RNA–Protein interactions for RNA: ENST00000639370.1

KCNMA1-258, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5

Gene KCNMA1, Length 3,624 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-258ENST00000639370 SMC4Q9NTJ3 1288 aa12.96□□□□□ -0.33
KCNMA1-258ENST00000639370 TRPM2O94759 1503 aa12.96□□□□□ -0.34
KCNMA1-258ENST00000639370 PTPRTO14522 1441 aa12.95□□□□□ -0.34
KCNMA1-258ENST00000639370 TMEM132EQ6IEE7 984 aa12.95□□□□□ -0.34
KCNMA1-258ENST00000639370 RSPH6AQ9H0K4 717 aa12.95□□□□□ -0.34
KCNMA1-258ENST00000639370 ERVK-7P63135 1459 aa12.95□□□□□ -0.34
KCNMA1-258ENST00000639370 IQGAP1P46940 1657 aa12.95□□□□□ -0.34
KCNMA1-258ENST00000639370 GOLGA6L3A6NEY3 463 aa12.95□□□□□ -0.34
KCNMA1-258ENST00000639370 MVPQ14764 893 aaKnown RBP12.95□□□□□ -0.34
KCNMA1-258ENST00000639370 ITPRIPQ8IWB1 547 aa12.95□□□□□ -0.34
KCNMA1-258ENST00000639370 C22orf23Q9BZE7 217 aa12.94□□□□□ -0.34
KCNMA1-258ENST00000639370 KDM5AP29375 1690 aaKnown RBP12.94□□□□□ -0.34
KCNMA1-258ENST00000639370 RTEL1-TNFRSF6BF6WH68 1400 aa12.93□□□□□ -0.34
KCNMA1-258ENST00000639370 HSCBQ8IWL3 235 aa12.93□□□□□ -0.34
KCNMA1-258ENST00000639370 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
KCNMA1-258ENST00000639370 SENP3Q9H4L4 574 aaPredicted RBP12.92□□□□□ -0.34
KCNMA1-258ENST00000639370 SAFB2Q14151 953 aaKnown RBP eCLIP12.92□□□□□ -0.34
KCNMA1-258ENST00000639370 GGT6Q6P531 493 aa12.92□□□□□ -0.34
KCNMA1-258ENST00000639370 CHMP5Q9NZZ3 219 aa12.92□□□□□ -0.34
KCNMA1-258ENST00000639370 CLTCL1P53675 1640 aa12.91□□□□□ -0.34
KCNMA1-258ENST00000639370 MCM4P33991 863 aa12.91□□□□□ -0.34
KCNMA1-258ENST00000639370 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-258ENST00000639370 CCDC27Q2M243 656 aa12.9□□□□□ -0.34
KCNMA1-258ENST00000639370 NUTM2DQ5VT03 806 aaPredicted RBP12.9□□□□□ -0.34
KCNMA1-258ENST00000639370 ANTXR1Q9H6X2 564 aa12.9□□□□□ -0.34
KCNMA1-258ENST00000639370 DDX19BQ9UMR2 479 aa12.9□□□□□ -0.34
KCNMA1-258ENST00000639370 ABCC1P33527 1531 aa12.9□□□□□ -0.34
KCNMA1-258ENST00000639370 HSP90AA1P07900 732 aaKnown RBP12.9□□□□□ -0.34
KCNMA1-258ENST00000639370 EVC2Q86UK5 1308 aa12.89□□□□□ -0.35
KCNMA1-258ENST00000639370 SPHKAPQ2M3C7 1700 aa12.89□□□□□ -0.35
KCNMA1-258ENST00000639370 NOS1P29475 1434 aa12.89□□□□□ -0.35
KCNMA1-258ENST00000639370 IPO8O15397 1037 aaKnown RBP12.88□□□□□ -0.35
KCNMA1-258ENST00000639370 TRAK2O60296 914 aa12.88□□□□□ -0.35
KCNMA1-258ENST00000639370 SRPK2P78362 688 aaKnown RBP12.88□□□□□ -0.35
KCNMA1-258ENST00000639370 CT47B1P0C2W7 299 aaPredicted RBP12.87□□□□□ -0.35
KCNMA1-258ENST00000639370 CABP2Q9NPB3 220 aa12.87□□□□□ -0.35
KCNMA1-258ENST00000639370 C14orf93Q9H972 538 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-258ENST00000639370 UGGT1Q9NYU2 1555 aa12.87□□□□□ -0.35
KCNMA1-258ENST00000639370 SBNO2Q9Y2G9 1366 aa12.87□□□□□ -0.35
KCNMA1-258ENST00000639370 ATF7IPQ6VMQ6 1270 aa12.87□□□□□ -0.35
KCNMA1-258ENST00000639370 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
KCNMA1-258ENST00000639370 NOB1Q9ULX3 412 aaKnown RBP12.87□□□□□ -0.35
KCNMA1-258ENST00000639370 ERCC6L2Q5T890 1561 aa12.86□□□□□ -0.35
KCNMA1-258ENST00000639370 HSP90AB1P08238 724 aaKnown RBP12.86□□□□□ -0.35
KCNMA1-258ENST00000639370 TRIM27P14373 513 aa12.86□□□□□ -0.35
KCNMA1-258ENST00000639370 SSH1Q8WYL5 1049 aa12.86□□□□□ -0.35
KCNMA1-258ENST00000639370 MYOM1P52179 1685 aa12.86□□□□□ -0.35
KCNMA1-258ENST00000639370 STK26Q9P289 416 aa12.86□□□□□ -0.35
KCNMA1-258ENST00000639370 ZMYM3Q14202 1370 aa12.86□□□□□ -0.35
KCNMA1-258ENST00000639370 CEP152O94986 1710 aa12.86□□□□□ -0.35
KCNMA1-258ENST00000639370 XRCC6P12956 609 aaKnown RBP eCLIP12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 NAP1L5Q96NT1 182 aaPredicted RBP12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 GGNBP2Q9H3C7 697 aa12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 TMPOP42166 694 aaKnown RBP12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 RIPK4P57078 832 aa12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 FANCAO15360 1455 aa12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 MYOM2P54296 1465 aa12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 DDX11L8A8MPP1 907 aa12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 LNPKQ9C0E8 428 aa12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 PNNQ9H307 717 aaKnown RBP12.85□□□□□ -0.35
KCNMA1-258ENST00000639370 ZFYVE16Q7Z3T8 1539 aa12.84□□□□□ -0.35
KCNMA1-258ENST00000639370 RRAGDQ9NQL2 400 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-258ENST00000639370 HDAC1Q13547 482 aaPredicted RBP12.84□□□□□ -0.35
KCNMA1-258ENST00000639370 MAP3K4Q9Y6R4 1608 aa12.84□□□□□ -0.35
KCNMA1-258ENST00000639370 TET3O43151 1660 aa12.84□□□□□ -0.35
KCNMA1-258ENST00000639370 TMEM57Q8N5G2 664 aa12.83□□□□□ -0.35
KCNMA1-258ENST00000639370 VGFO15240 615 aaPredicted RBP12.83□□□□□ -0.36
KCNMA1-258ENST00000639370 ATP7AQ04656 1500 aa12.83□□□□□ -0.36
KCNMA1-258ENST00000639370 ADGRL1O94910 1474 aa12.82□□□□□ -0.36
KCNMA1-258ENST00000639370 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
KCNMA1-258ENST00000639370 MRE11P49959 708 aa12.82□□□□□ -0.36
KCNMA1-258ENST00000639370 SHROOM2Q13796 1616 aa12.82□□□□□ -0.36
KCNMA1-258ENST00000639370 TRIM44Q96DX7 344 aaPredicted RBP12.82□□□□□ -0.36
KCNMA1-258ENST00000639370 PANK2Q9BZ23 570 aa12.82□□□□□ -0.36
KCNMA1-258ENST00000639370 ZNF518AQ6AHZ1 1483 aa12.82□□□□□ -0.36
KCNMA1-258ENST00000639370 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
KCNMA1-258ENST00000639370 ABCA6Q8N139 1617 aa12.81□□□□□ -0.36
KCNMA1-258ENST00000639370 GBP4Q96PP9 640 aa12.81□□□□□ -0.36
KCNMA1-258ENST00000639370 ZCCHC11Q5TAX3 1644 aaKnown RBP12.81□□□□□ -0.36
KCNMA1-258ENST00000639370 NCBP3Q53F19 620 aaKnown RBP12.81□□□□□ -0.36
KCNMA1-258ENST00000639370 ANKRD45Q5TZF3 282 aa12.81□□□□□ -0.36
KCNMA1-258ENST00000639370 KIAA1210Q9ULL0 1709 aa12.81□□□□□ -0.36
KCNMA1-258ENST00000639370 CHD1O14646 1710 aa12.8□□□□□ -0.36
KCNMA1-258ENST00000639370 FOXD4L1Q9NU39 408 aa12.8□□□□□ -0.36
KCNMA1-258ENST00000639370 TERF2IPQ9NYB0 399 aa12.8□□□□□ -0.36
KCNMA1-258ENST00000639370 RPGRIP1LQ68CZ1 1315 aa12.8□□□□□ -0.36
KCNMA1-258ENST00000639370 DIAPH1O60610 1272 aaKnown RBP12.8□□□□□ -0.36
KCNMA1-258ENST00000639370 SMC5Q8IY18 1101 aa12.8□□□□□ -0.36
KCNMA1-258ENST00000639370 ANKRD36BQ8N2N9 1353 aa12.8□□□□□ -0.36
KCNMA1-258ENST00000639370 NSD2O96028 1365 aa12.79□□□□□ -0.36
KCNMA1-258ENST00000639370 NPM1P06748 294 aaKnown RBP eCLIP12.79□□□□□ -0.36
KCNMA1-258ENST00000639370 CHMP4BQ9H444 224 aaKnown RBP12.79□□□□□ -0.36
KCNMA1-258ENST00000639370 CHD1LQ86WJ1 897 aa12.79□□□□□ -0.36
KCNMA1-258ENST00000639370 TRIM35Q9UPQ4 493 aa12.79□□□□□ -0.36
KCNMA1-258ENST00000639370 IQSEC2Q5JU85 1478 aa12.78□□□□□ -0.36
KCNMA1-258ENST00000639370 GRPEL1Q9HAV7 217 aa12.78□□□□□ -0.36
KCNMA1-258ENST00000639370 ZBTB40Q9NUA8 1239 aa12.78□□□□□ -0.36
KCNMA1-258ENST00000639370 FSD2A1L4K1 749 aa12.77□□□□□ -0.36
KCNMA1-258ENST00000639370 UHRF1BP1LA0JNW5 1464 aa12.77□□□□□ -0.36
KCNMA1-258ENST00000639370 GOLGA6L22H0YM25 854 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms