RNA–Protein interactions for RNA: YBR148W

YSW1, Transcript of Protein required for normal prospore membrane formation, yeast

Gene YSW1, Length 1,830 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YSW1	YBR148W	CWH41	P53008	833 aa		4.29	□□□□□ -1.72
YSW1	YBR148W	APC11	Q12157	165 aa		4.29	□□□□□ -1.72
YSW1	YBR148W	LSO1	Q3E827	93 aa		4.29	□□□□□ -1.72
YSW1	YBR148W	TRL1	P09880	827 aa	Known RBP	4.28	□□□□□ -1.72
YSW1	YBR148W	RPB10	P22139	70 aa		4.28	□□□□□ -1.72
YSW1	YBR148W	BSD2	P38356	321 aa		4.28	□□□□□ -1.72
YSW1	YBR148W	CEM1	P39525	442 aa		4.28	□□□□□ -1.72
YSW1	YBR148W	MRP10	O75012	95 aa		4.28	□□□□□ -1.72
YSW1	YBR148W	LYS5	P50113	272 aa		4.28	□□□□□ -1.72
YSW1	YBR148W	ITC1	P53125	1264 aa		4.28	□□□□□ -1.72
YSW1	YBR148W	TY1A-DR2	Q03964	440 aa	Known RBP	4.28	□□□□□ -1.72
YSW1	YBR148W	MSN1	P22148	382 aa		4.27	□□□□□ -1.73
YSW1	YBR148W	YTA6	P40328	754 aa		4.27	□□□□□ -1.73
YSW1	YBR148W	MDJ1	P35191	511 aa		4.26	□□□□□ -1.73
YSW1	YBR148W	YFL066C	P43538	392 aa		4.26	□□□□□ -1.73
YSW1	YBR148W	LSB3	P43603	459 aa	Known RBP	4.26	□□□□□ -1.73
YSW1	YBR148W	RPL34A	P87262	121 aa	Predicted RBP	4.26	□□□□□ -1.73
YSW1	YBR148W	FPS1	P23900	669 aa		4.25	□□□□□ -1.73
YSW1	YBR148W	RGD2	P43556	714 aa		4.25	□□□□□ -1.73
YSW1	YBR148W	DPH6	Q12429	685 aa		4.25	□□□□□ -1.73
YSW1	YBR148W	ICP55	P40051	511 aa		4.25	□□□□□ -1.73
YSW1	YBR148W	MDJ2	P42834	146 aa		4.25	□□□□□ -1.73
YSW1	YBR148W	GPM1	P00950	247 aa	Known RBP	4.24	□□□□□ -1.73
YSW1	YBR148W	APM2	P38700	605 aa		4.24	□□□□□ -1.73
YSW1	YBR148W	ERP5	P38819	212 aa		4.24	□□□□□ -1.73
YSW1	YBR148W	PRK1	P40494	810 aa		4.24	□□□□□ -1.73
YSW1	YBR148W	KAR5	Q04746	504 aa		4.24	□□□□□ -1.73
YSW1	YBR148W	YOR296W	Q08748	1289 aa		4.24	□□□□□ -1.73
YSW1	YBR148W	FUR4	P05316	633 aa	Known RBP	4.23	□□□□□ -1.73
YSW1	YBR148W	CDC3	P32457	520 aa	Known RBP	4.23	□□□□□ -1.73
YSW1	YBR148W	LDH1	P38139	375 aa		4.23	□□□□□ -1.73
YSW1	YBR148W	SUT1	P53032	299 aa	Known RBP	4.23	□□□□□ -1.73
YSW1	YBR148W	EMG1	Q06287	252 aa	Known RBP	4.23	□□□□□ -1.73
YSW1	YBR148W	HAT1	Q12341	374 aa		4.23	□□□□□ -1.73
YSW1	YBR148W	IDI1	P15496	288 aa		4.23	□□□□□ -1.73
YSW1	YBR148W	DYS1	P38791	387 aa		4.23	□□□□□ -1.73
YSW1	YBR148W	QDR1	P40475	563 aa		4.23	□□□□□ -1.73
YSW1	YBR148W	HXT8	P40886	569 aa		4.23	□□□□□ -1.73
YSW1	YBR148W	SBE2	P42223	864 aa	Known RBP	4.23	□□□□□ -1.73
YSW1	YBR148W	MNL2	Q12205	849 aa		4.23	□□□□□ -1.73
YSW1	YBR148W	PDC5	P16467	563 aa	Known RBP	4.22	□□□□□ -1.73
YSW1	YBR148W	RRN6	P32786	894 aa		4.22	□□□□□ -1.73
YSW1	YBR148W	GIP1	P38229	639 aa		4.22	□□□□□ -1.73
YSW1	YBR148W	GLO3	P38682	493 aa	Known RBP	4.22	□□□□□ -1.73
YSW1	YBR148W	PUS1	Q12211	544 aa	Known RBP	4.22	□□□□□ -1.73
YSW1	YBR148W	GPI13	Q07830	1017 aa		4.21	□□□□□ -1.74
YSW1	YBR148W	YBL113C	Q7M4S9	792 aa		4.21	□□□□□ -1.74
YSW1	YBR148W	FRT1	Q99332	602 aa		4.21	□□□□□ -1.74
YSW1	YBR148W	YIL165C	P40446	119 aa		4.21	□□□□□ -1.74
YSW1	YBR148W	TIF6	Q12522	245 aa	Known RBP	4.21	□□□□□ -1.74
YSW1	YBR148W	NCL1	P38205	684 aa	Known RBP	4.2	□□□□□ -1.74
YSW1	YBR148W	ATG1	P53104	897 aa		4.2	□□□□□ -1.74
YSW1	YBR148W	CTR9	P89105	1077 aa		4.2	□□□□□ -1.74
YSW1	YBR148W	ISW1	P38144	1129 aa		4.19	□□□□□ -1.74
YSW1	YBR148W	THI72	Q08579	599 aa		4.19	□□□□□ -1.74
YSW1	YBR148W	KNS1	P32350	737 aa	Predicted RBP	4.18	□□□□□ -1.74
YSW1	YBR148W	DUR3	P33413	735 aa		4.18	□□□□□ -1.74
YSW1	YBR148W	YER156C	P40093	338 aa	Known RBP	4.18	□□□□□ -1.74
YSW1	YBR148W	NTA1	P40354	457 aa		4.18	□□□□□ -1.74
YSW1	YBR148W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.18	□□□□□ -1.74	not detected
YSW1	YBR148W	HEH2	Q03281	663 aa		4.18	□□□□□ -1.74
YSW1	YBR148W	COB	P00163	385 aa		4.18	□□□□□ -1.74
YSW1	YBR148W	GRS1	P38088	690 aa	Known RBP	4.18	□□□□□ -1.74
YSW1	YBR148W	ACF4	P47129	309 aa		4.18	□□□□□ -1.74
YSW1	YBR148W	NAR1	P23503	491 aa	Known RBP	4.17	□□□□□ -1.74
YSW1	YBR148W	SSF1	P38789	453 aa	Predicted RBP	4.17	□□□□□ -1.74
YSW1	YBR148W	NUT2	Q06213	157 aa		4.17	□□□□□ -1.74
YSW1	YBR148W	TFA2	P36145	328 aa		4.16	□□□□□ -1.74
YSW1	YBR148W	RAD55	P38953	406 aa		4.16	□□□□□ -1.74
YSW1	YBR148W	PHM7	Q12252	991 aa		4.16	□□□□□ -1.74
YSW1	YBR148W	AI1	P03875	834 aa		4.16	□□□□□ -1.74
YSW1	YBR148W	PSY2	P40164	858 aa		4.16	□□□□□ -1.74
YSW1	YBR148W	TRS120	Q04183	1289 aa		4.16	□□□□□ -1.74
YSW1	YBR148W	TDA6	Q06466	467 aa		4.16	□□□□□ -1.74
YSW1	YBR148W	YCK2	P23292	546 aa	Known RBP	4.15	□□□□□ -1.75
YSW1	YBR148W	PGM2	P37012	569 aa	Known RBP	4.15	□□□□□ -1.75
YSW1	YBR148W	YJL181W	P46987	611 aa		4.15	□□□□□ -1.75
YSW1	YBR148W	PPT1	P53043	513 aa		4.15	□□□□□ -1.75
YSW1	YBR148W	RSC4	Q02206	625 aa		4.15	□□□□□ -1.75
YSW1	YBR148W	IRS4	P36115	615 aa	Known RBP	4.14	□□□□□ -1.75
YSW1	YBR148W	AIM46	P38885	310 aa		4.14	□□□□□ -1.75
YSW1	YBR148W	NSG2	P53898	299 aa		4.14	□□□□□ -1.75
YSW1	YBR148W	ALD3	P54114	506 aa		4.14	□□□□□ -1.75
YSW1	YBR148W	GIS4	Q04233	774 aa		4.14	□□□□□ -1.75
YSW1	YBR148W	YHL050C	P38721	697 aa		4.14	□□□□□ -1.75
YSW1	YBR148W	YHR219W	P38900	624 aa		4.14	□□□□□ -1.75
YSW1	YBR148W	SLN1	P39928	1220 aa	Predicted RBP	4.14	□□□□□ -1.75
YSW1	YBR148W	FIR1	P40020	876 aa		4.14	□□□□□ -1.75
YSW1	YBR148W	INP51	P40559	946 aa	Known RBP	4.14	□□□□□ -1.75
YSW1	YBR148W	SEN54	Q02825	467 aa	Predicted RBP	4.14	□□□□□ -1.75
YSW1	YBR148W	WHI5	Q12416	295 aa		4.14	□□□□□ -1.75
YSW1	YBR148W	PYC2	P32327	1180 aa	Known RBP	4.13	□□□□□ -1.75
YSW1	YBR148W	SMC1	P32908	1225 aa		4.13	□□□□□ -1.75
YSW1	YBR148W	AMN1	P38285	549 aa	Predicted RBP	4.13	□□□□□ -1.75
YSW1	YBR148W	BIO5	P53744	561 aa	Known RBP	4.13	□□□□□ -1.75
YSW1	YBR148W	HVG1	P0CE11	249 aa		4.12	□□□□□ -1.75
YSW1	YBR148W	BOI2	P39969	1040 aa		4.12	□□□□□ -1.75
YSW1	YBR148W	TOS4	Q06266	489 aa		4.12	□□□□□ -1.75
YSW1	YBR148W	GAS5	Q08193	484 aa		4.12	□□□□□ -1.75
YSW1	YBR148W	RPP1A	P05318	106 aa	Predicted RBP	4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 8.8 ms