RNA–Protein interactions for RNA: YDL041W

YDL041W, Transcript of Dubious open reading frame, yeast

Gene YDL041W, Length 354 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDL041W	YDL041W	YBR287W	P38355	427 aa		3.84	□□□□□ -1.79
YDL041W	YDL041W	FIR1	P40020	876 aa		3.84	□□□□□ -1.79
YDL041W	YDL041W	SUT1	P53032	299 aa	Known RBP	3.84	□□□□□ -1.79
YDL041W	YDL041W	YDL176W	Q12027	708 aa		3.84	□□□□□ -1.79
YDL041W	YDL041W	APC11	Q12157	165 aa		3.84	□□□□□ -1.79
YDL041W	YDL041W	CCP1	P00431	361 aa		3.83	□□□□□ -1.8
YDL041W	YDL041W	RPB10	P22139	70 aa		3.83	□□□□□ -1.8
YDL041W	YDL041W	FPS1	P23900	669 aa		3.83	□□□□□ -1.8
YDL041W	YDL041W	SLD2	P34252	453 aa		3.83	□□□□□ -1.8
YDL041W	YDL041W	BOI1	P38041	980 aa	Known RBP	3.83	□□□□□ -1.8
YDL041W	YDL041W	NCL1	P38205	684 aa	Known RBP	3.83	□□□□□ -1.8
YDL041W	YDL041W	ERP5	P38819	212 aa		3.83	□□□□□ -1.8
YDL041W	YDL041W	CEM1	P39525	442 aa		3.83	□□□□□ -1.8
YDL041W	YDL041W	ACF4	P47129	309 aa		3.83	□□□□□ -1.8
YDL041W	YDL041W	KRE33	P53914	1056 aa	Known RBP	3.83	□□□□□ -1.8
YDL041W	YDL041W	CUS1	Q02554	436 aa	Predicted RBP	3.83	□□□□□ -1.8
YDL041W	YDL041W	YML020W	Q03722	664 aa		3.83	□□□□□ -1.8
YDL041W	YDL041W	RPC31	P17890	251 aa		3.82	□□□□□ -1.8
YDL041W	YDL041W	SMC1	P32908	1225 aa		3.82	□□□□□ -1.8
YDL041W	YDL041W	ISW1	P38144	1129 aa		3.82	□□□□□ -1.8
YDL041W	YDL041W	GIP1	P38229	639 aa		3.82	□□□□□ -1.8
YDL041W	YDL041W	STM1	P39015	273 aa	Known RBP	3.82	□□□□□ -1.8
YDL041W	YDL041W	HXT8	P40886	569 aa		3.82	□□□□□ -1.8
YDL041W	YDL041W	SKP1	P52286	194 aa		3.82	□□□□□ -1.8
YDL041W	YDL041W	UFD2	P54860	961 aa		3.82	□□□□□ -1.8
YDL041W	YDL041W	YOR296W	Q08748	1289 aa		3.82	□□□□□ -1.8
YDL041W	YDL041W	YDR461C-A	Q2V2P7	80 aa		3.82	□□□□□ -1.8
YDL041W	YDL041W	TRL1	P09880	827 aa	Known RBP	3.81	□□□□□ -1.8
YDL041W	YDL041W	BSD2	P38356	321 aa		3.81	□□□□□ -1.8
YDL041W	YDL041W	APM2	P38700	605 aa		3.81	□□□□□ -1.8
YDL041W	YDL041W	LYS5	P50113	272 aa		3.81	□□□□□ -1.8
YDL041W	YDL041W	ADE12	P80210	433 aa	Known RBP	3.81	□□□□□ -1.8
YDL041W	YDL041W	MSN1	P22148	382 aa		3.8	□□□□□ -1.8
YDL041W	YDL041W	SEC20	P28791	383 aa		3.8	□□□□□ -1.8
YDL041W	YDL041W	RAD55	P38953	406 aa		3.8	□□□□□ -1.8
YDL041W	YDL041W	MDJ2	P42834	146 aa		3.8	□□□□□ -1.8
YDL041W	YDL041W	YGR035C	P53222	116 aa		3.8	□□□□□ -1.8
YDL041W	YDL041W	SYT1	Q06836	1226 aa		3.8	□□□□□ -1.8
YDL041W	YDL041W	KTR2	P33550	425 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	YHL050C	P38721	697 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	YHR219W	P38900	624 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	NTA1	P40354	457 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	JJJ3	P47138	172 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	YPL062W	Q02781	134 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	HEH2	Q03281	663 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	TRS120	Q04183	1289 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	HPF1	Q05164	967 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	NOP8	Q08287	484 aa	Predicted RBP	3.79	□□□□□ -1.8
YDL041W	YDL041W	DPH6	Q12429	685 aa		3.79	□□□□□ -1.8
YDL041W	YDL041W	NUT2	Q06213	157 aa		3.78	□□□□□ -1.8
YDL041W	YDL041W	IRS4	P36115	615 aa	Known RBP	3.77	□□□□□ -1.81
YDL041W	YDL041W	AIM46	P38885	310 aa		3.77	□□□□□ -1.81
YDL041W	YDL041W	RGD2	P43556	714 aa		3.77	□□□□□ -1.81
YDL041W	YDL041W	ITC1	P53125	1264 aa		3.77	□□□□□ -1.81
YDL041W	YDL041W	RSC2	Q06488	889 aa		3.77	□□□□□ -1.81
YDL041W	YDL041W	FRT1	Q99332	602 aa		3.77	□□□□□ -1.81
YDL041W	YDL041W	SPA2	P23201	1466 aa	Known RBP	3.77	□□□□□ -1.81
YDL041W	YDL041W	MSC7	P38694	644 aa		3.76	□□□□□ -1.81
YDL041W	YDL041W	PPX1	P38698	397 aa		3.76	□□□□□ -1.81
YDL041W	YDL041W	YER156C	P40093	338 aa	Known RBP	3.76	□□□□□ -1.81
YDL041W	YDL041W	PSY2	P40164	858 aa		3.76	□□□□□ -1.81
YDL041W	YDL041W	YIL165C	P40446	119 aa		3.76	□□□□□ -1.81
YDL041W	YDL041W	YNR040W	P53736	256 aa		3.76	□□□□□ -1.81
YDL041W	YDL041W	SEN54	Q02825	467 aa	Predicted RBP	3.76	□□□□□ -1.81
YDL041W	YDL041W	TY1A-DR2	Q03964	440 aa	Known RBP	3.76	□□□□□ -1.81
YDL041W	YDL041W	MSC6	Q08818	692 aa	Known RBP	3.76	□□□□□ -1.81
YDL041W	YDL041W	TIF6	Q12522	245 aa	Known RBP	3.76	□□□□□ -1.81
YDL041W	YDL041W	IDI1	P15496	288 aa		3.75	□□□□□ -1.81
YDL041W	YDL041W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
YDL041W	YDL041W	THI12	P42883	340 aa		3.75	□□□□□ -1.81
YDL041W	YDL041W	THI5	P43534	340 aa		3.75	□□□□□ -1.81
YDL041W	YDL041W	THI11	P47183	340 aa		3.75	□□□□□ -1.81
YDL041W	YDL041W	PPT1	P53043	513 aa		3.75	□□□□□ -1.81
YDL041W	YDL041W	CDC55	Q00362	526 aa		3.75	□□□□□ -1.81
YDL041W	YDL041W	EMG1	Q06287	252 aa	Known RBP	3.75	□□□□□ -1.81
YDL041W	YDL041W	THI13	Q07748	340 aa		3.75	□□□□□ -1.81
YDL041W	YDL041W	GPM1	P00950	247 aa	Known RBP	3.74	□□□□□ -1.81
YDL041W	YDL041W	PDC5	P16467	563 aa	Known RBP	3.74	□□□□□ -1.81
YDL041W	YDL041W	KNS1	P32350	737 aa	Predicted RBP	3.74	□□□□□ -1.81
YDL041W	YDL041W	ECM2	P38241	364 aa	Known RBP	3.74	□□□□□ -1.81
YDL041W	YDL041W	IPL1	P38991	367 aa		3.74	□□□□□ -1.81
YDL041W	YDL041W	PRK1	P40494	810 aa		3.74	□□□□□ -1.81
YDL041W	YDL041W	YNL011C	P53980	444 aa		3.74	□□□□□ -1.81
YDL041W	YDL041W	BSC2	Q05611	235 aa		3.74	□□□□□ -1.81
YDL041W	YDL041W	GCD6	P32501	712 aa	Known RBP	3.73	□□□□□ -1.81
YDL041W	YDL041W	SAM37	P50110	327 aa		3.73	□□□□□ -1.81
YDL041W	YDL041W	RSC4	Q02206	625 aa		3.73	□□□□□ -1.81
YDL041W	YDL041W	FUS1	P11710	512 aa		3.72	□□□□□ -1.81
YDL041W	YDL041W	TRK2	P28584	889 aa		3.72	□□□□□ -1.81
YDL041W	YDL041W	ASF1	P32447	279 aa		3.72	□□□□□ -1.81
YDL041W	YDL041W	YHL008C	P38750	627 aa		3.72	□□□□□ -1.81
YDL041W	YDL041W	CIC1	P38779	376 aa	Known RBP	3.72	□□□□□ -1.81
YDL041W	YDL041W	YJL181W	P46987	611 aa		3.72	□□□□□ -1.81
YDL041W	YDL041W	MNL2	Q12205	849 aa		3.72	□□□□□ -1.81
YDL041W	YDL041W	WHI5	Q12416	295 aa		3.72	□□□□□ -1.81
YDL041W	YDL041W	AI1	P03875	834 aa		3.71	□□□□□ -1.82
YDL041W	YDL041W	HEM3	P28789	327 aa		3.71	□□□□□ -1.82
YDL041W	YDL041W	MET1	P36150	593 aa		3.71	□□□□□ -1.82
YDL041W	YDL041W	NOC3	Q07896	663 aa	Predicted RBP	3.71	□□□□□ -1.82
YDL041W	YDL041W	PYC2	P32327	1180 aa	Known RBP	3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 31.8 ms