RNA–Protein interactions for RNA: ENST00000622483.4

PCSK6-220, Transcript of proprotein convertase subtilisin/kexin type 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCSK6, Length 3,132 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCSK6-220ENST00000622483 ERBINQ96RT1 1412 aa27.51■■□□□ 1.99
PCSK6-220ENST00000622483 CHMP5Q9NZZ3 219 aa27.51■■□□□ 1.99
PCSK6-220ENST00000622483 KANK1Q14678 1352 aa27.5■■□□□ 1.99
PCSK6-220ENST00000622483 RRP7AQ9Y3A4 280 aaKnown RBP27.5■■□□□ 1.99
PCSK6-220ENST00000622483 E9PCH4 1651 aa27.49■■□□□ 1.99
PCSK6-220ENST00000622483 FAM13BQ9NYF5 915 aa27.49■■□□□ 1.99
PCSK6-220ENST00000622483 UGGT1Q9NYU2 1555 aa27.48■■□□□ 1.99
PCSK6-220ENST00000622483 TMF1P82094 1093 aa27.48■■□□□ 1.99
PCSK6-220ENST00000622483 RLBP1P12271 317 aa27.47■■□□□ 1.99
PCSK6-220ENST00000622483 C22orf23Q9BZE7 217 aa27.47■■□□□ 1.99
PCSK6-220ENST00000622483 CENPJQ9HC77 1338 aaPredicted RBP27.46■■□□□ 1.99
PCSK6-220ENST00000622483 MAST1Q9Y2H9 1570 aa27.46■■□□□ 1.99
PCSK6-220ENST00000622483 A2MP01023 1474 aa27.46■■□□□ 1.99
PCSK6-220ENST00000622483 RTEL1-TNFRSF6BF6WH68 1400 aa27.46■■□□□ 1.99
PCSK6-220ENST00000622483 FBXO31Q5XUX0 539 aaPredicted RBP27.46■■□□□ 1.99
PCSK6-220ENST00000622483 CGNL1Q0VF96 1302 aa27.45■■□□□ 1.99
PCSK6-220ENST00000622483 ZBTB7CA1YPR0 619 aa27.45■■□□□ 1.99
PCSK6-220ENST00000622483 PLXNC1O60486 1568 aa27.45■■□□□ 1.98
PCSK6-220ENST00000622483 PDCL3Q9H2J4 239 aa27.43■■□□□ 1.98
PCSK6-220ENST00000622483 KIDINS220Q9ULH0 1771 aa27.42■■□□□ 1.98
PCSK6-220ENST00000622483 NKTRP30414 1462 aaKnown RBP27.42■■□□□ 1.98
PCSK6-220ENST00000622483 ARAP3Q8WWN8 1544 aa27.4■■□□□ 1.98
PCSK6-220ENST00000622483 HSCBQ8IWL3 235 aa27.39■■□□□ 1.98
PCSK6-220ENST00000622483 E9PSI1 815 aa27.38■■□□□ 1.97
PCSK6-220ENST00000622483 TNNT2P45379 298 aaPredicted RBP27.38■■□□□ 1.97
PCSK6-220ENST00000622483 TNPO1Q92973 898 aaKnown RBP27.37■■□□□ 1.97
PCSK6-220ENST00000622483 TRMT2AQ8IZ69 625 aaKnown RBP27.37■■□□□ 1.97
PCSK6-220ENST00000622483 R3HCC1Q9Y3T6 440 aaKnown RBP27.37■■□□□ 1.97
PCSK6-220ENST00000622483 COL17A1Q9UMD9 1497 aaPredicted RBP27.37■■□□□ 1.97
PCSK6-220ENST00000622483 TPM2P07951 284 aa27.36■■□□□ 1.97
PCSK6-220ENST00000622483 INO80Q9ULG1 1556 aaPredicted RBP27.36■■□□□ 1.97
PCSK6-220ENST00000622483 KDM5DQ9BY66 1539 aa27.36■■□□□ 1.97
PCSK6-220ENST00000622483 CFAP70Q5T0N1 1121 aa27.36■■□□□ 1.97
PCSK6-220ENST00000622483 PRDM10Q9NQV6 1147 aa27.36■■□□□ 1.97
PCSK6-220ENST00000622483 DDX11L8A8MPP1 907 aa27.35■■□□□ 1.97
PCSK6-220ENST00000622483 PDE3AQ14432 1141 aa27.35■■□□□ 1.97
PCSK6-220ENST00000622483 AMER1Q5JTC6 1135 aaPredicted RBP27.35■■□□□ 1.97
PCSK6-220ENST00000622483 PRAG1Q86YV5 1406 aa27.34■■□□□ 1.97
PCSK6-220ENST00000622483 ADGRF5Q8IZF2 1346 aa27.33■■□□□ 1.97
PCSK6-220ENST00000622483 ATP10AO60312 1499 aa27.33■■□□□ 1.97
PCSK6-220ENST00000622483 UNC13BO14795 1591 aa27.33■■□□□ 1.97
PCSK6-220ENST00000622483 TMEM132EQ6IEE7 984 aa27.32■■□□□ 1.96
PCSK6-220ENST00000622483 RIPK4P57078 832 aa27.32■■□□□ 1.96
PCSK6-220ENST00000622483 PMFBP1Q8TBY8 1022 aa27.32■■□□□ 1.96
PCSK6-220ENST00000622483 MAGI2Q86UL8 1455 aa27.31■■□□□ 1.96
PCSK6-220ENST00000622483 PRDM4Q9UKN5 801 aa27.3■■□□□ 1.96
PCSK6-220ENST00000622483 DIP2BQ9P265 1576 aa27.29■■□□□ 1.96
PCSK6-220ENST00000622483 SAFB2Q14151 953 aaKnown RBP eCLIP27.29■■□□□ 1.962e-6■□□□□ 9.5
PCSK6-220ENST00000622483 IQGAP3Q86VI3 1631 aa27.29■■□□□ 1.96
PCSK6-220ENST00000622483 HSP90AB1P08238 724 aaKnown RBP27.29■■□□□ 1.96
PCSK6-220ENST00000622483 MSNP26038 577 aaKnown RBP27.29■■□□□ 1.96
PCSK6-220ENST00000622483 ZNF692Q9BU19 519 aaPredicted RBP27.29■■□□□ 1.96
PCSK6-220ENST00000622483 NASPP49321 788 aaPredicted RBP27.28■■□□□ 1.96
PCSK6-220ENST00000622483 NEO1Q92859 1461 aa27.28■■□□□ 1.96
PCSK6-220ENST00000622483 VIRMAQ69YN4 1812 aaKnown RBP27.28■■□□□ 1.96
PCSK6-220ENST00000622483 ZHX1Q9UKY1 873 aaPredicted RBP27.27■■□□□ 1.96
PCSK6-220ENST00000622483 NCLP19338 710 aaKnown RBP27.27■■□□□ 1.96
PCSK6-220ENST00000622483 ABCA6Q8N139 1617 aa27.27■■□□□ 1.96
PCSK6-220ENST00000622483 XPCQ01831 940 aaPredicted RBP27.27■■□□□ 1.96
PCSK6-220ENST00000622483 WWC1Q8IX03 1113 aa27.27■■□□□ 1.96
PCSK6-220ENST00000622483 FRMPD1Q5SYB0 1578 aa27.26■■□□□ 1.95
PCSK6-220ENST00000622483 IDI1Q13907 227 aa27.26■■□□□ 1.95
PCSK6-220ENST00000622483 NPATQ14207 1427 aa27.25■■□□□ 1.95
PCSK6-220ENST00000622483 RWDD1Q9H446 243 aaPredicted RBP27.25■■□□□ 1.95
PCSK6-220ENST00000622483 STAG3Q9UJ98 1225 aa27.25■■□□□ 1.95
PCSK6-220ENST00000622483 MLH3Q9UHC1 1453 aa27.25■■□□□ 1.95
PCSK6-220ENST00000622483 RARSP54136 660 aaKnown RBP27.25■■□□□ 1.95
PCSK6-220ENST00000622483 INSRP06213 1382 aa27.24■■□□□ 1.95
PCSK6-220ENST00000622483 HECW2Q9P2P5 1572 aa27.24■■□□□ 1.95
PCSK6-220ENST00000622483 PRDM15P57071 1507 aaPredicted RBP27.24■■□□□ 1.95
PCSK6-220ENST00000622483 ZSCAN30Q86W11 494 aa27.22■■□□□ 1.95
PCSK6-220ENST00000622483 CEBPAP49715 358 aaPredicted RBP27.21■■□□□ 1.95
PCSK6-220ENST00000622483 TRAK1Q9UPV9 953 aa27.21■■□□□ 1.95
PCSK6-220ENST00000622483 CALD1Q05682 793 aaKnown RBP27.21■■□□□ 1.95
PCSK6-220ENST00000622483 CD2BP2O95400 341 aaKnown RBP27.21■■□□□ 1.95
PCSK6-220ENST00000622483 ESF1Q9H501 851 aaKnown RBP27.21■■□□□ 1.95
PCSK6-220ENST00000622483 STK26Q9P289 416 aa27.21■■□□□ 1.95
PCSK6-220ENST00000622483 ANP32BQ92688 251 aaKnown RBP27.2■■□□□ 1.95
PCSK6-220ENST00000622483 RBM42Q9BTD8 480 aaKnown RBP27.2■■□□□ 1.95
PCSK6-220ENST00000622483 MAP3K4Q9Y6R4 1608 aa27.2■■□□□ 1.94
PCSK6-220ENST00000622483 SSFA2P28290 1259 aa27.19■■□□□ 1.94
PCSK6-220ENST00000622483 GBP4Q96PP9 640 aa27.19■■□□□ 1.94
PCSK6-220ENST00000622483 MROH1Q8NDA8 1641 aa27.18■■□□□ 1.94
PCSK6-220ENST00000622483 FTSJ3Q8IY81 847 aaKnown RBP27.18■■□□□ 1.94
PCSK6-220ENST00000622483 DDX49Q9Y6V7 483 aaKnown RBP27.18■■□□□ 1.94
PCSK6-220ENST00000622483 CEP152O94986 1710 aa27.18■■□□□ 1.94
PCSK6-220ENST00000622483 OFD1O75665 1012 aa27.18■■□□□ 1.94
PCSK6-220ENST00000622483 UQCRHLA0A096LP55 91 aa27.16■■□□□ 1.94
PCSK6-220ENST00000622483 UQCRHP07919 91 aa27.16■■□□□ 1.94
PCSK6-220ENST00000622483 CCDC173Q0VFZ6 552 aa27.15■■□□□ 1.94
PCSK6-220ENST00000622483 CLTCL1P53675 1640 aa27.15■■□□□ 1.94
PCSK6-220ENST00000622483 JARID2Q92833 1246 aaPredicted RBP27.14■■□□□ 1.94
PCSK6-220ENST00000622483 TRPM1Q7Z4N2 1603 aa27.14■■□□□ 1.94
PCSK6-220ENST00000622483 DIP2CQ9Y2E4 1556 aa27.14■■□□□ 1.94
PCSK6-220ENST00000622483 LNPKQ9C0E8 428 aa27.12■■□□□ 1.93
PCSK6-220ENST00000622483 PDZRN4Q6ZMN7 1036 aaPredicted RBP27.12■■□□□ 1.93
PCSK6-220ENST00000622483 PPRC1Q5VV67 1664 aaKnown RBP27.12■■□□□ 1.93
PCSK6-220ENST00000622483 NOS1P29475 1434 aa27.12■■□□□ 1.93
PCSK6-220ENST00000622483 MPNDQ8N594 471 aa27.12■■□□□ 1.93
PCSK6-220ENST00000622483 ITPRIPQ8IWB1 547 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms