RNA–Protein interactions for RNA: YDL204W

RTN2, Transcript of Reticulon protein, yeast

Gene RTN2, Length 1,182 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RTN2	YDL204W	POM152	P39685	1337 aa		11.66	□□□□□ -0.54
RTN2	YDL204W	PIF1	P07271	859 aa		11.66	□□□□□ -0.54
RTN2	YDL204W	PRX1	P34227	261 aa	Known RBP	11.66	□□□□□ -0.54
RTN2	YDL204W	RSC1	P53236	928 aa		11.66	□□□□□ -0.54
RTN2	YDL204W	CTF18	P49956	741 aa		11.65	□□□□□ -0.54
RTN2	YDL204W	RAT1	Q02792	1006 aa	Known RBP	11.65	□□□□□ -0.54
RTN2	YDL204W	PSK2	Q08217	1101 aa		11.65	□□□□□ -0.54
RTN2	YDL204W	BUG1	Q12191	341 aa		11.65	□□□□□ -0.54
RTN2	YDL204W	MNN4	P36044	1178 aa		11.64	□□□□□ -0.55
RTN2	YDL204W	RKM3	P38222	552 aa		11.64	□□□□□ -0.55
RTN2	YDL204W	ETT1	Q08421	412 aa	Known RBP	11.64	□□□□□ -0.55
RTN2	YDL204W	UBP1	P25037	809 aa		11.63	□□□□□ -0.55
RTN2	YDL204W	YMR147W	P40218	223 aa	Known RBP	11.63	□□□□□ -0.55
RTN2	YDL204W	YKE2	P52553	114 aa		11.63	□□□□□ -0.55
RTN2	YDL204W	ESF1	Q06344	628 aa	Known RBP	11.63	□□□□□ -0.55
RTN2	YDL204W	PEP3	P27801	918 aa		11.62	□□□□□ -0.55
RTN2	YDL204W	YHL017W	P38745	532 aa		11.62	□□□□□ -0.55
RTN2	YDL204W	DIB1	Q06819	143 aa	Predicted RBP	11.62	□□□□□ -0.55
RTN2	YDL204W	PGA3	Q12746	312 aa	Known RBP	11.62	□□□□□ -0.55
RTN2	YDL204W	IMP2'	P32351	346 aa		11.61	□□□□□ -0.55
RTN2	YDL204W	VID28	P40547	921 aa		11.61	□□□□□ -0.55
RTN2	YDL204W	SRC1	Q03707	834 aa		11.61	□□□□□ -0.55
RTN2	YDL204W	ELG1	Q12050	791 aa		11.61	□□□□□ -0.55
RTN2	YDL204W	SSF2	Q12153	453 aa	Predicted RBP	11.61	□□□□□ -0.55
RTN2	YDL204W	APC11	Q12157	165 aa		11.61	□□□□□ -0.55
RTN2	YDL204W	CPA2	P03965	1118 aa	Known RBP	11.6	□□□□□ -0.55
RTN2	YDL204W	NGR1	P32831	672 aa	Known RBP	11.6	□□□□□ -0.55
RTN2	YDL204W	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	11.6	□□□□□ -0.55	not detected
RTN2	YDL204W	CCT5	P40413	562 aa	Known RBP	11.6	□□□□□ -0.55
RTN2	YDL204W	BUD6	P41697	788 aa		11.6	□□□□□ -0.55
RTN2	YDL204W	ENT3	P47160	408 aa		11.6	□□□□□ -0.55
RTN2	YDL204W	DID4	P36108	232 aa		11.59	□□□□□ -0.55
RTN2	YDL204W	MET1	P36150	593 aa		11.59	□□□□□ -0.55
RTN2	YDL204W	NPR2	P39923	615 aa		11.59	□□□□□ -0.55
RTN2	YDL204W	BBC1	P47068	1157 aa		11.59	□□□□□ -0.55
RTN2	YDL204W	FAS2	P19097	1887 aa	Known RBP	11.59	□□□□□ -0.55
RTN2	YDL204W	MATALPHA2	P0CY08	210 aa		11.58	□□□□□ -0.56
RTN2	YDL204W	HMLALPHA2	P0CY09	210 aa		11.58	□□□□□ -0.56
RTN2	YDL204W	FBP26	P32604	452 aa		11.58	□□□□□ -0.56
RTN2	YDL204W	MIC60	P36112	540 aa		11.58	□□□□□ -0.56
RTN2	YDL204W	UTP22	P53254	1237 aa	Predicted RBP	11.58	□□□□□ -0.56
RTN2	YDL204W	KRE33	P53914	1056 aa	Known RBP	11.58	□□□□□ -0.56
RTN2	YDL204W	YMR074C	Q04773	145 aa		11.58	□□□□□ -0.56
RTN2	YDL204W	TAH18	Q12181	623 aa		11.58	□□□□□ -0.56
RTN2	YDL204W	LAM4	P38800	1345 aa		11.58	□□□□□ -0.56
RTN2	YDL204W	ELM1	P32801	640 aa		11.57	□□□□□ -0.56
RTN2	YDL204W	RRP8	P38961	392 aa	Known RBP	11.57	□□□□□ -0.56
RTN2	YDL204W	THI3	Q07471	609 aa		11.57	□□□□□ -0.56
RTN2	YDL204W	DPH6	Q12429	685 aa		11.57	□□□□□ -0.56
RTN2	YDL204W	TAF13	P11747	167 aa		11.56	□□□□□ -0.56
RTN2	YDL204W	BDF1	P35817	686 aa		11.56	□□□□□ -0.56
RTN2	YDL204W	IRC8	P47046	822 aa		11.56	□□□□□ -0.56
RTN2	YDL204W	UBP10	P53874	792 aa	Predicted RBP	11.56	□□□□□ -0.56
RTN2	YDL204W	YPL150W	Q12152	901 aa		11.56	□□□□□ -0.56
RTN2	YDL204W	HAL5	P38970	855 aa	Known RBP	11.55	□□□□□ -0.56
RTN2	YDL204W	NUG1	P40010	520 aa	Known RBP	11.55	□□□□□ -0.56
RTN2	YDL204W	CTI6	Q08923	506 aa		11.55	□□□□□ -0.56
RTN2	YDL204W	GEF1	P37020	779 aa		11.54	□□□□□ -0.56
RTN2	YDL204W	PKH3	Q03306	898 aa	Predicted RBP	11.54	□□□□□ -0.56
RTN2	YDL204W	BDF2	Q07442	638 aa		11.54	□□□□□ -0.56
RTN2	YDL204W	FRS2	P15625	503 aa	Known RBP	11.53	□□□□□ -0.56
RTN2	YDL204W	RDS1	P25611	832 aa		11.53	□□□□□ -0.56
RTN2	YDL204W	MGM1	P32266	881 aa		11.53	□□□□□ -0.56
RTN2	YDL204W	MRPL10	P36520	322 aa		11.53	□□□□□ -0.56
RTN2	YDL204W	CRG1	P38892	291 aa	RIP-Chip data	11.53	□□□□□ -0.56	not detected
RTN2	YDL204W	KAR5	Q04746	504 aa		11.53	□□□□□ -0.56
RTN2	YDL204W	SPN1	Q06505	410 aa	Predicted RBP	11.53	□□□□□ -0.56
RTN2	YDL204W	FIG2	P25653	1609 aa		11.53	□□□□□ -0.56
RTN2	YDL204W	NPL4	P33755	580 aa		11.52	□□□□□ -0.57
RTN2	YDL204W	RFC5	P38251	354 aa		11.52	□□□□□ -0.57
RTN2	YDL204W	GLO3	P38682	493 aa	Known RBP	11.52	□□□□□ -0.57
RTN2	YDL204W	NPR3	P38742	1146 aa		11.52	□□□□□ -0.57
RTN2	YDL204W	HPC2	Q01448	625 aa		11.52	□□□□□ -0.57
RTN2	YDL204W	BUD31	P25337	157 aa	Predicted RBP	11.51	□□□□□ -0.57
RTN2	YDL204W	MAL33	P38157	468 aa		11.51	□□□□□ -0.57
RTN2	YDL204W	IOC3	P43596	787 aa		11.51	□□□□□ -0.57
RTN2	YDL204W	SYF1	Q04048	859 aa	Predicted RBP	11.51	□□□□□ -0.57
RTN2	YDL204W	EST2	Q06163	884 aa		11.51	□□□□□ -0.57
RTN2	YDL204W	CYB2	P00175	591 aa		11.5	□□□□□ -0.57
RTN2	YDL204W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	11.5	□□□□□ -0.57	not detected
RTN2	YDL204W	MBR1	P23493	339 aa		11.5	□□□□□ -0.57
RTN2	YDL204W	EBP2	P36049	427 aa	Known RBP	11.5	□□□□□ -0.57
RTN2	YDL204W	YIR042C	P40586	236 aa		11.5	□□□□□ -0.57
RTN2	YDL204W	INM2	Q05533	292 aa		11.5	□□□□□ -0.57
RTN2	YDL204W	YLR407W	Q06070	228 aa		11.5	□□□□□ -0.57
RTN2	YDL204W	SGD1	Q06132	899 aa		11.5	□□□□□ -0.57
RTN2	YDL204W	ESC2	Q06340	456 aa		11.5	□□□□□ -0.57
RTN2	YDL204W	DDP1	Q99321	188 aa	Known RBP	11.5	□□□□□ -0.57
RTN2	YDL204W	MPH3	P0CE00	602 aa		11.49	□□□□□ -0.57
RTN2	YDL204W	PGI1	P12709	554 aa	Known RBP	11.49	□□□□□ -0.57
RTN2	YDL204W	DIT2	P21595	489 aa		11.49	□□□□□ -0.57
RTN2	YDL204W	MCM2	P29469	868 aa		11.49	□□□□□ -0.57
RTN2	YDL204W	CAB3	P36076	571 aa		11.49	□□□□□ -0.57
RTN2	YDL204W	RPG1	P38249	964 aa	Known RBP	11.49	□□□□□ -0.57
RTN2	YDL204W	ICP55	P40051	511 aa		11.49	□□□□□ -0.57
RTN2	YDL204W	EPL1	P43572	832 aa		11.49	□□□□□ -0.57
RTN2	YDL204W	ALD3	P54114	506 aa		11.49	□□□□□ -0.57
RTN2	YDL204W	ECM23	Q02710	187 aa		11.49	□□□□□ -0.57
RTN2	YDL204W	IRC3	Q06683	689 aa		11.49	□□□□□ -0.57
RTN2	YDL204W	PMD1	P32634	1753 aa		11.49	□□□□□ -0.57

Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms