RNA–Protein interactions for RNA: YCR092C

MSH3, Transcript of Mismatch repair protein, yeastyeast

Gene MSH3, Length 3,057 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH3YCR092C YLR278CQ05854 1341 aa2.01□□□□□ -2.09
MSH3YCR092C CHZ1P40019 153 aaPredicted RBP2.01□□□□□ -2.09
MSH3YCR092C TEA1P47988 759 aa2.01□□□□□ -2.09
MSH3YCR092C RAT1Q02792 1006 aaKnown RBP2.01□□□□□ -2.09
MSH3YCR092C FMP30Q02883 468 aa2.01□□□□□ -2.09
MSH3YCR092C DAL5P15365 543 aa2□□□□□ -2.09
MSH3YCR092C PDI1P17967 522 aaKnown RBP2□□□□□ -2.09
MSH3YCR092C DIT2P21595 489 aa2□□□□□ -2.09
MSH3YCR092C BSD2P38356 321 aa2□□□□□ -2.09
MSH3YCR092C COX6P00427 148 aa2□□□□□ -2.09
MSH3YCR092C PBS2P08018 668 aa2□□□□□ -2.09
MSH3YCR092C TAF5P38129 798 aa2□□□□□ -2.09
MSH3YCR092C ETP1P38748 585 aaKnown RBP2□□□□□ -2.09
MSH3YCR092C DMA1P38823 416 aa2□□□□□ -2.09
MSH3YCR092C YFL040WP43562 540 aa2□□□□□ -2.09
MSH3YCR092C CAB1Q04430 367 aa2□□□□□ -2.09
MSH3YCR092C SLY41P22215 453 aa1.99□□□□□ -2.09
MSH3YCR092C PRP45P28004 379 aaPredicted RBP1.99□□□□□ -2.09
MSH3YCR092C RTG2P32608 588 aaKnown RBP1.99□□□□□ -2.09
MSH3YCR092C YKL133CP36066 463 aa1.99□□□□□ -2.09
MSH3YCR092C GEF1P37020 779 aa1.99□□□□□ -2.09
MSH3YCR092C DLD3P39976 496 aaKnown RBP1.99□□□□□ -2.09
MSH3YCR092C RRT6P53117 311 aaPredicted RBP1.99□□□□□ -2.09
MSH3YCR092C MVP1P40959 511 aaKnown RBP1.99□□□□□ -2.09
MSH3YCR092C RPN11P43588 306 aaKnown RBP1.99□□□□□ -2.09
MSH3YCR092C PMD1P32634 1753 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-DR4O74302 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-HP0C2I4 478 aaKnown RBP1.99□□□□□ -2.09
MSH3YCR092C TY1A-AP0CX57 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-PR1P0CX58 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-ORP0CX59 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-PR2P0CX60 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-DR5P0CX65 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-ER2P0CX66 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-GR3P0CX67 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-LR1P0CX68 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-MR2P0CX69 440 aa1.99□□□□□ -2.09
MSH3YCR092C SEC2P17065 759 aa1.99□□□□□ -2.09
MSH3YCR092C TBS1P38114 1094 aa1.99□□□□□ -2.09
MSH3YCR092C YER156CP40093 338 aaKnown RBP1.99□□□□□ -2.09
MSH3YCR092C TY1A-JR2P47099 440 aa1.99□□□□□ -2.09
MSH3YCR092C NCS6P53088 359 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-DR1Q03856 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-ML1Q04706 440 aaKnown RBP1.99□□□□□ -2.09
MSH3YCR092C ALR1Q08269 859 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-BRQ12217 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-NL2Q12470 440 aa1.99□□□□□ -2.09
MSH3YCR092C TY1A-GR2Q12485 440 aa1.99□□□□□ -2.09
MSH3YCR092C RSC30P38781 883 aa1.98□□□□□ -2.09
MSH3YCR092C CST6P40535 587 aa1.98□□□□□ -2.09
MSH3YCR092C XKS1P42826 600 aa1.98□□□□□ -2.09
MSH3YCR092C MSB3P48566 633 aaPredicted RBP1.98□□□□□ -2.09
MSH3YCR092C SSP2Q08646 371 aa1.98□□□□□ -2.09
MSH3YCR092C TUS1Q06412 1307 aa1.98□□□□□ -2.09
MSH3YCR092C ARG82P07250 355 aa1.98□□□□□ -2.09
MSH3YCR092C RGR1P19263 1082 aa1.98□□□□□ -2.09
MSH3YCR092C TIM23P32897 222 aa1.98□□□□□ -2.09
MSH3YCR092C LEO1P38439 464 aa1.98□□□□□ -2.09
MSH3YCR092C DUR1,2P32528 1835 aaKnown RBP1.98□□□□□ -2.09
MSH3YCR092C NUP145P49687 1317 aa1.97□□□□□ -2.09
MSH3YCR092C CDC4P07834 779 aa1.97□□□□□ -2.09
MSH3YCR092C HVG1P0CE11 249 aa1.97□□□□□ -2.09
MSH3YCR092C SBP1P10080 294 aaKnown RBP1.97□□□□□ -2.09
MSH3YCR092C ARG8P18544 423 aa1.97□□□□□ -2.09
MSH3YCR092C SPE2P21182 396 aa1.97□□□□□ -2.09
MSH3YCR092C PPH3P32345 308 aa1.97□□□□□ -2.09
MSH3YCR092C ASH1P34233 588 aa1.97□□□□□ -2.09
MSH3YCR092C MOT2P34909 587 aaKnown RBP1.97□□□□□ -2.09
MSH3YCR092C SYH1Q02875 849 aaKnown RBP1.97□□□□□ -2.09
MSH3YCR092C INP54Q08227 384 aaKnown RBP1.97□□□□□ -2.09
MSH3YCR092C KEX2P13134 814 aa1.97□□□□□ -2.09
MSH3YCR092C DAT1P13483 248 aaKnown RBP1.97□□□□□ -2.09
MSH3YCR092C POL3P15436 1097 aa1.97□□□□□ -2.09
MSH3YCR092C MAM1P40065 302 aa1.97□□□□□ -2.09
MSH3YCR092C AIR1P40507 360 aaKnown RBP1.97□□□□□ -2.09
MSH3YCR092C BFA1P47113 574 aa1.97□□□□□ -2.09
MSH3YCR092C YGR035CP53222 116 aa1.97□□□□□ -2.09
MSH3YCR092C TAF8Q03750 510 aa1.97□□□□□ -2.09
MSH3YCR092C CRF1Q04930 467 aa1.97□□□□□ -2.09
MSH3YCR092C ATG20Q07528 640 aa1.97□□□□□ -2.09
MSH3YCR092C TIF6Q12522 245 aaKnown RBP1.97□□□□□ -2.09
MSH3YCR092C LEU3P08638 886 aa1.97□□□□□ -2.09
MSH3YCR092C ENP1P38333 483 aaKnown RBP1.97□□□□□ -2.09
MSH3YCR092C CLA4P48562 842 aa1.97□□□□□ -2.09
MSH3YCR092C DUS1P53759 423 aaKnown RBP1.97□□□□□ -2.09
MSH3YCR092C COBP00163 385 aa1.96□□□□□ -2.1
MSH3YCR092C NUG1P40010 520 aaKnown RBP1.96□□□□□ -2.1
MSH3YCR092C ALA1P40825 983 aaKnown RBP1.96□□□□□ -2.1
MSH3YCR092C PTK2P47116 818 aaKnown RBP1.96□□□□□ -2.1
MSH3YCR092C KIN4Q01919 800 aa1.96□□□□□ -2.1
MSH3YCR092C YPL062WQ02781 134 aa1.96□□□□□ -2.1
MSH3YCR092C SYF1Q04048 859 aaPredicted RBP1.96□□□□□ -2.1
MSH3YCR092C RPP0P05317 312 aaKnown RBP1.95□□□□□ -2.1
MSH3YCR092C SSA4P22202 642 aaKnown RBP1.95□□□□□ -2.1
MSH3YCR092C TIM50Q02776 476 aa1.95□□□□□ -2.1
MSH3YCR092C MTC5Q03897 1148 aa1.95□□□□□ -2.1
MSH3YCR092C PSE1P32337 1089 aaKnown RBP1.95□□□□□ -2.1
MSH3YCR092C BDP1P46678 594 aa1.95□□□□□ -2.1
MSH3YCR092C ECM16Q04217 1267 aaKnown RBP1.95□□□□□ -2.1
MSH3YCR092C ECM30Q06673 1274 aa1.95□□□□□ -2.1
Retrieved 100 of 5,963 RNA–protein pairs in 18.7 ms