RNA–Protein interactions for RNA: ENST00000640219.1

HLA-C-210, Transcript of major histocompatibility complex, class I, C, humanhuman

BASIC

Gene HLA-C, Length 976 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-210ENST00000640219 NPHP3Q7Z494 1330 aa20.97■□□□□ 0.95
HLA-C-210ENST00000640219 ROBO2Q9HCK4 1378 aa20.96■□□□□ 0.95
HLA-C-210ENST00000640219 UNC5CLQ8IV45 518 aa20.95■□□□□ 0.94
HLA-C-210ENST00000640219 MARF1Q9Y4F3 1742 aaKnown RBP20.95■□□□□ 0.94
HLA-C-210ENST00000640219 RALGAPBQ86X10 1494 aa20.94■□□□□ 0.94
HLA-C-210ENST00000640219 ESCO1Q5FWF5 840 aa20.94■□□□□ 0.94
HLA-C-210ENST00000640219 GLI3P10071 1580 aa20.93■□□□□ 0.94
HLA-C-210ENST00000640219 XPCQ01831 940 aaPredicted RBP20.92■□□□□ 0.94
HLA-C-210ENST00000640219 NEXMIFQ5QGS0 1516 aa20.92■□□□□ 0.94
HLA-C-210ENST00000640219 PSDA5PKW4 1024 aaPredicted RBP20.91■□□□□ 0.94
HLA-C-210ENST00000640219 PXDNQ92626 1479 aa20.91■□□□□ 0.94
HLA-C-210ENST00000640219 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.91■□□□□ 0.94
HLA-C-210ENST00000640219 SPHKAPQ2M3C7 1700 aa20.9■□□□□ 0.94
HLA-C-210ENST00000640219 ROCK1Q13464 1354 aa20.9■□□□□ 0.94
HLA-C-210ENST00000640219 FOXO3O43524 673 aa20.9■□□□□ 0.94
HLA-C-210ENST00000640219 SEPT12Q8IYM1 358 aa20.9■□□□□ 0.94
HLA-C-210ENST00000640219 HRCP23327 699 aa20.89■□□□□ 0.93
HLA-C-210ENST00000640219 SLIT2O94813 1529 aa20.88■□□□□ 0.93
HLA-C-210ENST00000640219 BRWD3Q6RI45 1802 aa20.88■□□□□ 0.93
HLA-C-210ENST00000640219 HFM1A2PYH4 1435 aa20.87■□□□□ 0.93
HLA-C-210ENST00000640219 LRPPRCP42704 1394 aaKnown RBP20.85■□□□□ 0.93
HLA-C-210ENST00000640219 VGFO15240 615 aaPredicted RBP20.85■□□□□ 0.93
HLA-C-210ENST00000640219 PRAG1Q86YV5 1406 aa20.85■□□□□ 0.93
HLA-C-210ENST00000640219 BAG6P46379 1132 aa20.84■□□□□ 0.93
HLA-C-210ENST00000640219 KRT27Q7Z3Y8 459 aa20.84■□□□□ 0.93
HLA-C-210ENST00000640219 CLTCL1P53675 1640 aa20.82■□□□□ 0.92
HLA-C-210ENST00000640219 VPS72Q15906 364 aa20.82■□□□□ 0.92
HLA-C-210ENST00000640219 CCDC9Q9Y3X0 531 aaKnown RBP20.82■□□□□ 0.92
HLA-C-210ENST00000640219 CDC42BPGQ6DT37 1551 aa20.81■□□□□ 0.92
HLA-C-210ENST00000640219 ONECUT3O60422 494 aaPredicted RBP20.81■□□□□ 0.92
HLA-C-210ENST00000640219 NUTM2FA1L443 756 aa20.8■□□□□ 0.92
HLA-C-210ENST00000640219 SPATA31A3Q5VYP0 1347 aa20.79■□□□□ 0.92
HLA-C-210ENST00000640219 HAP1P54257 671 aaPredicted RBP20.79■□□□□ 0.92
HLA-C-210ENST00000640219 ITGAEP38570 1179 aa20.78■□□□□ 0.92
HLA-C-210ENST00000640219 USP32Q8NFA0 1604 aa20.78■□□□□ 0.92
HLA-C-210ENST00000640219 KIF1BO60333 1816 aa20.77■□□□□ 0.92
HLA-C-210ENST00000640219 A0A0G2JS52 829 aa20.76■□□□□ 0.91
HLA-C-210ENST00000640219 MYT1Q01538 1121 aa20.76■□□□□ 0.91
HLA-C-210ENST00000640219 NAIPQ13075 1403 aa20.76■□□□□ 0.91
HLA-C-210ENST00000640219 EN1Q05925 392 aaPredicted RBP20.75■□□□□ 0.91
HLA-C-210ENST00000640219 R3HDM1Q15032 1099 aaKnown RBP20.75■□□□□ 0.91
HLA-C-210ENST00000640219 KRT28Q7Z3Y7 464 aa20.74■□□□□ 0.91
HLA-C-210ENST00000640219 CCDC144AA2RUR9 1427 aa20.73■□□□□ 0.91
HLA-C-210ENST00000640219 RPGRIP1LQ68CZ1 1315 aa20.73■□□□□ 0.91
HLA-C-210ENST00000640219 YY1P25490 414 aa20.72■□□□□ 0.91
HLA-C-210ENST00000640219 CABLES1Q8TDN4 633 aa20.72■□□□□ 0.91
HLA-C-210ENST00000640219 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
HLA-C-210ENST00000640219 WAPLQ7Z5K2 1190 aa20.71■□□□□ 0.91
HLA-C-210ENST00000640219 NWD2Q9ULI1 1742 aa20.7■□□□□ 0.9
HLA-C-210ENST00000640219 FAM98CQ17RN3 349 aaKnown RBP20.69■□□□□ 0.9
HLA-C-210ENST00000640219 STK26Q9P289 416 aa20.69■□□□□ 0.9
HLA-C-210ENST00000640219 PLCH1Q4KWH8 1693 aa20.69■□□□□ 0.9
HLA-C-210ENST00000640219 PSME1Q06323 249 aa20.67■□□□□ 0.9
HLA-C-210ENST00000640219 TNS3Q68CZ2 1445 aa20.67■□□□□ 0.9
HLA-C-210ENST00000640219 KIF1AQ12756 1690 aa20.67■□□□□ 0.9
HLA-C-210ENST00000640219 FAM83GA6ND36 823 aa20.66■□□□□ 0.9
HLA-C-210ENST00000640219 RRBP1Q9P2E9 1410 aaKnown RBP20.65■□□□□ 0.9
HLA-C-210ENST00000640219 FAM182BQ5T319 152 aa20.65■□□□□ 0.9
HLA-C-210ENST00000640219 LMOD2Q6P5Q4 547 aa20.65■□□□□ 0.9
HLA-C-210ENST00000640219 RGPD1P0DJD0 1748 aa20.64■□□□□ 0.9
HLA-C-210ENST00000640219 PLEKHH1Q9ULM0 1364 aa20.63■□□□□ 0.89
HLA-C-210ENST00000640219 EZH2Q15910 746 aaKnown RBP20.63■□□□□ 0.89
HLA-C-210ENST00000640219 PHF8Q9UPP1 1060 aa20.63■□□□□ 0.89
HLA-C-210ENST00000640219 PPLO60437 1756 aa20.63■□□□□ 0.89
HLA-C-210ENST00000640219 FMN2Q9NZ56 1722 aa20.63■□□□□ 0.89
HLA-C-210ENST00000640219 DISP2A7MBM2 1401 aa20.62■□□□□ 0.89
HLA-C-210ENST00000640219 TECPR2O15040 1411 aa20.62■□□□□ 0.89
HLA-C-210ENST00000640219 SBNO1A3KN83 1393 aa20.6■□□□□ 0.89
HLA-C-210ENST00000640219 ARHGEF10O15013 1369 aa20.6■□□□□ 0.89
HLA-C-210ENST00000640219 BTG4Q9NY30 223 aa20.6■□□□□ 0.89
HLA-C-210ENST00000640219 ABCC11Q96J66 1382 aa20.59■□□□□ 0.89
HLA-C-210ENST00000640219 ADGRF5Q8IZF2 1346 aa20.59■□□□□ 0.89
HLA-C-210ENST00000640219 ABCA3Q99758 1704 aa20.58■□□□□ 0.89
HLA-C-210ENST00000640219 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.89
HLA-C-210ENST00000640219 NRAPQ86VF7 1730 aa20.57■□□□□ 0.88
HLA-C-210ENST00000640219 CAMKK2Q96RR4 588 aa20.57■□□□□ 0.88
HLA-C-210ENST00000640219 TNS1Q9HBL0 1735 aaKnown RBP20.56■□□□□ 0.88
HLA-C-210ENST00000640219 SPATA31A5Q5VU36 1347 aa20.54■□□□□ 0.88
HLA-C-210ENST00000640219 SPATA31A7Q8IWB4 1347 aa20.54■□□□□ 0.88
HLA-C-210ENST00000640219 DCAF8L1A6NGE4 600 aa20.54■□□□□ 0.88
HLA-C-210ENST00000640219 TRIM37O94972 964 aa20.54■□□□□ 0.88
HLA-C-210ENST00000640219 NRXN1Q9ULB1 1477 aa20.54■□□□□ 0.88
HLA-C-210ENST00000640219 KNDC1Q76NI1 1749 aa20.53■□□□□ 0.88
HLA-C-210ENST00000640219 RGPD8O14715 1765 aaPredicted RBP20.53■□□□□ 0.88
HLA-C-210ENST00000640219 ADGRB2O60241 1585 aa20.52■□□□□ 0.88
HLA-C-210ENST00000640219 APBA3O96018 575 aa20.52■□□□□ 0.88
HLA-C-210ENST00000640219 PARD3Q8TEW0 1356 aa20.51■□□□□ 0.87
HLA-C-210ENST00000640219 FAM196AQ6ZSG2 479 aa20.51■□□□□ 0.87
HLA-C-210ENST00000640219 PPP1R1BQ9UD71 204 aaPredicted RBP20.51■□□□□ 0.87
HLA-C-210ENST00000640219 YTHDC2Q9H6S0 1430 aaKnown RBP20.51■□□□□ 0.87
HLA-C-210ENST00000640219 IFT172Q9UG01 1749 aa20.5■□□□□ 0.87
HLA-C-210ENST00000640219 COL14A1Q05707 1796 aaKnown RBP20.5■□□□□ 0.87
HLA-C-210ENST00000640219 RGL3Q3MIN7 710 aa20.5■□□□□ 0.87
HLA-C-210ENST00000640219 SIRT1Q96EB6 747 aa20.5■□□□□ 0.87
HLA-C-210ENST00000640219 SLC4A1APQ9BWU0 796 aaKnown RBP20.5■□□□□ 0.87
HLA-C-210ENST00000640219 THSD7AQ9UPZ6 1657 aa20.5■□□□□ 0.87
HLA-C-210ENST00000640219 PMFBP1Q8TBY8 1022 aa20.49■□□□□ 0.87
HLA-C-210ENST00000640219 NBPF8Q3BBV2 869 aa20.48■□□□□ 0.87
HLA-C-210ENST00000640219 NBPF14Q5TI25 921 aa20.48■□□□□ 0.87
HLA-C-210ENST00000640219 ANKRD30BQ9BXX2 1392 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms