RNA–Protein interactions for RNA: ENST00000628915.2

R3HDM1-220, Transcript of R3H domain containing 1, humanhuman

TSL 5 BASIC

Gene R3HDM1, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-220ENST00000628915 SGSM3Q96HU1 749 aa4.83□□□□□ -1.64
R3HDM1-220ENST00000628915 STK24Q9Y6E0 443 aa4.83□□□□□ -1.64
R3HDM1-220ENST00000628915 GOLGA6CA6NDK9 693 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 GOLGA6BA6NDN3 693 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 KIF20AO95235 890 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 GOLGA6DP0CG33 693 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 ZNF280DQ6N043 979 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 GOLGA6AQ9NYA3 693 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 CENPJQ9HC77 1338 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 GOLGA6L3A6NEY3 463 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 GOLGA6L6A8MZA4 724 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 CHGAP10645 457 aaKnown RBP4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 IFNLR1Q8IU57 520 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 CARD10Q9BWT7 1032 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 TSPYL1Q9H0U9 437 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 WWC3Q9ULE0 1092 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 WDHD1O75717 1129 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 PPP1R15AO75807 674 aaPredicted RBP4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 CSB-PGBD3P0DP91 1061 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 MICAL1Q8TDZ2 1067 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 KDM5BQ9UGL1 1544 aa4.82□□□□□ -1.64
R3HDM1-220ENST00000628915 SATB1Q01826 763 aa4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 MEX3CQ5U5Q3 659 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 SLC52A1Q9NWF4 448 aa4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 GOLGA6L22H0YM25 854 aa4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 HAX1O00165 279 aa4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 ECM2O94769 699 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 STK10O94804 968 aaKnown RBP4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 ZRANB2O95218 330 aaKnown RBP eCLIP4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 ZNF771Q7L3S4 317 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 PROM2Q8N271 834 aa4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 NGEFQ8N5V2 710 aa4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 FAM13BQ9NYF5 915 aa4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 MAP3K4Q9Y6R4 1608 aa4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 LETM1O95202 739 aaPredicted RBP4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 KRBA2Q6ZNG9 492 aa4.81□□□□□ -1.64
R3HDM1-220ENST00000628915 CCDC66A2RUB6 948 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 KIAA2012Q0VF49 1180 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 MFSD4BQ5TF39 518 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 MORC4Q8TE76 937 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 ACRBPQ8NEB7 543 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 FRAT1Q92837 279 aaPredicted RBP4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 HIRIP3Q9BW71 556 aaPredicted RBP4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 CEP170Q5SW79 1584 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 ARHGEF11O15085 1522 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 KIAA0586Q9BVV6 1533 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 MYBPC2Q14324 1141 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 ZKSCAN2Q63HK3 967 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 ATL2Q8NHH9 583 aa4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 CALR3Q96L12 384 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 METTL14Q9HCE5 456 aaKnown RBP4.8□□□□□ -1.64
R3HDM1-220ENST00000628915 UGGT2Q9NYU1 1516 aa4.79□□□□□ -1.64
R3HDM1-220ENST00000628915 IPO8O15397 1037 aaKnown RBP4.79□□□□□ -1.64
R3HDM1-220ENST00000628915 SLC24A3Q9HC58 644 aa4.79□□□□□ -1.64
R3HDM1-220ENST00000628915 LONRF3Q496Y0 759 aa4.79□□□□□ -1.64
R3HDM1-220ENST00000628915 GOLGA6L1Q8N7Z2 621 aa4.79□□□□□ -1.64
R3HDM1-220ENST00000628915 MTA3Q9BTC8 594 aa4.79□□□□□ -1.64
R3HDM1-220ENST00000628915 CIZ1Q9ULV3 898 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-220ENST00000628915 MYCBPQ99417 103 aaPredicted RBP4.79□□□□□ -1.64
R3HDM1-220ENST00000628915 MS4A1P11836 297 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 NFKBIBQ15653 356 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 MSL3Q8N5Y2 521 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 CFAP53Q96M91 514 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 RIOK3O14730 519 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 PAX3P23760 479 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 KCNJ4P48050 445 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 UTP14CQ5TAP6 766 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 PDILTQ8N807 584 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 PROCA1Q8NCQ7 364 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 CHMP4CQ96CF2 233 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 SAMD9Q5K651 1589 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 CFAP43Q8NDM7 1665 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 TMCO5BA8MYB1 307 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 CCP110O43303 1012 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 SETSIPP0DME0 302 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 ERCC3P19447 782 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 GTF2A1P52655 376 aaPredicted RBP4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 GEMIN8Q9NWZ8 242 aaKnown RBP4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 TPM3P06753 285 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 SSFA2P28290 1259 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 HSP90AB2PQ58FF8 381 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 GOLGA3Q08378 1498 aa4.78□□□□□ -1.64
R3HDM1-220ENST00000628915 TRIM6-TRIM34B2RNG4 842 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 H0YHG0 523 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 SARNPP82979 210 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 CCDC96Q2M329 555 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 TRIM34Q9BYJ4 488 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 GTPBP4Q9BZE4 634 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 EPB41L2O43491 1005 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 CT47B1P0C2W7 299 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 CLCN1P35523 988 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 PSEN1P49768 467 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 ANAPC4Q9UJX5 808 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 BCORL1Q5H9F3 1711 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 ARAP3Q8WWN8 1544 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 HTATSF1O43719 755 aaKnown RBP4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 CLCN6P51797 869 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 RAI14Q9P0K7 980 aa4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 FARP1Q9Y4F1 1045 aaPredicted RBP4.77□□□□□ -1.65
R3HDM1-220ENST00000628915 CEP83Q9Y592 693 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms