RNA–Protein interactions for RNA: ENST00000641321.1

CASC19-222, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,173 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-222	ENST00000641321	ST8SIA5	O15466	376 aa		11.45	□□□□□ -0.58
CASC19-222	ENST00000641321	BRICD5	Q6PL45	260 aa		11.45	□□□□□ -0.58
CASC19-222	ENST00000641321	TOR4A	Q9NXH8	423 aa		11.45	□□□□□ -0.58
CASC19-222	ENST00000641321	AVP	P01185	164 aa		11.43	□□□□□ -0.58
CASC19-222	ENST00000641321	DCAF1	Q9Y4B6	1507 aa		11.43	□□□□□ -0.58
CASC19-222	ENST00000641321	ERCC6	Q03468	1493 aa		11.41	□□□□□ -0.58
CASC19-222	ENST00000641321	MSS51	Q4VC12	460 aa		11.41	□□□□□ -0.58
CASC19-222	ENST00000641321	GPIHBP1	Q8IV16	184 aa		11.41	□□□□□ -0.58
CASC19-222	ENST00000641321	PLCB2	Q00722	1185 aa		11.4	□□□□□ -0.58
CASC19-222	ENST00000641321	TTC24	A2A3L6	582 aa	Predicted RBP	11.39	□□□□□ -0.59
CASC19-222	ENST00000641321	AXIN1	O15169	862 aa		11.39	□□□□□ -0.59
CASC19-222	ENST00000641321	CTC1	Q2NKJ3	1217 aa		11.39	□□□□□ -0.59
CASC19-222	ENST00000641321		Q3C1V9	767 aa		11.39	□□□□□ -0.59
CASC19-222	ENST00000641321	PRDM9	Q9NQV7	894 aa		11.39	□□□□□ -0.59
CASC19-222	ENST00000641321	LCE2A	Q5TA79	106 aa	Predicted RBP	11.38	□□□□□ -0.59
CASC19-222	ENST00000641321	RNF19B	Q6ZMZ0	732 aa		11.37	□□□□□ -0.59
CASC19-222	ENST00000641321	TULP1	O00294	542 aa	Predicted RBP	11.36	□□□□□ -0.59
CASC19-222	ENST00000641321	SMCP	P49901	116 aa	Predicted RBP	11.36	□□□□□ -0.59
CASC19-222	ENST00000641321	TREML4	Q6UXN2	200 aa		11.36	□□□□□ -0.59
CASC19-222	ENST00000641321	DACH1	Q9UI36	760 aa		11.36	□□□□□ -0.59
CASC19-222	ENST00000641321	CD46	P15529	392 aa		11.33	□□□□□ -0.6
CASC19-222	ENST00000641321	MMP16	P51512	607 aa		11.33	□□□□□ -0.6
CASC19-222	ENST00000641321	C11orf95	C9JLR9	678 aa	Predicted RBP	11.32	□□□□□ -0.6
CASC19-222	ENST00000641321	WNT7A	O00755	349 aa		11.32	□□□□□ -0.6
CASC19-222	ENST00000641321	ZCCHC6	Q5VYS8	1495 aa	Known RBP	11.32	□□□□□ -0.6
CASC19-222	ENST00000641321	GMPR2	Q9P2T1	348 aa	Known RBP	11.3	□□□□□ -0.6
CASC19-222	ENST00000641321	TRIM32	Q13049	653 aa		11.29	□□□□□ -0.6
CASC19-222	ENST00000641321	MAP2K5	Q13163	448 aa		11.29	□□□□□ -0.6
CASC19-222	ENST00000641321	SNIP1	Q8TAD8	396 aa	Known RBP	11.29	□□□□□ -0.6
CASC19-222	ENST00000641321	REPIN1	Q9BWE0	567 aa	Known RBP	11.29	□□□□□ -0.6
CASC19-222	ENST00000641321	KDM4A	O75164	1064 aa		11.27	□□□□□ -0.61
CASC19-222	ENST00000641321	DXO	O77932	396 aa	Known RBP	11.27	□□□□□ -0.61
CASC19-222	ENST00000641321	SMPD1	P17405	629 aa		11.27	□□□□□ -0.61
CASC19-222	ENST00000641321	USP46	P62068	366 aa		11.27	□□□□□ -0.61
CASC19-222	ENST00000641321	USB1	Q9BQ65	265 aa	Known RBP	11.27	□□□□□ -0.61
CASC19-222	ENST00000641321	IRF6	O14896	467 aa		11.25	□□□□□ -0.61
CASC19-222	ENST00000641321	WFS1	O76024	890 aa		11.25	□□□□□ -0.61
CASC19-222	ENST00000641321	CCDC24	Q8N4L8	307 aa		11.25	□□□□□ -0.61
CASC19-222	ENST00000641321	HAP1	P54257	671 aa	Predicted RBP	11.24	□□□□□ -0.61
CASC19-222	ENST00000641321	MRGPRX2	Q96LB1	330 aa		11.24	□□□□□ -0.61
CASC19-222	ENST00000641321	SENP2	Q9HC62	589 aa		11.24	□□□□□ -0.61
CASC19-222	ENST00000641321	MINK1	Q8N4C8	1332 aa	Predicted RBP	11.21	□□□□□ -0.61
CASC19-222	ENST00000641321	KDM2A	Q9Y2K7	1162 aa		11.21	□□□□□ -0.61
CASC19-222	ENST00000641321		J3QL48	77 aa		11.2	□□□□□ -0.62
CASC19-222	ENST00000641321	MDM2	Q00987	491 aa	Predicted RBP	11.2	□□□□□ -0.62
CASC19-222	ENST00000641321	NFX1	Q12986	1120 aa	Known RBP	11.2	□□□□□ -0.62
CASC19-222	ENST00000641321	KRI1	Q8N9T8	703 aa	Known RBP	11.2	□□□□□ -0.62
CASC19-222	ENST00000641321	ATP13A2	Q9NQ11	1180 aa		11.2	□□□□□ -0.62
CASC19-222	ENST00000641321	HOXA2	O43364	376 aa		11.19	□□□□□ -0.62
CASC19-222	ENST00000641321	HLA-C	Q95604	372 aa		11.19	□□□□□ -0.62
CASC19-222	ENST00000641321	THOC2	Q8NI27	1593 aa	Known RBP	11.19	□□□□□ -0.62
CASC19-222	ENST00000641321	WNT7B	P56706	349 aa		11.18	□□□□□ -0.62
CASC19-222	ENST00000641321	KIFC2	Q96AC6	838 aa		11.18	□□□□□ -0.62
CASC19-222	ENST00000641321	SKOR1	P84550	965 aa		11.17	□□□□□ -0.62
CASC19-222	ENST00000641321	INSM1	Q01101	510 aa	Predicted RBP	11.17	□□□□□ -0.62
CASC19-222	ENST00000641321	RC3H1	Q5TC82	1133 aa	Known RBP	11.16	□□□□□ -0.62
CASC19-222	ENST00000641321	WIPF1	O43516	503 aa		11.15	□□□□□ -0.62
CASC19-222	ENST00000641321	CLCN1	P35523	988 aa		11.15	□□□□□ -0.62
CASC19-222	ENST00000641321	NUTM1	Q86Y26	1132 aa		11.15	□□□□□ -0.62
CASC19-222	ENST00000641321	HPS1	Q92902	700 aa		11.15	□□□□□ -0.62
CASC19-222	ENST00000641321	TRIM47	Q96LD4	638 aa		11.15	□□□□□ -0.62
CASC19-222	ENST00000641321	SNRPB	P14678	240 aa	Known RBP	11.14	□□□□□ -0.63
CASC19-222	ENST00000641321	JUND	P17535	347 aa		11.14	□□□□□ -0.63
CASC19-222	ENST00000641321	GPCPD1	Q9NPB8	672 aa		11.14	□□□□□ -0.63
CASC19-222	ENST00000641321	CCDC102A	Q96A19	550 aa		11.13	□□□□□ -0.63
CASC19-222	ENST00000641321	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.13	□□□□□ -0.63
CASC19-222	ENST00000641321	STK17A	Q9UEE5	414 aa		11.13	□□□□□ -0.63
CASC19-222	ENST00000641321	NCAPD3	P42695	1498 aa		11.12	□□□□□ -0.63
CASC19-222	ENST00000641321	GUCA2A	Q02747	115 aa		11.12	□□□□□ -0.63
CASC19-222	ENST00000641321	ALDH1A1	P00352	501 aa		11.11	□□□□□ -0.63
CASC19-222	ENST00000641321	RETREG3	Q86VR2	466 aa		11.1	□□□□□ -0.63
CASC19-222	ENST00000641321	EHBP1	Q8NDI1	1231 aa		11.1	□□□□□ -0.63
CASC19-222	ENST00000641321	SYMPK	Q92797	1274 aa	Known RBP	11.1	□□□□□ -0.63
CASC19-222	ENST00000641321	NUDT12	Q9BQG2	462 aa		11.1	□□□□□ -0.63
CASC19-222	ENST00000641321	TERT	O14746	1132 aa	Known RBP	11.09	□□□□□ -0.63
CASC19-222	ENST00000641321	WASF2	Q9Y6W5	498 aa		11.09	□□□□□ -0.63
CASC19-222	ENST00000641321	SIAH2	O43255	324 aa		11.08	□□□□□ -0.64
CASC19-222	ENST00000641321	LCE2C	Q5TA81	110 aa		11.08	□□□□□ -0.64
CASC19-222	ENST00000641321	SLC16A10	Q8TF71	515 aa		11.08	□□□□□ -0.64
CASC19-222	ENST00000641321	HMGXB3	Q12766	1538 aa		11.08	□□□□□ -0.64
CASC19-222	ENST00000641321	KIF21A	Q7Z4S6	1674 aa		11.08	□□□□□ -0.64
CASC19-222	ENST00000641321	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.07	□□□□□ -0.64
CASC19-222	ENST00000641321	LAMC3	Q9Y6N6	1575 aa		11.07	□□□□□ -0.64
CASC19-222	ENST00000641321	NES	P48681	1621 aa		11.06	□□□□□ -0.64
CASC19-222	ENST00000641321	C6orf229	H3BNL8	230 aa		11.06	□□□□□ -0.64
CASC19-222	ENST00000641321	SMARCA2	P51531	1590 aa		11.04	□□□□□ -0.64
CASC19-222	ENST00000641321	BAZ1A	Q9NRL2	1556 aa	Predicted RBP	11.04	□□□□□ -0.64
CASC19-222	ENST00000641321	FDX1	P10109	184 aa		11.04	□□□□□ -0.64
CASC19-222	ENST00000641321	MS4A1	P11836	297 aa		11.04	□□□□□ -0.64
CASC19-222	ENST00000641321	PCDHGC3	Q9UN70	934 aa		11.04	□□□□□ -0.64
CASC19-222	ENST00000641321	CCNYL3	P0C7X3	344 aa		11.03	□□□□□ -0.64
CASC19-222	ENST00000641321	FAM181B	A6NEQ2	426 aa		11.02	□□□□□ -0.65
CASC19-222	ENST00000641321	VSIG10	Q8N0Z9	540 aa		11.02	□□□□□ -0.65
CASC19-222	ENST00000641321	CAPN5	O15484	640 aa	Predicted RBP	11.01	□□□□□ -0.65
CASC19-222	ENST00000641321	SH3BP2	P78314	561 aa		11	□□□□□ -0.65
CASC19-222	ENST00000641321	EVA1B	Q9NVM1	165 aa		10.99	□□□□□ -0.65
CASC19-222	ENST00000641321	ATAD2B	Q9ULI0	1458 aa		10.99	□□□□□ -0.65
CASC19-222	ENST00000641321	PLEKHG3	A1L390	1219 aa		10.98	□□□□□ -0.65
CASC19-222	ENST00000641321	SSTR3	P32745	418 aa	Predicted RBP	10.98	□□□□□ -0.65
CASC19-222	ENST00000641321	PTPRN	Q16849	979 aa		10.98	□□□□□ -0.65

Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms