RNA–Protein interactions for RNA: ENST00000638708.1

STRADA-231, Transcript of STE20-related kinase adaptor alpha, human

TSL 2 BASIC

Gene STRADA, Length 2,153 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
STRADA-231	ENST00000638708	RWDD1	Q9H446	243 aa	Predicted RBP	13.96	□□□□□ -0.17
STRADA-231	ENST00000638708	PCDHB15	Q9Y5E8	787 aa		13.96	□□□□□ -0.17
STRADA-231	ENST00000638708	MSN	P26038	577 aa	Known RBP	13.96	□□□□□ -0.18
STRADA-231	ENST00000638708	SMC5	Q8IY18	1101 aa		13.96	□□□□□ -0.18
STRADA-231	ENST00000638708	TNPO1	Q92973	898 aa	Known RBP	13.96	□□□□□ -0.18
STRADA-231	ENST00000638708	SNX21	Q969T3	373 aa		13.96	□□□□□ -0.18
STRADA-231	ENST00000638708	ZNF777	Q9ULD5	760 aa	Predicted RBP	13.95	□□□□□ -0.18
STRADA-231	ENST00000638708	RAB3GAP1	Q15042	981 aa		13.95	□□□□□ -0.18
STRADA-231	ENST00000638708	HS1BP3	Q53T59	392 aa		13.95	□□□□□ -0.18
STRADA-231	ENST00000638708	PLA2R1	Q13018	1463 aa		13.95	□□□□□ -0.18
STRADA-231	ENST00000638708	ABCA8	O94911	1581 aa		13.94	□□□□□ -0.18
STRADA-231	ENST00000638708	PLEKHD1	A6NEE1	506 aa		13.94	□□□□□ -0.18
STRADA-231	ENST00000638708	NASP	P49321	788 aa	Predicted RBP	13.94	□□□□□ -0.18
STRADA-231	ENST00000638708	MFAP1	P55081	439 aa	Known RBP	13.94	□□□□□ -0.18
STRADA-231	ENST00000638708	ANP32B	Q92688	251 aa	Known RBP	13.94	□□□□□ -0.18
STRADA-231	ENST00000638708	DMRT2	Q9Y5R5	561 aa		13.93	□□□□□ -0.18
STRADA-231	ENST00000638708	ARHGAP31	Q2M1Z3	1444 aa		13.93	□□□□□ -0.18
STRADA-231	ENST00000638708	IQGAP3	Q86VI3	1631 aa		13.93	□□□□□ -0.18
STRADA-231	ENST00000638708	KDM5A	P29375	1690 aa	Known RBP	13.93	□□□□□ -0.18
STRADA-231	ENST00000638708	MADD	Q8WXG6	1647 aa		13.92	□□□□□ -0.18
STRADA-231	ENST00000638708	CEP152	O94986	1710 aa		13.92	□□□□□ -0.18
STRADA-231	ENST00000638708	ATP10B	O94823	1461 aa		13.91	□□□□□ -0.18
STRADA-231	ENST00000638708	ZNF500	O60304	480 aa	Predicted RBP	13.91	□□□□□ -0.18
STRADA-231	ENST00000638708	RARS	P54136	660 aa	Known RBP	13.91	□□□□□ -0.18
STRADA-231	ENST00000638708	SHPRH	Q149N8	1683 aa		13.91	□□□□□ -0.18
STRADA-231	ENST00000638708	RBM25	P49756	843 aa	Known RBP	13.9	□□□□□ -0.18
STRADA-231	ENST00000638708	CDCA8	Q53HL2	280 aa		13.9	□□□□□ -0.18
STRADA-231	ENST00000638708	IQSEC2	Q5JU85	1478 aa		13.9	□□□□□ -0.18
STRADA-231	ENST00000638708	FAM13B	Q9NYF5	915 aa		13.9	□□□□□ -0.18
STRADA-231	ENST00000638708	ATP10A	O60312	1499 aa		13.89	□□□□□ -0.19
STRADA-231	ENST00000638708	DYNC1I1	O14576	645 aa		13.89	□□□□□ -0.19
STRADA-231	ENST00000638708	RLBP1	P12271	317 aa		13.89	□□□□□ -0.19
STRADA-231	ENST00000638708	R3HCC1	Q9Y3T6	440 aa	Known RBP	13.89	□□□□□ -0.19
STRADA-231	ENST00000638708	UQCRHL	A0A096LP55	91 aa		13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	UQCRH	P07919	91 aa		13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	RGL3	Q3MIN7	710 aa		13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	CLEC17A	Q6ZS10	378 aa		13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	WWC1	Q8IX03	1113 aa		13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	HSP90AB1	P08238	724 aa	Known RBP	13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	TSPY4	P0CV99	314 aa		13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	TSPY10	P0CW01	314 aa		13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	UTP14C	Q5TAP6	766 aa	Known RBP	13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	NOL7	Q9UMY1	257 aa	Known RBP	13.88	□□□□□ -0.19
STRADA-231	ENST00000638708	GOLGA6L22	H0YM25	854 aa		13.87	□□□□□ -0.19
STRADA-231	ENST00000638708	KLHL40	Q2TBA0	621 aa		13.87	□□□□□ -0.19
STRADA-231	ENST00000638708	SPHKAP	Q2M3C7	1700 aa		13.87	□□□□□ -0.19
STRADA-231	ENST00000638708	CSPP1	Q1MSJ5	1256 aa		13.86	□□□□□ -0.19
STRADA-231	ENST00000638708	MAST1	Q9Y2H9	1570 aa		13.86	□□□□□ -0.19
STRADA-231	ENST00000638708	KANK1	Q14678	1352 aa		13.86	□□□□□ -0.19
STRADA-231	ENST00000638708	DUOX2	Q9NRD8	1548 aa		13.86	□□□□□ -0.19
STRADA-231	ENST00000638708		A0A0U1RQG5	324 aa	Predicted RBP	13.86	□□□□□ -0.19
STRADA-231	ENST00000638708	ZNF445	P59923	1031 aa		13.86	□□□□□ -0.19
STRADA-231	ENST00000638708	MVP	Q14764	893 aa	Known RBP	13.86	□□□□□ -0.19
STRADA-231	ENST00000638708	TTC37	Q6PGP7	1564 aa		13.86	□□□□□ -0.19
STRADA-231	ENST00000638708	CFAP74	Q9C0B2	1584 aa		13.86	□□□□□ -0.19
STRADA-231	ENST00000638708	SCAF11	Q99590	1463 aa	Known RBP	13.85	□□□□□ -0.19
STRADA-231	ENST00000638708	PDLIM2	Q96JY6	352 aa		13.85	□□□□□ -0.19
STRADA-231	ENST00000638708	TNN	Q9UQP3	1299 aa		13.85	□□□□□ -0.19
STRADA-231	ENST00000638708	POLR3A	O14802	1390 aa	Predicted RBP	13.85	□□□□□ -0.19
STRADA-231	ENST00000638708	MCM5	P33992	734 aa		13.85	□□□□□ -0.19
STRADA-231	ENST00000638708	HDAC1	Q13547	482 aa	Predicted RBP	13.84	□□□□□ -0.19
STRADA-231	ENST00000638708	ERCC6L2	Q5T890	1561 aa		13.84	□□□□□ -0.19
STRADA-231	ENST00000638708	DMTN	Q08495	405 aa		13.83	□□□□□ -0.2
STRADA-231	ENST00000638708	SASS6	Q6UVJ0	657 aa		13.83	□□□□□ -0.2
STRADA-231	ENST00000638708	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.83	□□□□□ -0.2
STRADA-231	ENST00000638708	SAMD9L	Q8IVG5	1584 aa		13.83	□□□□□ -0.2
STRADA-231	ENST00000638708	PHF23	Q9BUL5	403 aa	Predicted RBP	13.82	□□□□□ -0.2
STRADA-231	ENST00000638708	ZKSCAN5	Q9Y2L8	839 aa		13.82	□□□□□ -0.2
STRADA-231	ENST00000638708	KIAA1210	Q9ULL0	1709 aa		13.82	□□□□□ -0.2
STRADA-231	ENST00000638708	FGD1	P98174	961 aa		13.82	□□□□□ -0.2
STRADA-231	ENST00000638708	WDR63	Q8IWG1	891 aa		13.82	□□□□□ -0.2
STRADA-231	ENST00000638708	PREX2	Q70Z35	1606 aa		13.82	□□□□□ -0.2
STRADA-231	ENST00000638708	CCDC94	Q9BW85	323 aa	Predicted RBP	13.81	□□□□□ -0.2
STRADA-231	ENST00000638708	DDX49	Q9Y6V7	483 aa	Known RBP	13.81	□□□□□ -0.2
STRADA-231	ENST00000638708		K7ELQ4	463 aa	Predicted RBP	13.81	□□□□□ -0.2
STRADA-231	ENST00000638708	XPC	Q01831	940 aa	Predicted RBP	13.81	□□□□□ -0.2
STRADA-231	ENST00000638708	SSFA2	P28290	1259 aa		13.8	□□□□□ -0.2
STRADA-231	ENST00000638708	BAG4	O95429	457 aa	Known RBP	13.79	□□□□□ -0.2
STRADA-231	ENST00000638708	ZKSCAN2	Q63HK3	967 aa		13.79	□□□□□ -0.2
STRADA-231	ENST00000638708	CDC42BPB	Q9Y5S2	1711 aa		13.79	□□□□□ -0.2
STRADA-231	ENST00000638708	RERE	Q9P2R6	1566 aa		13.79	□□□□□ -0.2
STRADA-231	ENST00000638708	DZIP1L	Q8IYY4	767 aa	Known RBP	13.78	□□□□□ -0.2
STRADA-231	ENST00000638708	RUNDC1	Q96C34	613 aa		13.78	□□□□□ -0.2
STRADA-231	ENST00000638708	KIF2C	Q99661	725 aa		13.78	□□□□□ -0.2
STRADA-231	ENST00000638708	ADGRB2	O60241	1585 aa		13.78	□□□□□ -0.2
STRADA-231	ENST00000638708	CCDC27	Q2M243	656 aa		13.78	□□□□□ -0.2
STRADA-231	ENST00000638708	BCL2L13	Q9BXK5	485 aa		13.78	□□□□□ -0.2
STRADA-231	ENST00000638708	ZSCAN23	Q3MJ62	389 aa		13.77	□□□□□ -0.21
STRADA-231	ENST00000638708	NCBP3	Q53F19	620 aa	Known RBP	13.77	□□□□□ -0.21
STRADA-231	ENST00000638708	FTSJ3	Q8IY81	847 aa	Known RBP	13.77	□□□□□ -0.21
STRADA-231	ENST00000638708	CCDC39	Q9UFE4	941 aa		13.77	□□□□□ -0.21
STRADA-231	ENST00000638708	ZHX1	Q9UKY1	873 aa	Predicted RBP	13.77	□□□□□ -0.21
STRADA-231	ENST00000638708	CT47B1	P0C2W7	299 aa	Predicted RBP	13.76	□□□□□ -0.21
STRADA-231	ENST00000638708	NCL	P19338	710 aa	Known RBP	13.76	□□□□□ -0.21
STRADA-231	ENST00000638708	AK9	Q5TCS8	1911 aa		13.76	□□□□□ -0.21
STRADA-231	ENST00000638708	KIF16B	Q96L93	1317 aa		13.76	□□□□□ -0.21
STRADA-231	ENST00000638708	RBSN	Q9H1K0	784 aa		13.76	□□□□□ -0.21
STRADA-231	ENST00000638708	PRDM10	Q9NQV6	1147 aa		13.76	□□□□□ -0.21
STRADA-231	ENST00000638708	ADGRL1	O94910	1474 aa		13.75	□□□□□ -0.21
STRADA-231	ENST00000638708	ZSCAN20	P17040	1043 aa	Predicted RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms