RNA–Protein interactions for RNA: ENST00000621813.4

TRA2A-212, Transcript of transformer 2 alpha homolog, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TRA2A, Length 1,931 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-212ENST00000621813 ZBTB47Q9UFB7 747 aaPredicted RBP23.12■■□□□ 1.29
TRA2A-212ENST00000621813 IDI1Q13907 227 aa23.11■■□□□ 1.29
TRA2A-212ENST00000621813 PUS7Q96PZ0 661 aaKnown RBP23.1■■□□□ 1.29
TRA2A-212ENST00000621813 TRAK1Q9UPV9 953 aa23.1■■□□□ 1.29
TRA2A-212ENST00000621813 WDR43Q15061 677 aaKnown RBP eCLIP23.08■■□□□ 1.29
TRA2A-212ENST00000621813 USP32Q8NFA0 1604 aa23.08■■□□□ 1.29
TRA2A-212ENST00000621813 TRHP20396 242 aaPredicted RBP23.08■■□□□ 1.28
TRA2A-212ENST00000621813 TMEM132EQ6IEE7 984 aa23.05■■□□□ 1.28
TRA2A-212ENST00000621813 ADAMTS8Q9UP79 889 aa23.04■■□□□ 1.28
TRA2A-212ENST00000621813 ZMYND15Q9H091 742 aa23.04■■□□□ 1.28
TRA2A-212ENST00000621813 CLTCQ00610 1675 aaKnown RBP23.03■■□□□ 1.28
TRA2A-212ENST00000621813 SENP3-EIF4A1A0A087X0R7 540 aa23.03■■□□□ 1.28
TRA2A-212ENST00000621813 CARD14Q9BXL6 1004 aa23.03■■□□□ 1.28
TRA2A-212ENST00000621813 ARHGEF40Q8TER5 1519 aa23.02■■□□□ 1.28
TRA2A-212ENST00000621813 EVC2Q86UK5 1308 aa23.01■■□□□ 1.27
TRA2A-212ENST00000621813 RCAN3Q9UKA8 241 aa23.01■■□□□ 1.27
TRA2A-212ENST00000621813 SPATA31D1Q6ZQQ2 1576 aa23■■□□□ 1.27
TRA2A-212ENST00000621813 TULP4Q9NRJ4 1543 aa22.99■■□□□ 1.27
TRA2A-212ENST00000621813 B4GALNT3Q6L9W6 998 aa22.98■■□□□ 1.27
TRA2A-212ENST00000621813 NSD3Q9BZ95 1437 aa22.98■■□□□ 1.27
TRA2A-212ENST00000621813 RRP1P56182 461 aaKnown RBP22.98■■□□□ 1.27
TRA2A-212ENST00000621813 FAM43AQ8N2R8 423 aa22.97■■□□□ 1.27
TRA2A-212ENST00000621813 NINLQ9Y2I6 1382 aa22.96■■□□□ 1.27
TRA2A-212ENST00000621813 NUTM2DQ5VT03 806 aaPredicted RBP22.96■■□□□ 1.27
TRA2A-212ENST00000621813 PPM1GO15355 546 aaPredicted RBP22.96■■□□□ 1.27
TRA2A-212ENST00000621813 POLR3AO14802 1390 aaPredicted RBP22.95■■□□□ 1.26
TRA2A-212ENST00000621813 NSD2O96028 1365 aa22.93■■□□□ 1.26
TRA2A-212ENST00000621813 ANKRD36BQ8N2N9 1353 aa22.93■■□□□ 1.26
TRA2A-212ENST00000621813 FBXO31Q5XUX0 539 aaPredicted RBP22.93■■□□□ 1.26
TRA2A-212ENST00000621813 NGEFQ8N5V2 710 aa22.93■■□□□ 1.26
TRA2A-212ENST00000621813 CDCA7LQ96GN5 454 aa22.93■■□□□ 1.26
TRA2A-212ENST00000621813 SLC12A5Q9H2X9 1139 aa22.93■■□□□ 1.26
TRA2A-212ENST00000621813 ALKQ9UM73 1620 aa22.93■■□□□ 1.26
TRA2A-212ENST00000621813 PTPRMP28827 1452 aa22.92■■□□□ 1.26
TRA2A-212ENST00000621813 VSIG10Q8N0Z9 540 aa22.92■■□□□ 1.26
TRA2A-212ENST00000621813 CGNL1Q0VF96 1302 aa22.91■■□□□ 1.26
TRA2A-212ENST00000621813 YTHDC2Q9H6S0 1430 aaKnown RBP22.91■■□□□ 1.26
TRA2A-212ENST00000621813 STAG3Q9UJ98 1225 aa22.9■■□□□ 1.26
TRA2A-212ENST00000621813 ZNF521Q96K83 1311 aa22.9■■□□□ 1.26
TRA2A-212ENST00000621813 NEFMP07197 916 aa22.9■■□□□ 1.26
TRA2A-212ENST00000621813 MORC1Q86VD1 984 aa22.89■■□□□ 1.25
TRA2A-212ENST00000621813 A2ML1A8K2U0 1454 aa22.89■■□□□ 1.25
TRA2A-212ENST00000621813 PLEKHH1Q9ULM0 1364 aa22.88■■□□□ 1.25
TRA2A-212ENST00000621813 ATAD2Q6PL18 1390 aa22.87■■□□□ 1.25
TRA2A-212ENST00000621813 SHPRHQ149N8 1683 aa22.87■■□□□ 1.25
TRA2A-212ENST00000621813 GOLGA2Q08379 1002 aa22.86■■□□□ 1.25
TRA2A-212ENST00000621813 DLC1Q96QB1 1528 aa22.85■■□□□ 1.25
TRA2A-212ENST00000621813 BRPF3Q9ULD4 1205 aa22.84■■□□□ 1.25
TRA2A-212ENST00000621813 SETD1AO15047 1707 aaKnown RBP22.84■■□□□ 1.25
TRA2A-212ENST00000621813 STK26Q9P289 416 aa22.83■■□□□ 1.25
TRA2A-212ENST00000621813 GSE1Q14687 1217 aa22.82■■□□□ 1.24
TRA2A-212ENST00000621813 RIMS2Q9UQ26 1411 aa22.82■■□□□ 1.24
TRA2A-212ENST00000621813 ANKRD26Q9UPS8 1709 aa22.82■■□□□ 1.24
TRA2A-212ENST00000621813 DUSP27Q5VZP5 1158 aa22.81■■□□□ 1.24
TRA2A-212ENST00000621813 CABP2Q9NPB3 220 aa22.81■■□□□ 1.24
TRA2A-212ENST00000621813 POGKQ9P215 609 aa22.81■■□□□ 1.24
TRA2A-212ENST00000621813 PRAM1Q96QH2 718 aa22.8■■□□□ 1.24
TRA2A-212ENST00000621813 ESF1Q9H501 851 aaKnown RBP22.8■■□□□ 1.24
TRA2A-212ENST00000621813 ABCC11Q96J66 1382 aa22.8■■□□□ 1.24
TRA2A-212ENST00000621813 SRPK2P78362 688 aaKnown RBP22.8■■□□□ 1.24
TRA2A-212ENST00000621813 RRP9O43818 475 aaKnown RBP22.79■■□□□ 1.24
TRA2A-212ENST00000621813 CFAP53Q96M91 514 aa22.79■■□□□ 1.24
TRA2A-212ENST00000621813 CCDC146Q8IYE0 955 aa22.78■■□□□ 1.24
TRA2A-212ENST00000621813 APAF1O14727 1248 aa22.78■■□□□ 1.24
TRA2A-212ENST00000621813 SLFN5Q08AF3 891 aa22.78■■□□□ 1.24
TRA2A-212ENST00000621813 SAFB2Q14151 953 aaKnown RBP eCLIP22.78■■□□□ 1.241e-8■■□□□ 12.9
TRA2A-212ENST00000621813 MED14O60244 1454 aa22.78■■□□□ 1.24
TRA2A-212ENST00000621813 A0A1W2PP64 1363 aa22.77■■□□□ 1.24
TRA2A-212ENST00000621813 ZMYM3Q14202 1370 aa22.77■■□□□ 1.24
TRA2A-212ENST00000621813 MLECQ14165 292 aa22.77■■□□□ 1.24
TRA2A-212ENST00000621813 TRMT2AQ8IZ69 625 aaKnown RBP22.77■■□□□ 1.24
TRA2A-212ENST00000621813 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.77■■□□□ 1.24
TRA2A-212ENST00000621813 TERF2IPQ9NYB0 399 aa22.77■■□□□ 1.24
TRA2A-212ENST00000621813 EXOC6Q8TAG9 804 aa22.76■■□□□ 1.23
TRA2A-212ENST00000621813 NRXN3Q9Y4C0 1643 aa22.74■■□□□ 1.23
TRA2A-212ENST00000621813 NKTRP30414 1462 aaKnown RBP22.74■■□□□ 1.23
TRA2A-212ENST00000621813 MINK1Q8N4C8 1332 aaPredicted RBP22.74■■□□□ 1.23
TRA2A-212ENST00000621813 E9PSI1 815 aa22.74■■□□□ 1.23
TRA2A-212ENST00000621813 HDGFP51858 240 aaKnown RBP22.73■■□□□ 1.23
TRA2A-212ENST00000621813 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.73■■□□□ 1.23
TRA2A-212ENST00000621813 KNDC1Q76NI1 1749 aa22.73■■□□□ 1.23
TRA2A-212ENST00000621813 MTHFSP49914 203 aa22.72■■□□□ 1.23
TRA2A-212ENST00000621813 CD163L1Q9NR16 1453 aa22.72■■□□□ 1.23
TRA2A-212ENST00000621813 KIF20BQ96Q89 1820 aa22.72■■□□□ 1.23
TRA2A-212ENST00000621813 TNNT2P45379 298 aaPredicted RBP22.71■■□□□ 1.23
TRA2A-212ENST00000621813 RUNDC1Q96C34 613 aa22.71■■□□□ 1.23
TRA2A-212ENST00000621813 IQSEC2Q5JU85 1478 aa22.71■■□□□ 1.23
TRA2A-212ENST00000621813 NCBP3Q53F19 620 aaKnown RBP22.7■■□□□ 1.23
TRA2A-212ENST00000621813 HDGFL2Q7Z4V5 671 aaPredicted RBP22.7■■□□□ 1.22
TRA2A-212ENST00000621813 TNRQ92752 1358 aa22.69■■□□□ 1.22
TRA2A-212ENST00000621813 UBR1Q8IWV7 1749 aa22.69■■□□□ 1.22
TRA2A-212ENST00000621813 CDK19Q9BWU1 502 aa22.69■■□□□ 1.22
TRA2A-212ENST00000621813 ATP7BP35670 1465 aa22.68■■□□□ 1.22
TRA2A-212ENST00000621813 SENP3Q9H4L4 574 aaPredicted RBP22.67■■□□□ 1.22
TRA2A-212ENST00000621813 PLIN1O60240 522 aa22.67■■□□□ 1.22
TRA2A-212ENST00000621813 NLRP1Q9C000 1473 aa22.66■■□□□ 1.22
TRA2A-212ENST00000621813 HSP90AA2PQ14568 343 aaPredicted RBP22.66■■□□□ 1.22
TRA2A-212ENST00000621813 WWC1Q8IX03 1113 aa22.65■■□□□ 1.22
TRA2A-212ENST00000621813 CCDC27Q2M243 656 aa22.64■■□□□ 1.21
TRA2A-212ENST00000621813 SIRT1Q96EB6 747 aa22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms