RNA–Protein interactions for RNA: YDL216C

RRI1, Transcript of Catalytic subunit of the COP9 signalosome (CSN) complex, yeastyeast

Gene RRI1, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRI1YDL216C MLF3P32047 452 aa7.33□□□□□ -1.24
RRI1YDL216C YBR197CP38306 217 aa7.33□□□□□ -1.24
RRI1YDL216C SBE2P42223 864 aaKnown RBP7.33□□□□□ -1.24
RRI1YDL216C FOX2Q02207 900 aaKnown RBP7.33□□□□□ -1.24
RRI1YDL216C LSB3P43603 459 aaKnown RBP7.32□□□□□ -1.24
RRI1YDL216C KAR5Q04746 504 aa7.32□□□□□ -1.24
RRI1YDL216C RGP1P16664 663 aa7.31□□□□□ -1.24
RRI1YDL216C ISC10P32645 267 aa7.3□□□□□ -1.24
RRI1YDL216C BOL3P39724 118 aa7.29□□□□□ -1.24
RRI1YDL216C TY1A-DR2Q03964 440 aaKnown RBP7.29□□□□□ -1.24
RRI1YDL216C TDA6Q06466 467 aa7.29□□□□□ -1.24
RRI1YDL216C HAT1Q12341 374 aa7.29□□□□□ -1.24
RRI1YDL216C MRPL33P20084 86 aa7.28□□□□□ -1.24
RRI1YDL216C LSO1Q3E827 93 aa7.28□□□□□ -1.24
RRI1YDL216C MSC7P38694 644 aa7.27□□□□□ -1.25
RRI1YDL216C ATG1P53104 897 aa7.27□□□□□ -1.25
RRI1YDL216C YNR014WP53719 212 aa7.27□□□□□ -1.25
RRI1YDL216C YPR053CQ6Q5F3 151 aa7.27□□□□□ -1.25
RRI1YDL216C RPP1AP05318 106 aaPredicted RBP7.26□□□□□ -1.25
RRI1YDL216C PDC5P16467 563 aaKnown RBP7.26□□□□□ -1.25
RRI1YDL216C KNS1P32350 737 aaPredicted RBP7.26□□□□□ -1.25
RRI1YDL216C SSF1P38789 453 aaPredicted RBP7.26□□□□□ -1.25
RRI1YDL216C VMA3P25515 160 aa7.25□□□□□ -1.25
RRI1YDL216C KAP122P32767 1081 aa7.25□□□□□ -1.25
RRI1YDL216C DYS1P38791 387 aa7.25□□□□□ -1.25
RRI1YDL216C CCT8P47079 568 aaKnown RBP7.25□□□□□ -1.25
RRI1YDL216C MTO1P53070 669 aa7.25□□□□□ -1.25
RRI1YDL216C YMR187CQ03236 431 aa7.25□□□□□ -1.25
RRI1YDL216C QDR2P40474 542 aa7.24□□□□□ -1.25
RRI1YDL216C APC11Q12157 165 aa7.24□□□□□ -1.25
RRI1YDL216C YBL113CQ7M4S9 792 aa7.24□□□□□ -1.25
RRI1YDL216C LDH1P38139 375 aa7.23□□□□□ -1.25
RRI1YDL216C MCX1P38323 520 aaPredicted RBP7.23□□□□□ -1.25
RRI1YDL216C GLO3P38682 493 aaKnown RBP7.23□□□□□ -1.25
RRI1YDL216C BOI2P39969 1040 aa7.23□□□□□ -1.25
RRI1YDL216C BOI1P38041 980 aaKnown RBP7.22□□□□□ -1.25
RRI1YDL216C ERP5P38819 212 aa7.22□□□□□ -1.25
RRI1YDL216C SKN7P38889 622 aa7.22□□□□□ -1.25
RRI1YDL216C ACF4P47129 309 aa7.22□□□□□ -1.25
RRI1YDL216C TRL1P09880 827 aaKnown RBP7.21□□□□□ -1.26
RRI1YDL216C MET1P36150 593 aa7.21□□□□□ -1.26
RRI1YDL216C QDR1P40475 563 aa7.21□□□□□ -1.26
RRI1YDL216C SKP1P52286 194 aa7.21□□□□□ -1.26
RRI1YDL216C RPC31P17890 251 aa7.2□□□□□ -1.26
RRI1YDL216C HEH2Q03281 663 aa7.2□□□□□ -1.26
RRI1YDL216C YML020WQ03722 664 aa7.2□□□□□ -1.26
RRI1YDL216C SLD2P34252 453 aa7.19□□□□□ -1.26
RRI1YDL216C GRS1P38088 690 aaKnown RBP7.19□□□□□ -1.26
RRI1YDL216C YBR287WP38355 427 aa7.19□□□□□ -1.26
RRI1YDL216C HXT8P40886 569 aa7.19□□□□□ -1.26
RRI1YDL216C YCK2P23292 546 aaKnown RBP7.18□□□□□ -1.26
RRI1YDL216C STM1P39015 273 aaKnown RBP7.18□□□□□ -1.26
RRI1YDL216C SUT1P53032 299 aaKnown RBP7.18□□□□□ -1.26
RRI1YDL216C CUS1Q02554 436 aaPredicted RBP7.18□□□□□ -1.26
RRI1YDL216C RPB10P22139 70 aa7.17□□□□□ -1.26
RRI1YDL216C NCL1P38205 684 aaKnown RBP7.17□□□□□ -1.26
RRI1YDL216C GIP1P38229 639 aa7.17□□□□□ -1.26
RRI1YDL216C FIR1P40020 876 aa7.17□□□□□ -1.26
RRI1YDL216C MDJ2P42834 146 aa7.17□□□□□ -1.26
RRI1YDL216C NOP8Q08287 484 aaPredicted RBP7.17□□□□□ -1.26
RRI1YDL216C YOR296WQ08748 1289 aa7.17□□□□□ -1.26
RRI1YDL216C SMC1P32908 1225 aa7.16□□□□□ -1.26
RRI1YDL216C ISW1P38144 1129 aa7.16□□□□□ -1.26
RRI1YDL216C PRK1P40494 810 aa7.16□□□□□ -1.26
RRI1YDL216C YNR040WP53736 256 aa7.16□□□□□ -1.26
RRI1YDL216C UFD2P54860 961 aa7.16□□□□□ -1.26
RRI1YDL216C YDR215CQ12240 137 aa7.16□□□□□ -1.26
RRI1YDL216C MSN1P22148 382 aa7.14□□□□□ -1.27
RRI1YDL216C KTR2P33550 425 aa7.14□□□□□ -1.27
RRI1YDL216C APM2P38700 605 aa7.14□□□□□ -1.27
RRI1YDL216C SLN1P39928 1220 aaPredicted RBP7.14□□□□□ -1.27
RRI1YDL216C TRS120Q04183 1289 aa7.13□□□□□ -1.27
RRI1YDL216C SEC20P28791 383 aa7.12□□□□□ -1.27
RRI1YDL216C BSD2P38356 321 aa7.12□□□□□ -1.27
RRI1YDL216C YHL050CP38721 697 aa7.11□□□□□ -1.27
RRI1YDL216C YHR219WP38900 624 aa7.11□□□□□ -1.27
RRI1YDL216C RAD55P38953 406 aa7.11□□□□□ -1.27
RRI1YDL216C NTA1P40354 457 aa7.11□□□□□ -1.27
RRI1YDL216C NAB2P32505 525 aaKnown RBP RIP-Chip data7.1□□□□□ -1.27not detected
RRI1YDL216C PGM2P37012 569 aaKnown RBP7.1□□□□□ -1.27
RRI1YDL216C ALG14P38242 237 aa7.1□□□□□ -1.27
RRI1YDL216C NUT2Q06213 157 aa7.1□□□□□ -1.27
RRI1YDL216C RGD2P43556 714 aa7.09□□□□□ -1.27
RRI1YDL216C PRY1P47032 299 aa7.09□□□□□ -1.27
RRI1YDL216C ITC1P53125 1264 aa7.09□□□□□ -1.27
RRI1YDL216C SEN54Q02825 467 aaPredicted RBP7.09□□□□□ -1.27
RRI1YDL216C MSC6Q08818 692 aaKnown RBP7.09□□□□□ -1.27
RRI1YDL216C NHA1Q99271 985 aa7.09□□□□□ -1.27
RRI1YDL216C IRS4P36115 615 aaKnown RBP7.08□□□□□ -1.28
RRI1YDL216C PPX1P38698 397 aa7.08□□□□□ -1.28
RRI1YDL216C FRT1Q99332 602 aa7.08□□□□□ -1.28
RRI1YDL216C NAR1P23503 491 aaKnown RBP7.07□□□□□ -1.28
RRI1YDL216C TAT1P38085 619 aa7.07□□□□□ -1.28
RRI1YDL216C YER156CP40093 338 aaKnown RBP7.07□□□□□ -1.28
RRI1YDL216C GIS4Q04233 774 aa7.07□□□□□ -1.28
RRI1YDL216C MCA1Q08601 432 aa7.07□□□□□ -1.28
RRI1YDL216C SBP1P10080 294 aaKnown RBP7.06□□□□□ -1.28
RRI1YDL216C AMN1P38285 549 aaPredicted RBP7.06□□□□□ -1.28
RRI1YDL216C AIM46P38885 310 aa7.06□□□□□ -1.28
RRI1YDL216C PSY2P40164 858 aa7.06□□□□□ -1.28
Retrieved 100 of 5,963 RNA–protein pairs in 41 ms