RNA–Protein interactions for RNA: YBL103C

RTG3, Transcript of bHLH/Zip transcription factor for retrograde (RTG) and TOR pathways, yeastyeast

Gene RTG3, Length 1,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTG3YBL103C SKP1P52286 194 aa8.07□□□□□ -1.12
RTG3YBL103C RPC31P17890 251 aa8.06□□□□□ -1.12
RTG3YBL103C PNP1Q05788 311 aa8.06□□□□□ -1.12
RTG3YBL103C NSG2P53898 299 aa8.05□□□□□ -1.12
RTG3YBL103C YFL066CP43538 392 aa8.04□□□□□ -1.12
RTG3YBL103C YNR040WP53736 256 aa8.04□□□□□ -1.12
RTG3YBL103C NCL1P38205 684 aaKnown RBP8.03□□□□□ -1.12
RTG3YBL103C ICP55P40051 511 aa8.03□□□□□ -1.12
RTG3YBL103C SBE2P42223 864 aaKnown RBP8.03□□□□□ -1.12
RTG3YBL103C PDC5P16467 563 aaKnown RBP8.02□□□□□ -1.13
RTG3YBL103C NAB2P32505 525 aaKnown RBP RIP-Chip data8.02□□□□□ -1.13not detected
RTG3YBL103C APM2P38700 605 aa8.02□□□□□ -1.13
RTG3YBL103C DYS1P38791 387 aa8.01□□□□□ -1.13
RTG3YBL103C HEH2Q03281 663 aa8.01□□□□□ -1.13
RTG3YBL103C KNS1P32350 737 aaPredicted RBP8□□□□□ -1.13
RTG3YBL103C LDH1P38139 375 aa8□□□□□ -1.13
RTG3YBL103C RPL34AP87262 121 aaPredicted RBP8□□□□□ -1.13
RTG3YBL103C PHM7Q12252 991 aa8□□□□□ -1.13
RTG3YBL103C BSD2P38356 321 aa7.99□□□□□ -1.13
RTG3YBL103C YNR014WP53719 212 aa7.99□□□□□ -1.13
RTG3YBL103C YOR296WQ08748 1289 aa7.99□□□□□ -1.13
RTG3YBL103C RRN6P32786 894 aa7.98□□□□□ -1.13
RTG3YBL103C PRK1P40494 810 aa7.98□□□□□ -1.13
RTG3YBL103C ITC1P53125 1264 aa7.98□□□□□ -1.13
RTG3YBL103C PUS1Q12211 544 aaKnown RBP7.98□□□□□ -1.13
RTG3YBL103C BOI1P38041 980 aaKnown RBP7.97□□□□□ -1.13
RTG3YBL103C TDA6Q06466 467 aa7.97□□□□□ -1.13
RTG3YBL103C SSA1P10591 642 aaKnown RBP7.96□□□□□ -1.13
RTG3YBL103C GIP1P38229 639 aa7.96□□□□□ -1.13
RTG3YBL103C FUR4P05316 633 aaKnown RBP7.95□□□□□ -1.14
RTG3YBL103C MSN1P22148 382 aa7.95□□□□□ -1.14
RTG3YBL103C BOL3P39724 118 aa7.95□□□□□ -1.14
RTG3YBL103C MTC5Q03897 1148 aa7.95□□□□□ -1.14
RTG3YBL103C BOI2P39969 1040 aa7.94□□□□□ -1.14
RTG3YBL103C ISW1P38144 1129 aa7.94□□□□□ -1.14
RTG3YBL103C SUT1P53032 299 aaKnown RBP7.94□□□□□ -1.14
RTG3YBL103C IDI1P15496 288 aa7.93□□□□□ -1.14
RTG3YBL103C HXT8P40886 569 aa7.93□□□□□ -1.14
RTG3YBL103C LSO1Q3E827 93 aa7.93□□□□□ -1.14
RTG3YBL103C RPB10P22139 70 aa7.92□□□□□ -1.14
RTG3YBL103C KTR2P33550 425 aa7.92□□□□□ -1.14
RTG3YBL103C MET1P36150 593 aa7.92□□□□□ -1.14
RTG3YBL103C APC11Q12157 165 aa7.92□□□□□ -1.14
RTG3YBL103C MRP10O75012 95 aa7.91□□□□□ -1.14
RTG3YBL103C YPR053CQ6Q5F3 151 aa7.9□□□□□ -1.14
RTG3YBL103C PGM2P37012 569 aaKnown RBP7.89□□□□□ -1.15
RTG3YBL103C FIR1P40020 876 aa7.89□□□□□ -1.15
RTG3YBL103C YER156CP40093 338 aaKnown RBP7.89□□□□□ -1.15
RTG3YBL103C KAR5Q04746 504 aa7.89□□□□□ -1.15
RTG3YBL103C ALG14P38242 237 aa7.88□□□□□ -1.15
RTG3YBL103C MCX1P38323 520 aaPredicted RBP7.88□□□□□ -1.15
RTG3YBL103C YMR187CQ03236 431 aa7.88□□□□□ -1.15
RTG3YBL103C NAR1P23503 491 aaKnown RBP7.87□□□□□ -1.15
RTG3YBL103C YIL165CP40446 119 aa7.87□□□□□ -1.15
RTG3YBL103C RGD2P43556 714 aa7.87□□□□□ -1.15
RTG3YBL103C EMG1Q06287 252 aaKnown RBP7.87□□□□□ -1.15
RTG3YBL103C GLO3P38682 493 aaKnown RBP7.86□□□□□ -1.15
RTG3YBL103C LSB3P43603 459 aaKnown RBP7.86□□□□□ -1.15
RTG3YBL103C GIS4Q04233 774 aa7.86□□□□□ -1.15
RTG3YBL103C NHA1Q99271 985 aa7.86□□□□□ -1.15
RTG3YBL103C GEF1P37020 779 aa7.85□□□□□ -1.15
RTG3YBL103C YCK2P23292 546 aaKnown RBP7.84□□□□□ -1.15
RTG3YBL103C YJL181WP46987 611 aa7.84□□□□□ -1.15
RTG3YBL103C PPT1P53043 513 aa7.84□□□□□ -1.15
RTG3YBL103C AIM46P38885 310 aa7.83□□□□□ -1.16
RTG3YBL103C SKN7P38889 622 aa7.83□□□□□ -1.16
RTG3YBL103C QDR1P40475 563 aa7.83□□□□□ -1.16
RTG3YBL103C CDC3P32457 520 aaKnown RBP7.82□□□□□ -1.16
RTG3YBL103C YBR287WP38355 427 aa7.82□□□□□ -1.16
RTG3YBL103C RAD55P38953 406 aa7.82□□□□□ -1.16
RTG3YBL103C SLN1P39928 1220 aaPredicted RBP7.82□□□□□ -1.16
RTG3YBL103C NTA1P40354 457 aa7.82□□□□□ -1.16
RTG3YBL103C TAF7Q05021 590 aa7.82□□□□□ -1.16
RTG3YBL103C RSC2Q06488 889 aa7.82□□□□□ -1.16
RTG3YBL103C YDR215CQ12240 137 aa7.82□□□□□ -1.16
RTG3YBL103C TIF6Q12522 245 aaKnown RBP7.81□□□□□ -1.16
RTG3YBL103C SMC1P32908 1225 aa7.81□□□□□ -1.16
RTG3YBL103C CCT8P47079 568 aaKnown RBP7.81□□□□□ -1.16
RTG3YBL103C PRY1P47032 299 aa7.8□□□□□ -1.16
RTG3YBL103C ATG1P53104 897 aa7.79□□□□□ -1.16
RTG3YBL103C PSY2P40164 858 aa7.78□□□□□ -1.16
RTG3YBL103C IRS4P36115 615 aaKnown RBP7.77□□□□□ -1.17
RTG3YBL103C SOK2P53438 785 aaPredicted RBP7.77□□□□□ -1.17
RTG3YBL103C INP51P40559 946 aaKnown RBP7.76□□□□□ -1.17
RTG3YBL103C MCA1Q08601 432 aa7.76□□□□□ -1.17
RTG3YBL103C HAT1Q12341 374 aa7.76□□□□□ -1.17
RTG3YBL103C TRL1P09880 827 aaKnown RBP7.75□□□□□ -1.17
RTG3YBL103C RRM3P38766 723 aa7.75□□□□□ -1.17
RTG3YBL103C TED1P40533 473 aa7.75□□□□□ -1.17
RTG3YBL103C BUD9P53226 547 aa7.75□□□□□ -1.17
RTG3YBL103C TAT1P38085 619 aa7.75□□□□□ -1.17
RTG3YBL103C GIP2P40036 548 aa7.75□□□□□ -1.17
RTG3YBL103C GAS5Q08193 484 aa7.75□□□□□ -1.17
RTG3YBL103C GRS1P38088 690 aaKnown RBP7.74□□□□□ -1.17
RTG3YBL103C ERP5P38819 212 aa7.74□□□□□ -1.17
RTG3YBL103C ACF4P47129 309 aa7.74□□□□□ -1.17
RTG3YBL103C ALD3P54114 506 aa7.74□□□□□ -1.17
RTG3YBL103C SLP1Q12232 587 aa7.74□□□□□ -1.17
RTG3YBL103C YBL113CQ7M4S9 792 aa7.74□□□□□ -1.17
RTG3YBL103C TFA2P36145 328 aa7.73□□□□□ -1.17
Retrieved 100 of 5,963 RNA–protein pairs in 51.6 ms