RNA–Protein interactions for RNA: ENST00000640807.1

KCNMA1-289, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,387 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-289ENST00000640807 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.23
KCNMA1-289ENST00000640807 XRN1Q8IZH2 1706 aaKnown RBP16.51■□□□□ 0.23
KCNMA1-289ENST00000640807 KNDC1Q76NI1 1749 aa16.51■□□□□ 0.23
KCNMA1-289ENST00000640807 SBNO2Q9Y2G9 1366 aa16.5■□□□□ 0.23
KCNMA1-289ENST00000640807 SRPK2P78362 688 aaKnown RBP16.5■□□□□ 0.23
KCNMA1-289ENST00000640807 TMEM94Q12767 1356 aa16.5■□□□□ 0.23
KCNMA1-289ENST00000640807 NWD1Q149M9 1564 aa16.49■□□□□ 0.23
KCNMA1-289ENST00000640807 CDK19Q9BWU1 502 aa16.47■□□□□ 0.23
KCNMA1-289ENST00000640807 QRICH2Q9H0J4 1663 aa16.47■□□□□ 0.23
KCNMA1-289ENST00000640807 WASLO00401 505 aaPredicted RBP16.47■□□□□ 0.23
KCNMA1-289ENST00000640807 C19orf44Q9H6X5 657 aa16.47■□□□□ 0.23
KCNMA1-289ENST00000640807 ATF3P18847 181 aa16.46■□□□□ 0.23
KCNMA1-289ENST00000640807 CABP2Q9NPB3 220 aa16.46■□□□□ 0.22
KCNMA1-289ENST00000640807 DISP3Q9P2K9 1392 aa16.45■□□□□ 0.22
KCNMA1-289ENST00000640807 NUTM2FA1L443 756 aa16.45■□□□□ 0.22
KCNMA1-289ENST00000640807 C11orf95C9JLR9 678 aaPredicted RBP16.45■□□□□ 0.22
KCNMA1-289ENST00000640807 MSH6P52701 1360 aa16.44■□□□□ 0.22
KCNMA1-289ENST00000640807 ADGRL3Q9HAR2 1447 aa16.44■□□□□ 0.22
KCNMA1-289ENST00000640807 KIF7Q2M1P5 1343 aa16.44■□□□□ 0.22
KCNMA1-289ENST00000640807 NCOA3Q9Y6Q9 1424 aa16.44■□□□□ 0.22
KCNMA1-289ENST00000640807 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
KCNMA1-289ENST00000640807 TMC1Q8TDI8 760 aa16.43■□□□□ 0.22
KCNMA1-289ENST00000640807 LRRC7Q96NW7 1537 aa16.43■□□□□ 0.22
KCNMA1-289ENST00000640807 WASHC2AQ641Q2 1341 aa16.42■□□□□ 0.22
KCNMA1-289ENST00000640807 CCDC7Q96M83 1385 aa16.42■□□□□ 0.22
KCNMA1-289ENST00000640807 CADPS2Q86UW7 1296 aa16.42■□□□□ 0.22
KCNMA1-289ENST00000640807 PUS7Q96PZ0 661 aaKnown RBP16.41■□□□□ 0.22
KCNMA1-289ENST00000640807 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.41■□□□□ 0.22
KCNMA1-289ENST00000640807 NUDT16Q96DE0 195 aaKnown RBP16.4■□□□□ 0.22
KCNMA1-289ENST00000640807 ATAD2Q6PL18 1390 aa16.4■□□□□ 0.22
KCNMA1-289ENST00000640807 CCDC61Q9Y6R9 512 aa16.39■□□□□ 0.21
KCNMA1-289ENST00000640807 TULP4Q9NRJ4 1543 aa16.39■□□□□ 0.21
KCNMA1-289ENST00000640807 DDX10Q13206 875 aaKnown RBP16.38■□□□□ 0.21
KCNMA1-289ENST00000640807 LTBP4Q8N2S1 1624 aa16.37■□□□□ 0.21
KCNMA1-289ENST00000640807 ADGRB2O60241 1585 aa16.36■□□□□ 0.21
KCNMA1-289ENST00000640807 CABP1Q9NZU7 370 aa16.36■□□□□ 0.21
KCNMA1-289ENST00000640807 NALCNQ8IZF0 1738 aa16.36■□□□□ 0.21
KCNMA1-289ENST00000640807 ESCO1Q5FWF5 840 aa16.35■□□□□ 0.21
KCNMA1-289ENST00000640807 SLC12A5Q9H2X9 1139 aa16.35■□□□□ 0.21
KCNMA1-289ENST00000640807 DCCP43146 1447 aa16.35■□□□□ 0.21
KCNMA1-289ENST00000640807 CDC42BPGQ6DT37 1551 aa16.35■□□□□ 0.21
KCNMA1-289ENST00000640807 PRR36Q9H6K5 1346 aa16.34■□□□□ 0.21
KCNMA1-289ENST00000640807 TERF2IPQ9NYB0 399 aa16.34■□□□□ 0.21
KCNMA1-289ENST00000640807 NGDNQ8NEJ9 315 aaKnown RBP16.33■□□□□ 0.2
KCNMA1-289ENST00000640807 SLAIN2Q9P270 581 aa16.33■□□□□ 0.2
KCNMA1-289ENST00000640807 ANKARQ7Z5J8 1434 aa16.33■□□□□ 0.2
KCNMA1-289ENST00000640807 HDGFL2Q7Z4V5 671 aaPredicted RBP16.33■□□□□ 0.2
KCNMA1-289ENST00000640807 NINLQ9Y2I6 1382 aa16.32■□□□□ 0.2
KCNMA1-289ENST00000640807 PMFBP1Q8TBY8 1022 aa16.32■□□□□ 0.2
KCNMA1-289ENST00000640807 CERKQ8TCT0 537 aa16.32■□□□□ 0.2
KCNMA1-289ENST00000640807 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
KCNMA1-289ENST00000640807 PHF8Q9UPP1 1060 aa16.32■□□□□ 0.2
KCNMA1-289ENST00000640807 TOM1O60784 492 aa16.31■□□□□ 0.2
KCNMA1-289ENST00000640807 PANK3Q9H999 370 aa16.31■□□□□ 0.2
KCNMA1-289ENST00000640807 ATP7BP35670 1465 aa16.3■□□□□ 0.2
KCNMA1-289ENST00000640807 ORAI2Q96SN7 254 aa16.3■□□□□ 0.2
KCNMA1-289ENST00000640807 XIRP1Q702N8 1843 aaKnown RBP16.3■□□□□ 0.2
KCNMA1-289ENST00000640807 PLEKHG3A1L390 1219 aa16.29■□□□□ 0.2
KCNMA1-289ENST00000640807 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
KCNMA1-289ENST00000640807 FMN2Q9NZ56 1722 aa16.29■□□□□ 0.2
KCNMA1-289ENST00000640807 UBAP1LF5GYI3 381 aa16.29■□□□□ 0.2
KCNMA1-289ENST00000640807 MST1RQ04912 1400 aa16.29■□□□□ 0.2
KCNMA1-289ENST00000640807 ZNF692Q9BU19 519 aaPredicted RBP16.28■□□□□ 0.2
KCNMA1-289ENST00000640807 ACEP12821 1306 aa16.28■□□□□ 0.2
KCNMA1-289ENST00000640807 SCAF1Q9H7N4 1312 aaKnown RBP16.28■□□□□ 0.2
KCNMA1-289ENST00000640807 KNSTRNQ9Y448 316 aa16.27■□□□□ 0.2
KCNMA1-289ENST00000640807 PSME1Q06323 249 aa16.27■□□□□ 0.2
KCNMA1-289ENST00000640807 FOXO3O43524 673 aa16.27■□□□□ 0.19
KCNMA1-289ENST00000640807 ANKRD36BQ8N2N9 1353 aa16.26■□□□□ 0.19
KCNMA1-289ENST00000640807 PIP4K2BP78356 416 aa16.25■□□□□ 0.19
KCNMA1-289ENST00000640807 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
KCNMA1-289ENST00000640807 CNGB1Q14028 1251 aaPredicted RBP16.24■□□□□ 0.19
KCNMA1-289ENST00000640807 BRINP3Q76B58 766 aa16.24■□□□□ 0.19
KCNMA1-289ENST00000640807 RGPD8O14715 1765 aaPredicted RBP16.24■□□□□ 0.19
KCNMA1-289ENST00000640807 A0A1W2PP64 1363 aa16.24■□□□□ 0.19
KCNMA1-289ENST00000640807 ITSN1Q15811 1721 aa16.23■□□□□ 0.19
KCNMA1-289ENST00000640807 USP32Q8NFA0 1604 aa16.23■□□□□ 0.19
KCNMA1-289ENST00000640807 IQSEC2Q5JU85 1478 aa16.23■□□□□ 0.19
KCNMA1-289ENST00000640807 DIEXFQ68CQ4 756 aaKnown RBP16.23■□□□□ 0.19
KCNMA1-289ENST00000640807 PAK3O75914 559 aaPredicted RBP16.23■□□□□ 0.19
KCNMA1-289ENST00000640807 NPHP3Q7Z494 1330 aa16.22■□□□□ 0.19
KCNMA1-289ENST00000640807 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.22■□□□□ 0.19
KCNMA1-289ENST00000640807 XPCQ01831 940 aaPredicted RBP16.21■□□□□ 0.19
KCNMA1-289ENST00000640807 CARD14Q9BXL6 1004 aa16.21■□□□□ 0.19
KCNMA1-289ENST00000640807 POLR3AO14802 1390 aaPredicted RBP16.21■□□□□ 0.19
KCNMA1-289ENST00000640807 KRT28Q7Z3Y7 464 aa16.21■□□□□ 0.18
KCNMA1-289ENST00000640807 NSD3Q9BZ95 1437 aa16.2■□□□□ 0.18
KCNMA1-289ENST00000640807 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
KCNMA1-289ENST00000640807 MYOM1P52179 1685 aa16.2■□□□□ 0.18
KCNMA1-289ENST00000640807 CPSF1Q10570 1443 aaKnown RBP16.2■□□□□ 0.18
KCNMA1-289ENST00000640807 LMOD2Q6P5Q4 547 aa16.2■□□□□ 0.18
KCNMA1-289ENST00000640807 DDX17Q92841 729 aaKnown RBP16.19■□□□□ 0.18
KCNMA1-289ENST00000640807 TOPAZ1Q8N9V7 1692 aa16.19■□□□□ 0.18
KCNMA1-289ENST00000640807 PER1O15534 1290 aaPredicted RBP16.18■□□□□ 0.18
KCNMA1-289ENST00000640807 CD163L1Q9NR16 1453 aa16.18■□□□□ 0.18
KCNMA1-289ENST00000640807 USP6P35125 1406 aa16.18■□□□□ 0.18
KCNMA1-289ENST00000640807 EDC4Q6P2E9 1401 aaKnown RBP16.17■□□□□ 0.18
KCNMA1-289ENST00000640807 TTC21BQ7Z4L5 1316 aa16.17■□□□□ 0.18
KCNMA1-289ENST00000640807 CC2D1BQ5T0F9 858 aaKnown RBP16.17■□□□□ 0.18
KCNMA1-289ENST00000640807 KIF1AQ12756 1690 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms