RNA–Protein interactions for RNA: YBR106W

PHO88, Transcript of Probable membrane protein, yeast

Gene PHO88, Length 567 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PHO88	YBR106W	KRI1	P42846	591 aa	Known RBP	4.83	□□□□□ -1.64
PHO88	YBR106W	DOS2	P54858	310 aa		4.83	□□□□□ -1.64
PHO88	YBR106W	FRK1	Q03002	865 aa	Predicted RBP	4.83	□□□□□ -1.64
PHO88	YBR106W	BSC2	Q05611	235 aa		4.83	□□□□□ -1.64
PHO88	YBR106W	NOC3	Q07896	663 aa	Predicted RBP	4.83	□□□□□ -1.64
PHO88	YBR106W	RPP1A	P05318	106 aa	Predicted RBP	4.82	□□□□□ -1.64
PHO88	YBR106W	ARG82	P07250	355 aa		4.82	□□□□□ -1.64
PHO88	YBR106W	PEP7	P32609	515 aa		4.82	□□□□□ -1.64
PHO88	YBR106W	MSN5	P52918	1224 aa		4.82	□□□□□ -1.64
PHO88	YBR106W	SUT1	P53032	299 aa	Known RBP	4.82	□□□□□ -1.64
PHO88	YBR106W	YGR122W	P53272	402 aa		4.82	□□□□□ -1.64
PHO88	YBR106W	WRS1	Q12109	432 aa	Known RBP	4.82	□□□□□ -1.64
PHO88	YBR106W	INO80	P53115	1489 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	TRK1	P12685	1235 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	VMA3	P25515	160 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	SCT1	P32784	759 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	RAD55	P38953	406 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	NTA1	P40354	457 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	DAK2	P43550	591 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	GPI13	Q07830	1017 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	PIN2	Q12057	282 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	MCD1	Q12158	566 aa		4.81	□□□□□ -1.64
PHO88	YBR106W	UGA3	P26370	528 aa		4.8	□□□□□ -1.64
PHO88	YBR106W	KAP122	P32767	1081 aa		4.8	□□□□□ -1.64
PHO88	YBR106W	IRS4	P36115	615 aa	Known RBP	4.8	□□□□□ -1.64
PHO88	YBR106W	ISW1	P38144	1129 aa		4.8	□□□□□ -1.64
PHO88	YBR106W	ECM2	P38241	364 aa	Known RBP	4.8	□□□□□ -1.64
PHO88	YBR106W	MRPS18	P42847	217 aa		4.8	□□□□□ -1.64
PHO88	YBR106W	YOL098C	Q12496	1037 aa		4.8	□□□□□ -1.64
PHO88	YBR106W	Q0182	Q9ZZW1	134 aa		4.8	□□□□□ -1.64
PHO88	YBR106W	BRN1	P38170	754 aa		4.79	□□□□□ -1.64
PHO88	YBR106W	UTP7	P40055	554 aa	Known RBP	4.79	□□□□□ -1.64
PHO88	YBR106W	YAF9	P53930	226 aa		4.79	□□□□□ -1.64
PHO88	YBR106W	YCS4	Q06156	1176 aa		4.79	□□□□□ -1.64
PHO88	YBR106W	PRE9	P23638	258 aa	Known RBP	4.78	□□□□□ -1.64
PHO88	YBR106W	PET112	P33893	541 aa		4.78	□□□□□ -1.64
PHO88	YBR106W	AHP1	P38013	176 aa	Known RBP	4.78	□□□□□ -1.64
PHO88	YBR106W	CST6	P40535	587 aa		4.78	□□□□□ -1.64
PHO88	YBR106W	MSB3	P48566	633 aa	Predicted RBP	4.78	□□□□□ -1.64
PHO88	YBR106W	HST3	P53687	447 aa		4.78	□□□□□ -1.64
PHO88	YBR106W	CWC24	P53769	259 aa		4.78	□□□□□ -1.64
PHO88	YBR106W	VPS16	Q03308	798 aa		4.78	□□□□□ -1.64
PHO88	YBR106W	RAD2	P07276	1031 aa		4.77	□□□□□ -1.65
PHO88	YBR106W	CYC8	P14922	966 aa		4.77	□□□□□ -1.65
PHO88	YBR106W	RPB10	P22139	70 aa		4.77	□□□□□ -1.65
PHO88	YBR106W	GIP1	P38229	639 aa		4.77	□□□□□ -1.65
PHO88	YBR106W	YHL008C	P38750	627 aa		4.77	□□□□□ -1.65
PHO88	YBR106W	RPS26A	P39938	119 aa	Known RBP	4.77	□□□□□ -1.65
PHO88	YBR106W	RPS26B	P39939	119 aa	Known RBP	4.77	□□□□□ -1.65
PHO88	YBR106W	PSY2	P40164	858 aa		4.77	□□□□□ -1.65
PHO88	YBR106W	MAG2	Q06436	670 aa	Known RBP	4.77	□□□□□ -1.65
PHO88	YBR106W	CDC4	P07834	779 aa		4.76	□□□□□ -1.65
PHO88	YBR106W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
PHO88	YBR106W	MSN1	P22148	382 aa		4.76	□□□□□ -1.65
PHO88	YBR106W	AMS1	P22855	1083 aa		4.76	□□□□□ -1.65
PHO88	YBR106W	SRP40	P32583	406 aa	Predicted RBP	4.76	□□□□□ -1.65
PHO88	YBR106W	RVS167	P39743	482 aa	Known RBP	4.76	□□□□□ -1.65
PHO88	YBR106W	VAC8	P39968	578 aa		4.76	□□□□□ -1.65
PHO88	YBR106W	FYV10	P40492	516 aa		4.76	□□□□□ -1.65
PHO88	YBR106W	VTC4	P47075	721 aa		4.76	□□□□□ -1.65
PHO88	YBR106W	YOR131C	Q12486	218 aa		4.76	□□□□□ -1.65
PHO88	YBR106W	SRF1	Q12516	437 aa		4.76	□□□□□ -1.65
PHO88	YBR106W	HXK1	P04806	485 aa	Known RBP	4.75	□□□□□ -1.65
PHO88	YBR106W	IRE1	P32361	1115 aa		4.75	□□□□□ -1.65
PHO88	YBR106W	DAL1	P32375	460 aa		4.75	□□□□□ -1.65
PHO88	YBR106W	RRP14	P36080	434 aa	Known RBP	4.75	□□□□□ -1.65
PHO88	YBR106W	AIM46	P38885	310 aa		4.75	□□□□□ -1.65
PHO88	YBR106W	SSN3	P39073	555 aa		4.75	□□□□□ -1.65
PHO88	YBR106W	QDR2	P40474	542 aa		4.75	□□□□□ -1.65
PHO88	YBR106W	JJJ2	P46997	583 aa		4.75	□□□□□ -1.65
PHO88	YBR106W	YOR296W	Q08748	1289 aa		4.75	□□□□□ -1.65
PHO88	YBR106W	FLP1	P03870	423 aa		4.74	□□□□□ -1.65
PHO88	YBR106W	TAF13	P11747	167 aa		4.74	□□□□□ -1.65
PHO88	YBR106W	SDH2	P21801	266 aa		4.74	□□□□□ -1.65
PHO88	YBR106W	AFT1	P22149	690 aa		4.74	□□□□□ -1.65
PHO88	YBR106W	MCM2	P29469	868 aa		4.74	□□□□□ -1.65
PHO88	YBR106W	FPR3	P38911	411 aa	Known RBP	4.74	□□□□□ -1.65
PHO88	YBR106W	ALD6	P54115	500 aa	Known RBP	4.74	□□□□□ -1.65
PHO88	YBR106W	SPR28	Q04921	423 aa		4.74	□□□□□ -1.65
PHO88	YBR106W	INP54	Q08227	384 aa	Known RBP	4.74	□□□□□ -1.65
PHO88	YBR106W	TMA46	Q12000	345 aa	Known RBP	4.74	□□□□□ -1.65
PHO88	YBR106W	RAD27	P26793	382 aa		4.73	□□□□□ -1.65
PHO88	YBR106W	MLF3	P32047	452 aa		4.73	□□□□□ -1.65
PHO88	YBR106W	SHU2	P38957	223 aa		4.73	□□□□□ -1.65
PHO88	YBR106W	AAD14	P42884	376 aa		4.73	□□□□□ -1.65
PHO88	YBR106W	DAL4	Q04895	635 aa		4.73	□□□□□ -1.65
PHO88	YBR106W	PRP40	P33203	583 aa	Known RBP	4.72	□□□□□ -1.65
PHO88	YBR106W	RGD2	P43556	714 aa		4.72	□□□□□ -1.65
PHO88	YBR106W	MTO1	P53070	669 aa		4.72	□□□□□ -1.65
PHO88	YBR106W	LSC2	P53312	427 aa		4.72	□□□□□ -1.65
PHO88	YBR106W	ALD3	P54114	506 aa		4.72	□□□□□ -1.65
PHO88	YBR106W	ADI1	Q03677	179 aa		4.72	□□□□□ -1.65
PHO88	YBR106W	YLR346C	Q06139	101 aa		4.72	□□□□□ -1.65
PHO88	YBR106W	RSC2	Q06488	889 aa		4.72	□□□□□ -1.65
PHO88	YBR106W	PMT7	Q06644	662 aa		4.72	□□□□□ -1.65
PHO88	YBR106W	TIF6	Q12522	245 aa	Known RBP	4.72	□□□□□ -1.65
PHO88	YBR106W	RPC31	P17890	251 aa		4.71	□□□□□ -1.66
PHO88	YBR106W	KTR2	P33550	425 aa		4.71	□□□□□ -1.66
PHO88	YBR106W	ASH1	P34233	588 aa		4.71	□□□□□ -1.66
PHO88	YBR106W	SNF7	P39929	240 aa	Known RBP	4.71	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms