Specific translational activator for the mitochondrial ATP6 mRNA, yeast

Gene ATP22, Length 2,055 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ATP22	YDR350C	ATG1	P53104	897 aa		4.25	□□□□□ -1.73
ATP22	YDR350C	TY1A-MR1	Q04215	440 aa		4.25	□□□□□ -1.73
ATP22	YDR350C	NUT2	Q06213	157 aa		4.25	□□□□□ -1.73
ATP22	YDR350C	RPP2B	P02400	110 aa	Known RBP	4.24	□□□□□ -1.73
ATP22	YDR350C	SLD2	P34252	453 aa		4.24	□□□□□ -1.73
ATP22	YDR350C	BSD2	P38356	321 aa		4.24	□□□□□ -1.73
ATP22	YDR350C	SPR3	P41901	512 aa		4.24	□□□□□ -1.73
ATP22	YDR350C	RGD2	P43556	714 aa		4.24	□□□□□ -1.73
ATP22	YDR350C	ROG3	P43602	733 aa		4.24	□□□□□ -1.73
ATP22	YDR350C	UBP2	Q01476	1272 aa		4.24	□□□□□ -1.73
ATP22	YDR350C	FUR4	P05316	633 aa	Known RBP	4.23	□□□□□ -1.73
ATP22	YDR350C	SCD5	P34758	872 aa		4.23	□□□□□ -1.73
ATP22	YDR350C	CWH41	P53008	833 aa		4.23	□□□□□ -1.73
ATP22	YDR350C	SCW11	P53189	542 aa		4.23	□□□□□ -1.73
ATP22	YDR350C	UTP4	Q06679	776 aa	Known RBP	4.23	□□□□□ -1.73
ATP22	YDR350C	MSN1	P22148	382 aa		4.23	□□□□□ -1.73
ATP22	YDR350C	KAP122	P32767	1081 aa		4.23	□□□□□ -1.73
ATP22	YDR350C	YHL050C	P38721	697 aa		4.23	□□□□□ -1.73
ATP22	YDR350C	YHR219W	P38900	624 aa		4.23	□□□□□ -1.73
ATP22	YDR350C	UBP15	P50101	1230 aa		4.23	□□□□□ -1.73
ATP22	YDR350C	CAF120	P53836	1060 aa		4.23	□□□□□ -1.73
ATP22	YDR350C	MRPL16	P38064	232 aa		4.22	□□□□□ -1.73
ATP22	YDR350C	MSC7	P38694	644 aa		4.22	□□□□□ -1.73
ATP22	YDR350C	SUT1	P53032	299 aa	Known RBP	4.22	□□□□□ -1.73
ATP22	YDR350C	MTO1	P53070	669 aa		4.22	□□□□□ -1.73
ATP22	YDR350C	CUZ1	P53899	274 aa		4.22	□□□□□ -1.73
ATP22	YDR350C	RGP1	P16664	663 aa		4.22	□□□□□ -1.73
ATP22	YDR350C	AHP1	P38013	176 aa	Known RBP	4.22	□□□□□ -1.73
ATP22	YDR350C	ACF4	P47129	309 aa		4.22	□□□□□ -1.73
ATP22	YDR350C	SKP1	P52286	194 aa		4.22	□□□□□ -1.73
ATP22	YDR350C	ITC1	P53125	1264 aa		4.22	□□□□□ -1.73
ATP22	YDR350C	CUS1	Q02554	436 aa	Predicted RBP	4.22	□□□□□ -1.73
ATP22	YDR350C	TOS4	Q06266	489 aa		4.22	□□□□□ -1.73
ATP22	YDR350C	MRP10	O75012	95 aa		4.21	□□□□□ -1.74
ATP22	YDR350C	GAR1	P28007	205 aa	Known RBP	4.21	□□□□□ -1.74
ATP22	YDR350C	ATG36	P46983	293 aa		4.21	□□□□□ -1.74
ATP22	YDR350C	YTA7	P40340	1379 aa		4.2	□□□□□ -1.74
ATP22	YDR350C	MET4	P32389	672 aa		4.2	□□□□□ -1.74
ATP22	YDR350C	DUR3	P33413	735 aa		4.2	□□□□□ -1.74
ATP22	YDR350C	CTR9	P89105	1077 aa		4.2	□□□□□ -1.74
ATP22	YDR350C	MSC6	Q08818	692 aa	Known RBP	4.2	□□□□□ -1.74
ATP22	YDR350C	STB3	Q12427	513 aa		4.2	□□□□□ -1.74
ATP22	YDR350C	COB	P00163	385 aa		4.2	□□□□□ -1.74
ATP22	YDR350C	SPC42	P36094	363 aa		4.2	□□□□□ -1.74
ATP22	YDR350C	YLR346C	Q06139	101 aa		4.2	□□□□□ -1.74
ATP22	YDR350C	EMG1	Q06287	252 aa	Known RBP	4.2	□□□□□ -1.74
ATP22	YDR350C	MAG2	Q06436	670 aa	Known RBP	4.2	□□□□□ -1.74
ATP22	YDR350C	HXT8	P40886	569 aa		4.19	□□□□□ -1.74
ATP22	YDR350C	TIF6	Q12522	245 aa	Known RBP	4.19	□□□□□ -1.74
ATP22	YDR350C	DIT1	P21623	536 aa		4.18	□□□□□ -1.74
ATP22	YDR350C	TRS120	Q04183	1289 aa		4.18	□□□□□ -1.74
ATP22	YDR350C	LDH1	P38139	375 aa		4.18	□□□□□ -1.74
ATP22	YDR350C	YOR296W	Q08748	1289 aa		4.18	□□□□□ -1.74
ATP22	YDR350C	RGA1	P39083	1007 aa		4.17	□□□□□ -1.74
ATP22	YDR350C	SYT1	Q06836	1226 aa		4.17	□□□□□ -1.74
ATP22	YDR350C	DYS1	P38791	387 aa		4.16	□□□□□ -1.74
ATP22	YDR350C	KRE33	P53914	1056 aa	Known RBP	4.16	□□□□□ -1.74
ATP22	YDR350C	FAR11	P53917	953 aa		4.16	□□□□□ -1.74
ATP22	YDR350C	RSC4	Q02206	625 aa		4.16	□□□□□ -1.74
ATP22	YDR350C	GIP1	P38229	639 aa		4.15	□□□□□ -1.74
ATP22	YDR350C	NTA1	P40354	457 aa		4.15	□□□□□ -1.74
ATP22	YDR350C	YIL165C	P40446	119 aa		4.15	□□□□□ -1.74
ATP22	YDR350C	ADE12	P80210	433 aa	Known RBP	4.15	□□□□□ -1.74
ATP22	YDR350C	TY1A-DR2	Q03964	440 aa	Known RBP	4.15	□□□□□ -1.74
ATP22	YDR350C	PHO4	P07270	312 aa	Known RBP	4.15	□□□□□ -1.75
ATP22	YDR350C	SEC8	P32855	1065 aa		4.15	□□□□□ -1.75
ATP22	YDR350C	APM2	P38700	605 aa		4.15	□□□□□ -1.75
ATP22	YDR350C	STM1	P39015	273 aa	Known RBP	4.15	□□□□□ -1.75
ATP22	YDR350C	POL32	P47110	350 aa		4.15	□□□□□ -1.75
ATP22	YDR350C	HPF1	Q05164	967 aa		4.15	□□□□□ -1.75
ATP22	YDR350C	IDI1	P15496	288 aa		4.14	□□□□□ -1.75
ATP22	YDR350C	PPX1	P38698	397 aa		4.14	□□□□□ -1.75
ATP22	YDR350C	YTA6	P40328	754 aa		4.14	□□□□□ -1.75
ATP22	YDR350C	YMR265C	Q03508	461 aa	Known RBP	4.14	□□□□□ -1.75
ATP22	YDR350C	RAD55	P38953	406 aa		4.14	□□□□□ -1.75
ATP22	YDR350C	PSY2	P40164	858 aa		4.14	□□□□□ -1.75
ATP22	YDR350C	YNL011C	P53980	444 aa		4.14	□□□□□ -1.75
ATP22	YDR350C	ISW1	P38144	1129 aa		4.13	□□□□□ -1.75
ATP22	YDR350C	PRK1	P40494	810 aa		4.13	□□□□□ -1.75
ATP22	YDR350C	YDR461C-A	Q2V2P7	80 aa		4.13	□□□□□ -1.75
ATP22	YDR350C	TFA2	P36145	328 aa		4.12	□□□□□ -1.75
ATP22	YDR350C	BRN1	P38170	754 aa		4.12	□□□□□ -1.75
ATP22	YDR350C	DAK2	P43550	591 aa		4.12	□□□□□ -1.75
ATP22	YDR350C	OYE2	Q03558	400 aa	Known RBP	4.12	□□□□□ -1.75
ATP22	YDR350C	IRS4	P36115	615 aa	Known RBP	4.12	□□□□□ -1.75
ATP22	YDR350C	DOS2	P54858	310 aa		4.12	□□□□□ -1.75
ATP22	YDR350C	UGA4	P32837	571 aa		4.11	□□□□□ -1.75
ATP22	YDR350C	LYS5	P50113	272 aa		4.11	□□□□□ -1.75
ATP22	YDR350C	CDC55	Q00362	526 aa		4.11	□□□□□ -1.75
ATP22	YDR350C	PYC2	P32327	1180 aa	Known RBP	4.1	□□□□□ -1.75
ATP22	YDR350C	YER156C	P40093	338 aa	Known RBP	4.1	□□□□□ -1.75
ATP22	YDR350C	YJR107W	P47145	328 aa		4.1	□□□□□ -1.75
ATP22	YDR350C	UFD2	P54860	961 aa		4.1	□□□□□ -1.75
ATP22	YDR350C	SEC20	P28791	383 aa		4.1	□□□□□ -1.75
ATP22	YDR350C	SMC1	P32908	1225 aa		4.1	□□□□□ -1.75
ATP22	YDR350C	MET1	P36150	593 aa		4.1	□□□□□ -1.75
ATP22	YDR350C	FYV10	P40492	516 aa		4.1	□□□□□ -1.75
ATP22	YDR350C	IOC3	P43596	787 aa		4.1	□□□□□ -1.75
ATP22	YDR350C	ALD3	P54114	506 aa		4.1	□□□□□ -1.75
ATP22	YDR350C	AIM46	P38885	310 aa		4.09	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 42.9 ms