RNA–Protein interactions for RNA: ENST00000624138.3

LINC00963-218, long intergenic non-protein coding RNA 963, humanhuman

TSL 5

Gene LINC00963, Length 261 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-218ENST00000624138 RALGAPBQ86X10 1494 aa11.3□□□□□ -0.6
LINC00963-218ENST00000624138 PXDNQ92626 1479 aa11.3□□□□□ -0.6
LINC00963-218ENST00000624138 SLIT2O94813 1529 aa11.3□□□□□ -0.6
LINC00963-218ENST00000624138 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
LINC00963-218ENST00000624138 PRAG1Q86YV5 1406 aa11.29□□□□□ -0.6
LINC00963-218ENST00000624138 APLP2Q06481 763 aa11.28□□□□□ -0.6
LINC00963-218ENST00000624138 UNC5CLQ8IV45 518 aa11.28□□□□□ -0.6
LINC00963-218ENST00000624138 HRCP23327 699 aa11.27□□□□□ -0.61
LINC00963-218ENST00000624138 SF3B2Q13435 895 aaKnown RBP11.27□□□□□ -0.61
LINC00963-218ENST00000624138 ZNF326Q5BKZ1 582 aaKnown RBP11.27□□□□□ -0.61
LINC00963-218ENST00000624138 NPHP3Q7Z494 1330 aa11.27□□□□□ -0.61
LINC00963-218ENST00000624138 CLTCL1P53675 1640 aa11.27□□□□□ -0.61
LINC00963-218ENST00000624138 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
LINC00963-218ENST00000624138 PLCH1Q4KWH8 1693 aa11.27□□□□□ -0.61
LINC00963-218ENST00000624138 RGPD1P0DJD0 1748 aa11.26□□□□□ -0.61
LINC00963-218ENST00000624138 RGPD8O14715 1765 aaPredicted RBP11.26□□□□□ -0.61
LINC00963-218ENST00000624138 CDC42BPGQ6DT37 1551 aa11.26□□□□□ -0.61
LINC00963-218ENST00000624138 USP32Q8NFA0 1604 aa11.26□□□□□ -0.61
LINC00963-218ENST00000624138 NUP155O75694 1391 aa11.26□□□□□ -0.61
LINC00963-218ENST00000624138 LOC105371045A0A1W2PR82 267 aa11.25□□□□□ -0.61
LINC00963-218ENST00000624138 ONECUT3O60422 494 aaPredicted RBP11.25□□□□□ -0.61
LINC00963-218ENST00000624138 FAM50AQ14320 339 aaKnown RBP11.25□□□□□ -0.61
LINC00963-218ENST00000624138 PPLO60437 1756 aa11.25□□□□□ -0.61
LINC00963-218ENST00000624138 ROCK1Q13464 1354 aa11.25□□□□□ -0.61
LINC00963-218ENST00000624138 HFM1A2PYH4 1435 aa11.25□□□□□ -0.61
LINC00963-218ENST00000624138 ABCA3Q99758 1704 aa11.23□□□□□ -0.61
LINC00963-218ENST00000624138 PSDA5PKW4 1024 aaPredicted RBP11.23□□□□□ -0.61
LINC00963-218ENST00000624138 ESCO1Q5FWF5 840 aa11.23□□□□□ -0.61
LINC00963-218ENST00000624138 SEPT12Q8IYM1 358 aa11.23□□□□□ -0.61
LINC00963-218ENST00000624138 FOXO3O43524 673 aa11.22□□□□□ -0.61
LINC00963-218ENST00000624138 LRPPRCP42704 1394 aaKnown RBP11.22□□□□□ -0.61
LINC00963-218ENST00000624138 KIF1AQ12756 1690 aa11.22□□□□□ -0.61
LINC00963-218ENST00000624138 TNS1Q9HBL0 1735 aaKnown RBP11.21□□□□□ -0.61
LINC00963-218ENST00000624138 FMN2Q9NZ56 1722 aa11.21□□□□□ -0.61
LINC00963-218ENST00000624138 BAG6P46379 1132 aa11.21□□□□□ -0.61
LINC00963-218ENST00000624138 VPS72Q15906 364 aa11.21□□□□□ -0.61
LINC00963-218ENST00000624138 KRT27Q7Z3Y8 459 aa11.21□□□□□ -0.61
LINC00963-218ENST00000624138 NRAPQ86VF7 1730 aa11.21□□□□□ -0.62
LINC00963-218ENST00000624138 SPATA31A3Q5VYP0 1347 aa11.2□□□□□ -0.62
LINC00963-218ENST00000624138 XPCQ01831 940 aaPredicted RBP11.2□□□□□ -0.62
LINC00963-218ENST00000624138 VGFO15240 615 aaPredicted RBP11.19□□□□□ -0.62
LINC00963-218ENST00000624138 KNDC1Q76NI1 1749 aa11.18□□□□□ -0.62
LINC00963-218ENST00000624138 IFT172Q9UG01 1749 aa11.18□□□□□ -0.62
LINC00963-218ENST00000624138 NAIPQ13075 1403 aa11.17□□□□□ -0.62
LINC00963-218ENST00000624138 EN1Q05925 392 aaPredicted RBP11.16□□□□□ -0.62
LINC00963-218ENST00000624138 CCDC144AA2RUR9 1427 aa11.16□□□□□ -0.62
LINC00963-218ENST00000624138 DISP2A7MBM2 1401 aa11.16□□□□□ -0.62
LINC00963-218ENST00000624138 RPGRIP1LQ68CZ1 1315 aa11.15□□□□□ -0.62
LINC00963-218ENST00000624138 YY1P25490 414 aa11.15□□□□□ -0.62
LINC00963-218ENST00000624138 R3HDM1Q15032 1099 aaKnown RBP11.15□□□□□ -0.62
LINC00963-218ENST00000624138 RREB1Q92766 1687 aa11.14□□□□□ -0.63
LINC00963-218ENST00000624138 KRT28Q7Z3Y7 464 aa11.14□□□□□ -0.63
LINC00963-218ENST00000624138 TECPR2O15040 1411 aa11.14□□□□□ -0.63
LINC00963-218ENST00000624138 THSD7AQ9UPZ6 1657 aa11.14□□□□□ -0.63
LINC00963-218ENST00000624138 COL14A1Q05707 1796 aaKnown RBP11.13□□□□□ -0.63
LINC00963-218ENST00000624138 TNS3Q68CZ2 1445 aa11.13□□□□□ -0.63
LINC00963-218ENST00000624138 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
LINC00963-218ENST00000624138 CCDC9Q9Y3X0 531 aaKnown RBP11.13□□□□□ -0.63
LINC00963-218ENST00000624138 NUP188Q5SRE5 1749 aa11.12□□□□□ -0.63
LINC00963-218ENST00000624138 CHD4Q14839 1912 aa11.12□□□□□ -0.63
LINC00963-218ENST00000624138 FAM83GA6ND36 823 aa11.12□□□□□ -0.63
LINC00963-218ENST00000624138 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
LINC00963-218ENST00000624138 WAPLQ7Z5K2 1190 aa11.11□□□□□ -0.63
LINC00963-218ENST00000624138 TRPM3Q9HCF6 1732 aaPredicted RBP11.11□□□□□ -0.63
LINC00963-218ENST00000624138 ALS2Q96Q42 1657 aa11.11□□□□□ -0.63
LINC00963-218ENST00000624138 CRYBG1Q9Y4K1 1723 aa11.1□□□□□ -0.63
LINC00963-218ENST00000624138 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
LINC00963-218ENST00000624138 PSME1Q06323 249 aa11.1□□□□□ -0.63
LINC00963-218ENST00000624138 EZH2Q15910 746 aaKnown RBP11.1□□□□□ -0.63
LINC00963-218ENST00000624138 FAM98CQ17RN3 349 aaKnown RBP11.1□□□□□ -0.63
LINC00963-218ENST00000624138 CAMKK2Q96RR4 588 aa11.1□□□□□ -0.63
LINC00963-218ENST00000624138 SBNO1A3KN83 1393 aa11.1□□□□□ -0.63
LINC00963-218ENST00000624138 ADGRB2O60241 1585 aa11.1□□□□□ -0.63
LINC00963-218ENST00000624138 NRXN1Q9ULB1 1477 aa11.09□□□□□ -0.63
LINC00963-218ENST00000624138 ABCC11Q96J66 1382 aa11.09□□□□□ -0.63
LINC00963-218ENST00000624138 ARHGEF10O15013 1369 aa11.08□□□□□ -0.64
LINC00963-218ENST00000624138 PLEKHH1Q9ULM0 1364 aa11.08□□□□□ -0.64
LINC00963-218ENST00000624138 A0A0G2JS52 829 aa11.08□□□□□ -0.64
LINC00963-218ENST00000624138 MYT1Q01538 1121 aa11.08□□□□□ -0.64
LINC00963-218ENST00000624138 FAM182BQ5T319 152 aa11.08□□□□□ -0.64
LINC00963-218ENST00000624138 PHF8Q9UPP1 1060 aa11.08□□□□□ -0.64
LINC00963-218ENST00000624138 CAMTA1Q9Y6Y1 1673 aa11.08□□□□□ -0.64
LINC00963-218ENST00000624138 PARD3Q8TEW0 1356 aa11.07□□□□□ -0.64
LINC00963-218ENST00000624138 BTG4Q9NY30 223 aa11.07□□□□□ -0.64
LINC00963-218ENST00000624138 SPATA31A5Q5VU36 1347 aa11.07□□□□□ -0.64
LINC00963-218ENST00000624138 SPATA31A7Q8IWB4 1347 aa11.07□□□□□ -0.64
LINC00963-218ENST00000624138 SIRT1Q96EB6 747 aa11.06□□□□□ -0.64
LINC00963-218ENST00000624138 STK26Q9P289 416 aa11.06□□□□□ -0.64
LINC00963-218ENST00000624138 ADGRF5Q8IZF2 1346 aa11.06□□□□□ -0.64
LINC00963-218ENST00000624138 SBF2Q86WG5 1849 aa11.05□□□□□ -0.64
LINC00963-218ENST00000624138 ITGAEP38570 1179 aa11.05□□□□□ -0.64
LINC00963-218ENST00000624138 RRBP1Q9P2E9 1410 aaKnown RBP11.04□□□□□ -0.64
LINC00963-218ENST00000624138 NINLQ9Y2I6 1382 aa11.03□□□□□ -0.64
LINC00963-218ENST00000624138 YTHDC2Q9H6S0 1430 aaKnown RBP11.03□□□□□ -0.64
LINC00963-218ENST00000624138 PLEKHG5O94827 1062 aa11.03□□□□□ -0.64
LINC00963-218ENST00000624138 TRIM37O94972 964 aa11.03□□□□□ -0.64
LINC00963-218ENST00000624138 TMEM132EQ6IEE7 984 aa11.03□□□□□ -0.64
LINC00963-218ENST00000624138 LMOD2Q6P5Q4 547 aa11.03□□□□□ -0.64
LINC00963-218ENST00000624138 FAM196AQ6ZSG2 479 aa11.03□□□□□ -0.64
LINC00963-218ENST00000624138 RGPD3A6NKT7 1758 aaPredicted RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms