RNA–Protein interactions for RNA: ENST00000640728.1

SPIN3-244, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 1,954 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-244ENST00000640728 CARD14Q9BXL6 1004 aa28.97■■■□□ 2.23
SPIN3-244ENST00000640728 SLC12A5Q9H2X9 1139 aa28.97■■■□□ 2.23
SPIN3-244ENST00000640728 SIRT1Q96EB6 747 aa28.96■■■□□ 2.23
SPIN3-244ENST00000640728 NLRP13Q86W25 1043 aa28.95■■■□□ 2.23
SPIN3-244ENST00000640728 TMC1Q8TDI8 760 aa28.95■■■□□ 2.23
SPIN3-244ENST00000640728 CABP2Q9NPB3 220 aa28.95■■■□□ 2.23
SPIN3-244ENST00000640728 WAPLQ7Z5K2 1190 aa28.95■■■□□ 2.22
SPIN3-244ENST00000640728 MED14O60244 1454 aa28.93■■■□□ 2.22
SPIN3-244ENST00000640728 TECPR2O15040 1411 aa28.93■■■□□ 2.22
SPIN3-244ENST00000640728 PLEKHH1Q9ULM0 1364 aa28.93■■■□□ 2.22
SPIN3-244ENST00000640728 CEP170BQ9Y4F5 1589 aaPredicted RBP28.92■■■□□ 2.22
SPIN3-244ENST00000640728 PNISRQ8TF01 805 aaKnown RBP28.92■■■□□ 2.22
SPIN3-244ENST00000640728 SRPK2P78362 688 aaKnown RBP28.9■■■□□ 2.22
SPIN3-244ENST00000640728 FAM135BQ49AJ0 1406 aa28.9■■■□□ 2.22
SPIN3-244ENST00000640728 HNRNPUQ00839 825 aaKnown RBP eCLIP28.89■■■□□ 2.22
SPIN3-244ENST00000640728 CDK19Q9BWU1 502 aa28.88■■■□□ 2.21
SPIN3-244ENST00000640728 TBX22Q9Y458 520 aa28.88■■■□□ 2.21
SPIN3-244ENST00000640728 ATAD2Q6PL18 1390 aa28.87■■■□□ 2.21
SPIN3-244ENST00000640728 NINLQ9Y2I6 1382 aa28.87■■■□□ 2.21
SPIN3-244ENST00000640728 SLC26A8Q96RN1 970 aa28.87■■■□□ 2.21
SPIN3-244ENST00000640728 KNDC1Q76NI1 1749 aa28.85■■■□□ 2.21
SPIN3-244ENST00000640728 ANKRD36BQ8N2N9 1353 aa28.84■■■□□ 2.21
SPIN3-244ENST00000640728 CPS1P31327 1500 aa28.84■■■□□ 2.21
SPIN3-244ENST00000640728 NSD3Q9BZ95 1437 aa28.83■■■□□ 2.21
SPIN3-244ENST00000640728 SCAF1Q9H7N4 1312 aaKnown RBP28.82■■■□□ 2.2
SPIN3-244ENST00000640728 PPP2R1AP30153 589 aa28.81■■■□□ 2.2
SPIN3-244ENST00000640728 ROBO2Q9HCK4 1378 aa28.81■■■□□ 2.2
SPIN3-244ENST00000640728 SETD1BQ9UPS6 1966 aaKnown RBP28.8■■■□□ 2.2
SPIN3-244ENST00000640728 PTPRUQ92729 1446 aa28.8■■■□□ 2.2
SPIN3-244ENST00000640728 ZNF142P52746 1687 aaPredicted RBP28.79■■■□□ 2.2
SPIN3-244ENST00000640728 WASLO00401 505 aaPredicted RBP28.78■■■□□ 2.2
SPIN3-244ENST00000640728 ANKLE2Q86XL3 938 aa28.77■■■□□ 2.2
SPIN3-244ENST00000640728 GTF3C3Q9Y5Q9 886 aa28.77■■■□□ 2.2
SPIN3-244ENST00000640728 DIP2AQ14689 1571 aa28.76■■■□□ 2.2
SPIN3-244ENST00000640728 AMOTL2Q9Y2J4 779 aa28.75■■■□□ 2.19
SPIN3-244ENST00000640728 TERF2IPQ9NYB0 399 aa28.74■■■□□ 2.19
SPIN3-244ENST00000640728 A0A1W2PP64 1363 aa28.74■■■□□ 2.19
SPIN3-244ENST00000640728 CGNL1Q0VF96 1302 aa28.74■■■□□ 2.19
SPIN3-244ENST00000640728 CABP1Q9NZU7 370 aa28.72■■■□□ 2.19
SPIN3-244ENST00000640728 USP32Q8NFA0 1604 aa28.72■■■□□ 2.19
SPIN3-244ENST00000640728 CD163L1Q9NR16 1453 aa28.72■■■□□ 2.19
SPIN3-244ENST00000640728 ZBED9Q6R2W3 1325 aa28.71■■■□□ 2.19
SPIN3-244ENST00000640728 PIK3R4Q99570 1358 aa28.69■■■□□ 2.18
SPIN3-244ENST00000640728 PTCH1Q13635 1447 aa28.68■■■□□ 2.18
SPIN3-244ENST00000640728 HDGFL2Q7Z4V5 671 aaPredicted RBP28.68■■■□□ 2.18
SPIN3-244ENST00000640728 MORC1Q86VD1 984 aa28.68■■■□□ 2.18
SPIN3-244ENST00000640728 NSD2O96028 1365 aa28.67■■■□□ 2.18
SPIN3-244ENST00000640728 NUDT16Q96DE0 195 aaKnown RBP28.65■■■□□ 2.18
SPIN3-244ENST00000640728 INSRP06213 1382 aa28.64■■■□□ 2.18
SPIN3-244ENST00000640728 ADGRB2O60241 1585 aa28.63■■■□□ 2.17
SPIN3-244ENST00000640728 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.63■■■□□ 2.17
SPIN3-244ENST00000640728 ATP7BP35670 1465 aa28.63■■■□□ 2.17
SPIN3-244ENST00000640728 CCDC61Q9Y6R9 512 aa28.62■■■□□ 2.17
SPIN3-244ENST00000640728 PPIP5K1Q6PFW1 1433 aa28.6■■■□□ 2.17
SPIN3-244ENST00000640728 XRN1Q8IZH2 1706 aaKnown RBP28.6■■■□□ 2.17
SPIN3-244ENST00000640728 KCNA6P17658 529 aa28.59■■■□□ 2.17
SPIN3-244ENST00000640728 PRR36Q9H6K5 1346 aa28.59■■■□□ 2.17
SPIN3-244ENST00000640728 CPSF1Q10570 1443 aaKnown RBP28.58■■■□□ 2.17
SPIN3-244ENST00000640728 FYB1O15117 783 aa28.58■■■□□ 2.17
SPIN3-244ENST00000640728 NPHP4O75161 1426 aaPredicted RBP28.56■■■□□ 2.16
SPIN3-244ENST00000640728 NCKAP5LQ9HCH0 1330 aa28.56■■■□□ 2.16
SPIN3-244ENST00000640728 ADAMTS8Q9UP79 889 aa28.55■■■□□ 2.16
SPIN3-244ENST00000640728 TNNT2P45379 298 aaPredicted RBP28.55■■■□□ 2.16
SPIN3-244ENST00000640728 POLR3AO14802 1390 aaPredicted RBP28.54■■■□□ 2.16
SPIN3-244ENST00000640728 GGNBP2Q9H3C7 697 aa28.54■■■□□ 2.16
SPIN3-244ENST00000640728 BLMP54132 1417 aaPredicted RBP28.54■■■□□ 2.16
SPIN3-244ENST00000640728 WDR43Q15061 677 aaKnown RBP eCLIP28.53■■■□□ 2.16
SPIN3-244ENST00000640728 CDC42BPGQ6DT37 1551 aa28.5■■■□□ 2.15
SPIN3-244ENST00000640728 PLEKHG3A1L390 1219 aa28.49■■■□□ 2.15
SPIN3-244ENST00000640728 ZNF692Q9BU19 519 aaPredicted RBP28.49■■■□□ 2.15
SPIN3-244ENST00000640728 EDC4Q6P2E9 1401 aaKnown RBP28.49■■■□□ 2.15
SPIN3-244ENST00000640728 MTHFSP49914 203 aa28.48■■■□□ 2.15
SPIN3-244ENST00000640728 SENP3-EIF4A1A0A087X0R7 540 aa28.47■■■□□ 2.15
SPIN3-244ENST00000640728 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.47■■■□□ 2.15
SPIN3-244ENST00000640728 CHD2O14647 1828 aaKnown RBP28.47■■■□□ 2.15
SPIN3-244ENST00000640728 NUTM2FA1L443 756 aa28.45■■■□□ 2.14
SPIN3-244ENST00000640728 KDM4FA0A1W2PPD8 638 aa28.44■■■□□ 2.14
SPIN3-244ENST00000640728 TOPAZ1Q8N9V7 1692 aa28.42■■■□□ 2.14
SPIN3-244ENST00000640728 ACEP12821 1306 aa28.41■■■□□ 2.14
SPIN3-244ENST00000640728 CFAP53Q96M91 514 aa28.41■■■□□ 2.14
SPIN3-244ENST00000640728 ANKRD26Q9UPS8 1709 aa28.41■■■□□ 2.14
SPIN3-244ENST00000640728 SMG6Q86US8 1419 aaKnown RBP28.38■■■□□ 2.13
SPIN3-244ENST00000640728 KIF20BQ96Q89 1820 aa28.38■■■□□ 2.13
SPIN3-244ENST00000640728 MON2Q7Z3U7 1717 aa28.38■■■□□ 2.13
SPIN3-244ENST00000640728 NME9Q86XW9 330 aa28.38■■■□□ 2.13
SPIN3-244ENST00000640728 NKTRP30414 1462 aaKnown RBP28.38■■■□□ 2.13
SPIN3-244ENST00000640728 AKAP12Q02952 1782 aa28.38■■■□□ 2.13
SPIN3-244ENST00000640728 ANKARQ7Z5J8 1434 aa28.37■■■□□ 2.13
SPIN3-244ENST00000640728 SALL2Q9Y467 1007 aaPredicted RBP28.36■■■□□ 2.13
SPIN3-244ENST00000640728 NUDCQ9Y266 331 aa28.35■■■□□ 2.13
SPIN3-244ENST00000640728 PDE3BQ13370 1112 aa28.34■■■□□ 2.13
SPIN3-244ENST00000640728 ITSN1Q15811 1721 aa28.34■■■□□ 2.13
SPIN3-244ENST00000640728 TTC21BQ7Z4L5 1316 aa28.33■■■□□ 2.13
SPIN3-244ENST00000640728 USP6P35125 1406 aa28.33■■■□□ 2.13
SPIN3-244ENST00000640728 ZRANB1Q9UGI0 708 aa28.32■■■□□ 2.12
SPIN3-244ENST00000640728 SUPT16HQ9Y5B9 1047 aaKnown RBP28.32■■■□□ 2.12
SPIN3-244ENST00000640728 SHPRHQ149N8 1683 aa28.31■■■□□ 2.12
SPIN3-244ENST00000640728 PMFBP1Q8TBY8 1022 aa28.31■■■□□ 2.12
SPIN3-244ENST00000640728 RBM33Q96EV2 1170 aaKnown RBP28.31■■■□□ 2.12
SPIN3-244ENST00000640728 NWD1Q149M9 1564 aa28.31■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms