RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeastyeast

Gene PRE7, Length 726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE7YBL041W TRK2P28584 889 aa7.46□□□□□ -1.22
PRE7YBL041W TYS1P36421 394 aaKnown RBP7.46□□□□□ -1.22
PRE7YBL041W APL6P46682 809 aa7.46□□□□□ -1.22
PRE7YBL041W TFB3Q03290 321 aa7.46□□□□□ -1.22
PRE7YBL041W PKC1P24583 1151 aa7.45□□□□□ -1.22
PRE7YBL041W YDJ1P25491 409 aaKnown RBP7.45□□□□□ -1.22
PRE7YBL041W CSE4P36012 229 aa7.45□□□□□ -1.22
PRE7YBL041W YBL036CP38197 257 aa7.45□□□□□ -1.22
PRE7YBL041W EMP47P43555 445 aa7.45□□□□□ -1.22
PRE7YBL041W NAM8Q00539 523 aaKnown RBP7.45□□□□□ -1.22
PRE7YBL041W BIO2P32451 375 aa7.44□□□□□ -1.22
PRE7YBL041W PDR5P33302 1511 aaKnown RBP7.43□□□□□ -1.22
PRE7YBL041W SPT5P27692 1063 aaKnown RBP7.42□□□□□ -1.22
PRE7YBL041W HAL5P38970 855 aaKnown RBP7.41□□□□□ -1.22
PRE7YBL041W VTC4P47075 721 aa7.41□□□□□ -1.22
PRE7YBL041W ISR1Q06098 443 aaKnown RBP7.41□□□□□ -1.22
PRE7YBL041W BRL1P38770 471 aa7.4□□□□□ -1.22
PRE7YBL041W THI12P42883 340 aa7.4□□□□□ -1.22
PRE7YBL041W THI5P43534 340 aa7.4□□□□□ -1.22
PRE7YBL041W THI11P47183 340 aa7.4□□□□□ -1.22
PRE7YBL041W THI13Q07748 340 aa7.4□□□□□ -1.22
PRE7YBL041W WTM2Q12206 467 aa7.4□□□□□ -1.22
PRE7YBL041W GCN2P15442 1659 aa7.39□□□□□ -1.23
PRE7YBL041W SSM4P40318 1319 aa7.39□□□□□ -1.23
PRE7YBL041W MRX12P47084 519 aa7.38□□□□□ -1.23
PRE7YBL041W DLD3P39976 496 aaKnown RBP7.37□□□□□ -1.23
PRE7YBL041W SPT2P06843 333 aaPredicted RBP7.36□□□□□ -1.23
PRE7YBL041W DAL1P32375 460 aa7.36□□□□□ -1.23
PRE7YBL041W TY1A-DR3Q12441 440 aa7.36□□□□□ -1.23
PRE7YBL041W PDR11P40550 1411 aa7.35□□□□□ -1.23
PRE7YBL041W UTR2P32623 467 aa7.35□□□□□ -1.23
PRE7YBL041W JJJ3P47138 172 aa7.35□□□□□ -1.23
PRE7YBL041W SSN3P39073 555 aa7.34□□□□□ -1.23
PRE7YBL041W DPH6Q12429 685 aa7.34□□□□□ -1.23
PRE7YBL041W ENO2P00925 437 aaKnown RBP7.33□□□□□ -1.24
PRE7YBL041W SLA1P32790 1244 aa7.33□□□□□ -1.24
PRE7YBL041W CUZ1P53899 274 aa7.33□□□□□ -1.24
PRE7YBL041W RPP2BP02400 110 aaKnown RBP7.32□□□□□ -1.24
PRE7YBL041W SUP45P12385 437 aaKnown RBP7.32□□□□□ -1.24
PRE7YBL041W SOH1P38633 127 aa7.32□□□□□ -1.24
PRE7YBL041W LYS5P50113 272 aa7.32□□□□□ -1.24
PRE7YBL041W YNL108CP53929 270 aa7.32□□□□□ -1.24
PRE7YBL041W CFT1Q06632 1357 aaKnown RBP7.32□□□□□ -1.24
PRE7YBL041W DAT1P13483 248 aaKnown RBP7.31□□□□□ -1.24
PRE7YBL041W UTP7P40055 554 aaKnown RBP7.31□□□□□ -1.24
PRE7YBL041W YPR204WQ08995 1032 aa7.31□□□□□ -1.24
PRE7YBL041W MSN5P52918 1224 aa7.3□□□□□ -1.24
PRE7YBL041W KRE5P22023 1365 aa7.29□□□□□ -1.24
PRE7YBL041W SLX8P40072 274 aa7.28□□□□□ -1.24
PRE7YBL041W RIM21P48565 533 aa7.28□□□□□ -1.24
PRE7YBL041W UBP15P50101 1230 aa7.28□□□□□ -1.24
PRE7YBL041W MTC5Q03897 1148 aa7.28□□□□□ -1.24
PRE7YBL041W RAV1P47104 1357 aa7.28□□□□□ -1.24
PRE7YBL041W BCK1Q01389 1478 aa7.28□□□□□ -1.24
PRE7YBL041W RDS2P19541 446 aaKnown RBP7.27□□□□□ -1.25
PRE7YBL041W HDA3Q06623 655 aa7.27□□□□□ -1.25
PRE7YBL041W MDJ1P35191 511 aa7.26□□□□□ -1.25
PRE7YBL041W YPP1P46951 817 aa7.26□□□□□ -1.25
PRE7YBL041W RIA1P53893 1110 aa7.26□□□□□ -1.25
PRE7YBL041W UTP13Q05946 817 aaKnown RBP7.26□□□□□ -1.25
PRE7YBL041W NUP192P47054 1683 aa7.25□□□□□ -1.25
PRE7YBL041W TBS1P38114 1094 aa7.25□□□□□ -1.25
PRE7YBL041W SUM1P46676 1062 aa7.25□□□□□ -1.25
PRE7YBL041W YNR029CP53729 429 aaKnown RBP7.25□□□□□ -1.25
PRE7YBL041W SHM1P37292 490 aaPredicted RBP7.24□□□□□ -1.25
PRE7YBL041W AHP1P38013 176 aaKnown RBP7.24□□□□□ -1.25
PRE7YBL041W PAF1P38351 445 aa7.24□□□□□ -1.25
PRE7YBL041W CEM1P39525 442 aa7.24□□□□□ -1.25
PRE7YBL041W ATG3P40344 310 aa7.23□□□□□ -1.25
PRE7YBL041W JJJ2P46997 583 aa7.23□□□□□ -1.25
PRE7YBL041W YJL007CP47080 104 aa7.23□□□□□ -1.25
PRE7YBL041W DIT1P21623 536 aa7.22□□□□□ -1.25
PRE7YBL041W YMR265CQ03508 461 aaKnown RBP7.22□□□□□ -1.25
PRE7YBL041W SYT1Q06836 1226 aa7.22□□□□□ -1.25
PRE7YBL041W CBC2Q08920 208 aaKnown RBP RIP-Chip data7.22□□□□□ -1.25not detected
PRE7YBL041W RTC1Q08281 1341 aa7.22□□□□□ -1.25
PRE7YBL041W ICP55P40051 511 aa7.2□□□□□ -1.26
PRE7YBL041W YFL066CP43538 392 aa7.2□□□□□ -1.26
PRE7YBL041W ALD4P46367 519 aaKnown RBP7.19□□□□□ -1.26
PRE7YBL041W ATG32P40458 529 aa7.18□□□□□ -1.26
PRE7YBL041W ALA1P40825 983 aaKnown RBP7.18□□□□□ -1.26
PRE7YBL041W NSG2P53898 299 aa7.18□□□□□ -1.26
PRE7YBL041W KRE33P53914 1056 aaKnown RBP7.18□□□□□ -1.26
PRE7YBL041W CAB1Q04430 367 aa7.18□□□□□ -1.26
PRE7YBL041W MRX10Q05648 414 aa7.18□□□□□ -1.26
PRE7YBL041W YPQ2Q06328 317 aa7.18□□□□□ -1.26
PRE7YBL041W PUS1Q12211 544 aaKnown RBP7.18□□□□□ -1.26
PRE7YBL041W PHM7Q12252 991 aa7.18□□□□□ -1.26
PRE7YBL041W RAD9P14737 1309 aa7.18□□□□□ -1.26
PRE7YBL041W ENO1P00924 437 aaKnown RBP7.17□□□□□ -1.26
PRE7YBL041W IRE1P32361 1115 aa7.17□□□□□ -1.26
PRE7YBL041W BIM1P40013 344 aa7.17□□□□□ -1.26
PRE7YBL041W YDR461C-AQ2V2P7 80 aa7.17□□□□□ -1.26
PRE7YBL041W SWI5P08153 709 aa7.16□□□□□ -1.26
PRE7YBL041W AIM9P40053 627 aaKnown RBP7.16□□□□□ -1.26
PRE7YBL041W PSH1Q12161 406 aa7.16□□□□□ -1.26
PRE7YBL041W AI1P03875 834 aa7.15□□□□□ -1.26
PRE7YBL041W ADE12P80210 433 aaKnown RBP7.15□□□□□ -1.26
PRE7YBL041W THI72Q08579 599 aa7.15□□□□□ -1.26
PRE7YBL041W TY3B-IQ7LHG5 1498 aaKnown RBP7.15□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 16 ms