RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 HDGFP51858 240 aaKnown RBP11.43□□□□□ -0.58
PHGDH-225ENST00000641720 FNBP4Q8N3X1 1017 aaPredicted RBP11.43□□□□□ -0.58
PHGDH-225ENST00000641720 C8orf37Q96NL8 207 aa11.43□□□□□ -0.58
PHGDH-225ENST00000641720 NRAPQ86VF7 1730 aa11.43□□□□□ -0.58
PHGDH-225ENST00000641720 C14orf37Q86TY3 774 aa11.42□□□□□ -0.58
PHGDH-225ENST00000641720 USP32Q8NFA0 1604 aa11.42□□□□□ -0.58
PHGDH-225ENST00000641720 ROBO2Q9HCK4 1378 aa11.41□□□□□ -0.58
PHGDH-225ENST00000641720 TNS1Q9HBL0 1735 aaKnown RBP11.4□□□□□ -0.58
PHGDH-225ENST00000641720 CRYBG1Q9Y4K1 1723 aa11.4□□□□□ -0.58
PHGDH-225ENST00000641720 SLIT2O94813 1529 aa11.4□□□□□ -0.58
PHGDH-225ENST00000641720 KIF1AQ12756 1690 aa11.39□□□□□ -0.59
PHGDH-225ENST00000641720 CHGAP10645 457 aaKnown RBP11.38□□□□□ -0.59
PHGDH-225ENST00000641720 ORAI2Q96SN7 254 aa11.37□□□□□ -0.59
PHGDH-225ENST00000641720 RALGAPBQ86X10 1494 aa11.37□□□□□ -0.59
PHGDH-225ENST00000641720 ADAMTS2O95450 1211 aa11.36□□□□□ -0.59
PHGDH-225ENST00000641720 USP21Q9UK80 565 aa11.36□□□□□ -0.59
PHGDH-225ENST00000641720 NUP155O75694 1391 aa11.36□□□□□ -0.59
PHGDH-225ENST00000641720 RGPD1P0DJD0 1748 aa11.35□□□□□ -0.59
PHGDH-225ENST00000641720 TRPM3Q9HCF6 1732 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-225ENST00000641720 NGLY1Q96IV0 654 aa11.35□□□□□ -0.59
PHGDH-225ENST00000641720 TRPC5Q9UL62 973 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-225ENST00000641720 TECPR2O15040 1411 aa11.35□□□□□ -0.59
PHGDH-225ENST00000641720 BLMP54132 1417 aaPredicted RBP11.35□□□□□ -0.59
PHGDH-225ENST00000641720 HFM1A2PYH4 1435 aa11.34□□□□□ -0.59
PHGDH-225ENST00000641720 FAM50AQ14320 339 aaKnown RBP11.33□□□□□ -0.6
PHGDH-225ENST00000641720 ALS2Q96Q42 1657 aa11.33□□□□□ -0.6
PHGDH-225ENST00000641720 THSD7AQ9UPZ6 1657 aa11.33□□□□□ -0.6
PHGDH-225ENST00000641720 ZRANB1Q9UGI0 708 aa11.32□□□□□ -0.6
PHGDH-225ENST00000641720 RREB1Q92766 1687 aa11.32□□□□□ -0.6
PHGDH-225ENST00000641720 RRBP1Q9P2E9 1410 aaKnown RBP11.31□□□□□ -0.6
PHGDH-225ENST00000641720 CCDC125Q86Z20 511 aa11.3□□□□□ -0.6
PHGDH-225ENST00000641720 GJD4Q96KN9 370 aaPredicted RBP11.3□□□□□ -0.6
PHGDH-225ENST00000641720 NAIPQ13075 1403 aa11.29□□□□□ -0.6
PHGDH-225ENST00000641720 NUP188Q5SRE5 1749 aa11.29□□□□□ -0.6
PHGDH-225ENST00000641720 DEFB132Q7Z7B7 95 aa11.28□□□□□ -0.6
PHGDH-225ENST00000641720 NPHP3Q7Z494 1330 aa11.27□□□□□ -0.61
PHGDH-225ENST00000641720 UTRNP46939 3433 aa11.26□□□□□ -0.61
PHGDH-225ENST00000641720 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
PHGDH-225ENST00000641720 COL14A1Q05707 1796 aaKnown RBP11.26□□□□□ -0.61
PHGDH-225ENST00000641720 ADGRB2O60241 1585 aa11.25□□□□□ -0.61
PHGDH-225ENST00000641720 UNC5CLQ8IV45 518 aa11.25□□□□□ -0.61
PHGDH-225ENST00000641720 SPATA31A3Q5VYP0 1347 aa11.25□□□□□ -0.61
PHGDH-225ENST00000641720 PLEKHH1Q9ULM0 1364 aa11.25□□□□□ -0.61
PHGDH-225ENST00000641720 DISP2A7MBM2 1401 aa11.25□□□□□ -0.61
PHGDH-225ENST00000641720 SPATA31E1Q6ZUB1 1445 aa11.25□□□□□ -0.61
PHGDH-225ENST00000641720 ZNF326Q5BKZ1 582 aaKnown RBP11.24□□□□□ -0.61
PHGDH-225ENST00000641720 TNS3Q68CZ2 1445 aa11.24□□□□□ -0.61
PHGDH-225ENST00000641720 NRXN1Q9ULB1 1477 aa11.24□□□□□ -0.61
PHGDH-225ENST00000641720 XPCQ01831 940 aaPredicted RBP11.23□□□□□ -0.61
PHGDH-225ENST00000641720 CCDC144AA2RUR9 1427 aa11.23□□□□□ -0.61
PHGDH-225ENST00000641720 PHRF1Q9P1Y6 1649 aaKnown RBP11.23□□□□□ -0.61
PHGDH-225ENST00000641720 SBF2Q86WG5 1849 aa11.23□□□□□ -0.61
PHGDH-225ENST00000641720 FOXO3O43524 673 aa11.22□□□□□ -0.61
PHGDH-225ENST00000641720 PIK3C2GO75747 1445 aa11.22□□□□□ -0.61
PHGDH-225ENST00000641720 LRPPRCP42704 1394 aaKnown RBP11.22□□□□□ -0.61
PHGDH-225ENST00000641720 ABCC11Q96J66 1382 aa11.21□□□□□ -0.61
PHGDH-225ENST00000641720 HRCP23327 699 aa11.21□□□□□ -0.61
PHGDH-225ENST00000641720 RPGRIP1LQ68CZ1 1315 aa11.2□□□□□ -0.62
PHGDH-225ENST00000641720 ADGRF5Q8IZF2 1346 aa11.2□□□□□ -0.62
PHGDH-225ENST00000641720 VPS72Q15906 364 aa11.2□□□□□ -0.62
PHGDH-225ENST00000641720 ESCO1Q5FWF5 840 aa11.2□□□□□ -0.62
PHGDH-225ENST00000641720 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
PHGDH-225ENST00000641720 SEPT12Q8IYM1 358 aa11.19□□□□□ -0.62
PHGDH-225ENST00000641720 RGPD3A6NKT7 1758 aaPredicted RBP11.18□□□□□ -0.62
PHGDH-225ENST00000641720 RGPD4Q7Z3J3 1758 aa11.18□□□□□ -0.62
PHGDH-225ENST00000641720 CAMTA1Q9Y6Y1 1673 aa11.18□□□□□ -0.62
PHGDH-225ENST00000641720 ITGAEP38570 1179 aa11.18□□□□□ -0.62
PHGDH-225ENST00000641720 FOXD1Q16676 465 aa11.18□□□□□ -0.62
PHGDH-225ENST00000641720 WAPLQ7Z5K2 1190 aa11.18□□□□□ -0.62
PHGDH-225ENST00000641720 CASZ1Q86V15 1759 aa11.18□□□□□ -0.62
PHGDH-225ENST00000641720 YTHDC2Q9H6S0 1430 aaKnown RBP11.18□□□□□ -0.62
PHGDH-225ENST00000641720 SBNO1A3KN83 1393 aa11.17□□□□□ -0.62
PHGDH-225ENST00000641720 WNK3Q9BYP7 1800 aa11.17□□□□□ -0.62
PHGDH-225ENST00000641720 PEAK1Q9H792 1746 aa11.17□□□□□ -0.62
PHGDH-225ENST00000641720 ADGRB1O14514 1584 aa11.16□□□□□ -0.62
PHGDH-225ENST00000641720 DLC1Q96QB1 1528 aa11.16□□□□□ -0.62
PHGDH-225ENST00000641720 ITSN1Q15811 1721 aa11.16□□□□□ -0.62
PHGDH-225ENST00000641720 PSDA5PKW4 1024 aaPredicted RBP11.16□□□□□ -0.62
PHGDH-225ENST00000641720 TOPAZ1Q8N9V7 1692 aa11.16□□□□□ -0.62
PHGDH-225ENST00000641720 LMO7Q8WWI1 1683 aa11.16□□□□□ -0.62
PHGDH-225ENST00000641720 PARP4Q9UKK3 1724 aaKnown RBP11.15□□□□□ -0.62
PHGDH-225ENST00000641720 CABLES1Q8TDN4 633 aa11.15□□□□□ -0.62
PHGDH-225ENST00000641720 ARHGEF28Q8N1W1 1705 aaKnown RBP11.15□□□□□ -0.63
PHGDH-225ENST00000641720 CHD4Q14839 1912 aa11.14□□□□□ -0.63
PHGDH-225ENST00000641720 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
PHGDH-225ENST00000641720 KRT27Q7Z3Y8 459 aa11.14□□□□□ -0.63
PHGDH-225ENST00000641720 KRT28Q7Z3Y7 464 aa11.13□□□□□ -0.63
PHGDH-225ENST00000641720 ANKARQ7Z5J8 1434 aa11.12□□□□□ -0.63
PHGDH-225ENST00000641720 FAM83GA6ND36 823 aa11.12□□□□□ -0.63
PHGDH-225ENST00000641720 NRKQ7Z2Y5 1582 aa11.11□□□□□ -0.63
PHGDH-225ENST00000641720 TMEM132EQ6IEE7 984 aa11.11□□□□□ -0.63
PHGDH-225ENST00000641720 SIRT1Q96EB6 747 aa11.11□□□□□ -0.63
PHGDH-225ENST00000641720 ARHGEF10O15013 1369 aa11.11□□□□□ -0.63
PHGDH-225ENST00000641720 ANKRD30BQ9BXX2 1392 aa11.11□□□□□ -0.63
PHGDH-225ENST00000641720 TULP4Q9NRJ4 1543 aa11.1□□□□□ -0.63
PHGDH-225ENST00000641720 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
PHGDH-225ENST00000641720 SPATA31A5Q5VU36 1347 aa11.09□□□□□ -0.63
PHGDH-225ENST00000641720 SPATA31A7Q8IWB4 1347 aa11.09□□□□□ -0.63
PHGDH-225ENST00000641720 BAG6P46379 1132 aa11.09□□□□□ -0.63
PHGDH-225ENST00000641720 PHF8Q9UPP1 1060 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms