RNA–Protein interactions for RNA: ENST00000625842.2

VPS8-227, Transcript of VPS8, CORVET complex subunit, humanhuman

APPRIS P4 TSL 5 BASIC

Gene VPS8, Length 4,969 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-227ENST00000625842 CNNM1Q9NRU3 951 aa13.52□□□□□ -0.25
VPS8-227ENST00000625842 TEX14Q8IWB6 1497 aa13.52□□□□□ -0.25
VPS8-227ENST00000625842 SCAPERQ9BY12 1400 aa13.51□□□□□ -0.25
VPS8-227ENST00000625842 CCDC30Q5VVM6 783 aa13.51□□□□□ -0.25
VPS8-227ENST00000625842 SLC26A8Q96RN1 970 aa13.51□□□□□ -0.25
VPS8-227ENST00000625842 RAPGEF3O95398 923 aa13.51□□□□□ -0.25
VPS8-227ENST00000625842 NEUROD6Q96NK8 337 aa13.51□□□□□ -0.25
VPS8-227ENST00000625842 A0A0U1RQG5 324 aaPredicted RBP13.5□□□□□ -0.25
VPS8-227ENST00000625842 FAM177BA6PVY3 158 aa13.5□□□□□ -0.25
VPS8-227ENST00000625842 ZKSCAN2Q63HK3 967 aa13.5□□□□□ -0.25
VPS8-227ENST00000625842 E9PSI1 815 aa13.5□□□□□ -0.25
VPS8-227ENST00000625842 PANK3Q9H999 370 aa13.5□□□□□ -0.25
VPS8-227ENST00000625842 KANK4Q5T7N3 995 aaPredicted RBP13.49□□□□□ -0.25
VPS8-227ENST00000625842 AK7Q96M32 723 aa13.49□□□□□ -0.25
VPS8-227ENST00000625842 RDXP35241 583 aaKnown RBP13.49□□□□□ -0.25
VPS8-227ENST00000625842 AIMP1Q12904 312 aaKnown RBP13.49□□□□□ -0.25
VPS8-227ENST00000625842 ZSCAN29Q8IWY8 852 aaPredicted RBP13.49□□□□□ -0.25
VPS8-227ENST00000625842 ZNF287Q9HBT7 754 aa13.49□□□□□ -0.25
VPS8-227ENST00000625842 NBR1Q14596 966 aa13.49□□□□□ -0.25
VPS8-227ENST00000625842 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.49□□□□□ -0.252e-6■■■■□ 21.9
VPS8-227ENST00000625842 RAD54L2Q9Y4B4 1467 aa13.49□□□□□ -0.25
VPS8-227ENST00000625842 A0A087WZG4 1122 aa13.49□□□□□ -0.25
VPS8-227ENST00000625842 NF2P35240 595 aa13.49□□□□□ -0.25
VPS8-227ENST00000625842 NACAP1Q9BZK3 213 aa13.49□□□□□ -0.25
VPS8-227ENST00000625842 WASHC4Q2M389 1173 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 SLF2Q8IX21 1173 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 RCAN3Q9UKA8 241 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 IPO7O95373 1038 aaKnown RBP13.48□□□□□ -0.25
VPS8-227ENST00000625842 RIPK4P57078 832 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 ZNF530Q6P9A1 599 aaPredicted RBP13.48□□□□□ -0.25
VPS8-227ENST00000625842 IGF1RP08069 1367 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 IGHMBP2P38935 993 aaKnown RBP13.48□□□□□ -0.25
VPS8-227ENST00000625842 MTHFSP49914 203 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 ODF2Q5BJF6 829 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 CCDC158Q5M9N0 1113 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 CREBRFQ8IUR6 639 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 TMOD3Q9NYL9 352 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 RAB3GAP2Q9H2M9 1393 aa13.48□□□□□ -0.25
VPS8-227ENST00000625842 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.48□□□□□ -0.254e-8■■■■■ 152.9
VPS8-227ENST00000625842 HSP90AB3PQ58FF7 597 aa13.47□□□□□ -0.25
VPS8-227ENST00000625842 ELL2O00472 640 aaPredicted RBP13.47□□□□□ -0.25
VPS8-227ENST00000625842 PES1O00541 588 aaKnown RBP13.47□□□□□ -0.25
VPS8-227ENST00000625842 ANKRD50Q9ULJ7 1429 aa13.47□□□□□ -0.25
VPS8-227ENST00000625842 ZSCAN25Q6NSZ9 544 aa13.47□□□□□ -0.25
VPS8-227ENST00000625842 CUX1P39880 1505 aa13.47□□□□□ -0.25
VPS8-227ENST00000625842 B4GALNT3Q6L9W6 998 aa13.47□□□□□ -0.25
VPS8-227ENST00000625842 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
VPS8-227ENST00000625842 RILPL2Q969X0 211 aa13.47□□□□□ -0.25
VPS8-227ENST00000625842 PLIN1O60240 522 aa13.46□□□□□ -0.25
VPS8-227ENST00000625842 GNAI3P08754 354 aa13.46□□□□□ -0.25
VPS8-227ENST00000625842 MPHOSPH6Q99547 160 aaKnown RBP13.46□□□□□ -0.25
VPS8-227ENST00000625842 CDK19Q9BWU1 502 aa13.46□□□□□ -0.25
VPS8-227ENST00000625842 RTEL1-TNFRSF6BF6WH68 1400 aa13.46□□□□□ -0.25
VPS8-227ENST00000625842 TEX13AQ9BXU3 409 aaPredicted RBP13.46□□□□□ -0.25
VPS8-227ENST00000625842 C11orf95C9JLR9 678 aaPredicted RBP13.46□□□□□ -0.26
VPS8-227ENST00000625842 ATF7IPQ6VMQ6 1270 aa13.46□□□□□ -0.26
VPS8-227ENST00000625842 HFM1A2PYH4 1435 aa13.45□□□□□ -0.26
VPS8-227ENST00000625842 MYBBP1AQ9BQG0 1328 aaKnown RBP13.45□□□□□ -0.26
VPS8-227ENST00000625842 UBTFL1P0CB47 393 aaPredicted RBP13.45□□□□□ -0.26
VPS8-227ENST00000625842 FYB1O15117 783 aa13.45□□□□□ -0.26
VPS8-227ENST00000625842 SENP3-EIF4A1A0A087X0R7 540 aa13.45□□□□□ -0.26
VPS8-227ENST00000625842 PRAM1Q96QH2 718 aa13.45□□□□□ -0.26
VPS8-227ENST00000625842 SUPT16HQ9Y5B9 1047 aaKnown RBP13.45□□□□□ -0.26
VPS8-227ENST00000625842 REC8O95072 547 aa13.44□□□□□ -0.26
VPS8-227ENST00000625842 ANKRD30BQ9BXX2 1392 aa13.44□□□□□ -0.26
VPS8-227ENST00000625842 RPGRQ92834 1020 aaKnown RBP13.44□□□□□ -0.26
VPS8-227ENST00000625842 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
VPS8-227ENST00000625842 SPDYE4A6NLX3 237 aa13.44□□□□□ -0.26
VPS8-227ENST00000625842 PHF14O94880 888 aa13.44□□□□□ -0.26
VPS8-227ENST00000625842 MYO1BO43795 1136 aa13.43□□□□□ -0.26
VPS8-227ENST00000625842 SLC4A3P48751 1232 aa13.43□□□□□ -0.26
VPS8-227ENST00000625842 DDX19BQ9UMR2 479 aa13.43□□□□□ -0.26
VPS8-227ENST00000625842 SMARCC1Q92922 1105 aaPredicted RBP13.43□□□□□ -0.26
VPS8-227ENST00000625842 HIP1O00291 1037 aa13.43□□□□□ -0.26
VPS8-227ENST00000625842 CCDC57Q2TAC2 916 aa13.43□□□□□ -0.26
VPS8-227ENST00000625842 ATAD2Q6PL18 1390 aa13.42□□□□□ -0.26
VPS8-227ENST00000625842 CLEC11AQ9Y240 323 aa13.42□□□□□ -0.26
VPS8-227ENST00000625842 CCDC146Q8IYE0 955 aa13.42□□□□□ -0.26
VPS8-227ENST00000625842 CLASRPQ8N2M8 674 aaKnown RBP13.42□□□□□ -0.26
VPS8-227ENST00000625842 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
VPS8-227ENST00000625842 PLB1Q6P1J6 1458 aa13.42□□□□□ -0.26
VPS8-227ENST00000625842 DESP17661 470 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 PDE4CQ08493 712 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 CC2D2AQ9P2K1 1620 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 AMOTQ4VCS5 1084 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 ERICH6BQ5W0A0 696 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 CLUAP1Q96AJ1 413 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 CABP2Q9NPB3 220 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 PHF8Q9UPP1 1060 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 SNAPC4Q5SXM2 1469 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 ATP2B2Q01814 1243 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 CCDC61Q9Y6R9 512 aa13.41□□□□□ -0.26
VPS8-227ENST00000625842 ZC3H6P61129 1189 aaKnown RBP13.4□□□□□ -0.26
VPS8-227ENST00000625842 PRDM2Q13029 1718 aa13.4□□□□□ -0.26
VPS8-227ENST00000625842 MIER1Q8N108 512 aa13.4□□□□□ -0.26
VPS8-227ENST00000625842 NECTIN2Q92692 538 aa13.4□□□□□ -0.26
VPS8-227ENST00000625842 NPHP3Q7Z494 1330 aa13.4□□□□□ -0.26
VPS8-227ENST00000625842 CCDC70Q6NSX1 233 aa13.4□□□□□ -0.26
VPS8-227ENST00000625842 TNIP1Q15025 636 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 298.9 ms