RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 ABCC11Q96J66 1382 aa29.18■■■□□ 2.26
R3HCC1-210ENST00000625275 STK26Q9P289 416 aa29.17■■■□□ 2.26
R3HCC1-210ENST00000625275 FMN2Q9NZ56 1722 aa29.17■■■□□ 2.26
R3HCC1-210ENST00000625275 YTHDC2Q9H6S0 1430 aaKnown RBP29.17■■■□□ 2.26
R3HCC1-210ENST00000625275 PNPLA6Q8IY17 1366 aa29.16■■■□□ 2.26
R3HCC1-210ENST00000625275 TMEM132EQ6IEE7 984 aa29.15■■■□□ 2.26
R3HCC1-210ENST00000625275 ORAI2Q96SN7 254 aa29.15■■■□□ 2.26
R3HCC1-210ENST00000625275 DHX57Q6P158 1386 aaKnown RBP29.14■■■□□ 2.26
R3HCC1-210ENST00000625275 NUTM2BA6NNL0 878 aaPredicted RBP29.14■■■□□ 2.26
R3HCC1-210ENST00000625275 NUTM2EB1AL46 878 aaPredicted RBP29.14■■■□□ 2.26
R3HCC1-210ENST00000625275 NUTM2AQ8IVF1 878 aaPredicted RBP29.14■■■□□ 2.26
R3HCC1-210ENST00000625275 RGPD8O14715 1765 aaPredicted RBP29.11■■■□□ 2.25
R3HCC1-210ENST00000625275 ZNF772Q68DY9 489 aaPredicted RBP29.1■■■□□ 2.25
R3HCC1-210ENST00000625275 WAPLQ7Z5K2 1190 aa29.1■■■□□ 2.25
R3HCC1-210ENST00000625275 C14orf93Q9H972 538 aaKnown RBP29.1■■■□□ 2.25
R3HCC1-210ENST00000625275 PLEKHH1Q9ULM0 1364 aa29.1■■■□□ 2.25
R3HCC1-210ENST00000625275 SOS2Q07890 1332 aaPredicted RBP29.1■■■□□ 2.25
R3HCC1-210ENST00000625275 COL22A1Q8NFW1 1626 aaPredicted RBP29.1■■■□□ 2.25
R3HCC1-210ENST00000625275 KIF1AQ12756 1690 aa29.08■■■□□ 2.25
R3HCC1-210ENST00000625275 CFAP70Q5T0N1 1121 aa29.05■■■□□ 2.24
R3HCC1-210ENST00000625275 PXDNQ92626 1479 aa29.04■■■□□ 2.24
R3HCC1-210ENST00000625275 MARF1Q9Y4F3 1742 aaKnown RBP29.04■■■□□ 2.24
R3HCC1-210ENST00000625275 ESCO1Q5FWF5 840 aa29.04■■■□□ 2.24
R3HCC1-210ENST00000625275 DLC1Q96QB1 1528 aa29.03■■■□□ 2.24
R3HCC1-210ENST00000625275 NPHP3Q7Z494 1330 aa29.03■■■□□ 2.24
R3HCC1-210ENST00000625275 SIRT1Q96EB6 747 aa29.03■■■□□ 2.24
R3HCC1-210ENST00000625275 AFF2P51816 1311 aa29.02■■■□□ 2.24
R3HCC1-210ENST00000625275 ADGRB1O14514 1584 aa29.02■■■□□ 2.24
R3HCC1-210ENST00000625275 NUTM2FA1L443 756 aa28.98■■■□□ 2.23
R3HCC1-210ENST00000625275 C8orf37Q96NL8 207 aa28.97■■■□□ 2.23
R3HCC1-210ENST00000625275 ADGRB2O60241 1585 aa28.97■■■□□ 2.23
R3HCC1-210ENST00000625275 CDK12Q9NYV4 1490 aaPredicted RBP28.95■■■□□ 2.23
R3HCC1-210ENST00000625275 FOXO3O43524 673 aa28.94■■■□□ 2.22
R3HCC1-210ENST00000625275 ADAMTS2O95450 1211 aa28.93■■■□□ 2.22
R3HCC1-210ENST00000625275 RXRBP28702 533 aa28.93■■■□□ 2.22
R3HCC1-210ENST00000625275 DCAF11Q8TEB1 546 aa28.92■■■□□ 2.22
R3HCC1-210ENST00000625275 PRAM1Q96QH2 718 aa28.92■■■□□ 2.22
R3HCC1-210ENST00000625275 USP32Q8NFA0 1604 aa28.92■■■□□ 2.22
R3HCC1-210ENST00000625275 ARHGEF28Q8N1W1 1705 aaKnown RBP28.92■■■□□ 2.22
R3HCC1-210ENST00000625275 XPCQ01831 940 aaPredicted RBP28.91■■■□□ 2.22
R3HCC1-210ENST00000625275 KDM2AQ9Y2K7 1162 aa28.91■■■□□ 2.22
R3HCC1-210ENST00000625275 STAC3Q96MF2 364 aa28.9■■■□□ 2.22
R3HCC1-210ENST00000625275 SAFB2Q14151 953 aaKnown RBP eCLIP28.89■■■□□ 2.22
R3HCC1-210ENST00000625275 NGLY1Q96IV0 654 aa28.89■■■□□ 2.22
R3HCC1-210ENST00000625275 KIAA1210Q9ULL0 1709 aa28.87■■■□□ 2.21
R3HCC1-210ENST00000625275 CCER1Q8TC90 406 aaPredicted RBP28.87■■■□□ 2.21
R3HCC1-210ENST00000625275 POGKQ9P215 609 aa28.87■■■□□ 2.21
R3HCC1-210ENST00000625275 ANKARQ7Z5J8 1434 aa28.85■■■□□ 2.21
R3HCC1-210ENST00000625275 ABCA3Q99758 1704 aa28.84■■■□□ 2.21
R3HCC1-210ENST00000625275 QTRT2Q9H974 415 aaKnown RBP28.84■■■□□ 2.21
R3HCC1-210ENST00000625275 TRAK1Q9UPV9 953 aa28.84■■■□□ 2.21
R3HCC1-210ENST00000625275 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.83■■■□□ 2.21
R3HCC1-210ENST00000625275 RGS12O14924 1447 aa28.83■■■□□ 2.2
R3HCC1-210ENST00000625275 RBM6P78332 1123 aaKnown RBP28.82■■■□□ 2.2
R3HCC1-210ENST00000625275 PHF8Q9UPP1 1060 aa28.82■■■□□ 2.2
R3HCC1-210ENST00000625275 SPATA31A3Q5VYP0 1347 aa28.81■■■□□ 2.2
R3HCC1-210ENST00000625275 ITSN1Q15811 1721 aa28.81■■■□□ 2.2
R3HCC1-210ENST00000625275 CLSPNQ9HAW4 1339 aa28.8■■■□□ 2.2
R3HCC1-210ENST00000625275 SIN3AQ96ST3 1273 aa28.8■■■□□ 2.2
R3HCC1-210ENST00000625275 TNS3Q68CZ2 1445 aa28.79■■■□□ 2.2
R3HCC1-210ENST00000625275 USP21Q9UK80 565 aa28.79■■■□□ 2.2
R3HCC1-210ENST00000625275 TULP4Q9NRJ4 1543 aa28.79■■■□□ 2.2
R3HCC1-210ENST00000625275 KRT28Q7Z3Y7 464 aa28.78■■■□□ 2.2
R3HCC1-210ENST00000625275 FNBP4Q8N3X1 1017 aaPredicted RBP28.78■■■□□ 2.2
R3HCC1-210ENST00000625275 TRPM3Q9HCF6 1732 aaPredicted RBP28.78■■■□□ 2.2
R3HCC1-210ENST00000625275 EIF3AQ14152 1382 aaKnown RBP28.78■■■□□ 2.2
R3HCC1-210ENST00000625275 ATRNO75882 1429 aa28.76■■■□□ 2.19
R3HCC1-210ENST00000625275 MINK1Q8N4C8 1332 aaPredicted RBP28.75■■■□□ 2.19
R3HCC1-210ENST00000625275 HIRIP3Q9BW71 556 aaPredicted RBP28.75■■■□□ 2.19
R3HCC1-210ENST00000625275 TRPC5Q9UL62 973 aaPredicted RBP28.74■■■□□ 2.19
R3HCC1-210ENST00000625275 SBNO1A3KN83 1393 aa28.74■■■□□ 2.19
R3HCC1-210ENST00000625275 PSME1Q06323 249 aa28.73■■■□□ 2.19
R3HCC1-210ENST00000625275 UPF1Q92900 1129 aaKnown RBP eCLIP28.73■■■□□ 2.195e-8■■■■■ 31.3
R3HCC1-210ENST00000625275 PLCH1Q4KWH8 1693 aa28.73■■■□□ 2.19
R3HCC1-210ENST00000625275 ALS2Q96Q42 1657 aa28.73■■■□□ 2.19
R3HCC1-210ENST00000625275 NEUROD1Q13562 356 aa28.72■■■□□ 2.19
R3HCC1-210ENST00000625275 BCL9LQ86UU0 1499 aa28.72■■■□□ 2.19
R3HCC1-210ENST00000625275 NWD2Q9ULI1 1742 aa28.71■■■□□ 2.19
R3HCC1-210ENST00000625275 PMFBP1Q8TBY8 1022 aa28.69■■■□□ 2.18
R3HCC1-210ENST00000625275 PRR36Q9H6K5 1346 aa28.69■■■□□ 2.18
R3HCC1-210ENST00000625275 ARHGEF10O15013 1369 aa28.69■■■□□ 2.18
R3HCC1-210ENST00000625275 WASLO00401 505 aaPredicted RBP28.68■■■□□ 2.18
R3HCC1-210ENST00000625275 SLIT2O94813 1529 aa28.68■■■□□ 2.18
R3HCC1-210ENST00000625275 TOPAZ1Q8N9V7 1692 aa28.67■■■□□ 2.18
R3HCC1-210ENST00000625275 ATP7BP35670 1465 aa28.66■■■□□ 2.18
R3HCC1-210ENST00000625275 CRYBG1Q9Y4K1 1723 aa28.66■■■□□ 2.18
R3HCC1-210ENST00000625275 GPRASP1Q5JY77 1395 aa28.63■■■□□ 2.17
R3HCC1-210ENST00000625275 HAP1P54257 671 aaPredicted RBP28.63■■■□□ 2.17
R3HCC1-210ENST00000625275 LMOD2Q6P5Q4 547 aa28.63■■■□□ 2.17
R3HCC1-210ENST00000625275 GLI3P10071 1580 aa28.62■■■□□ 2.17
R3HCC1-210ENST00000625275 CABLES1Q8TDN4 633 aa28.61■■■□□ 2.17
R3HCC1-210ENST00000625275 QRICH2Q9H0J4 1663 aa28.6■■■□□ 2.17
R3HCC1-210ENST00000625275 BRWD3Q6RI45 1802 aa28.59■■■□□ 2.17
R3HCC1-210ENST00000625275 UNC5CLQ8IV45 518 aa28.59■■■□□ 2.17
R3HCC1-210ENST00000625275 NRAPQ86VF7 1730 aa28.58■■■□□ 2.17
R3HCC1-210ENST00000625275 ATAD2Q6PL18 1390 aa28.58■■■□□ 2.17
R3HCC1-210ENST00000625275 PLEKHG5O94827 1062 aa28.58■■■□□ 2.17
R3HCC1-210ENST00000625275 TONSLQ96HA7 1378 aa28.57■■■□□ 2.16
R3HCC1-210ENST00000625275 TRPM1Q7Z4N2 1603 aa28.57■■■□□ 2.16
R3HCC1-210ENST00000625275 NBPF1Q3BBV0 1214 aa28.57■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms