RNA–Protein interactions for RNA: ENST00000619336.1

TMCO3-209, Transcript of transmembrane and coiled-coil domains 3, humanhuman

TSL 4

Gene TMCO3, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-209ENST00000619336 VGFO15240 615 aaPredicted RBP22.21■■□□□ 1.15
TMCO3-209ENST00000619336 ZRANB1Q9UGI0 708 aa22.2■■□□□ 1.14
TMCO3-209ENST00000619336 HFM1A2PYH4 1435 aa22.2■■□□□ 1.14
TMCO3-209ENST00000619336 PPLO60437 1756 aa22.19■■□□□ 1.14
TMCO3-209ENST00000619336 BCL9LQ86UU0 1499 aa22.18■■□□□ 1.14
TMCO3-209ENST00000619336 PXDNQ92626 1479 aa22.18■■□□□ 1.14
TMCO3-209ENST00000619336 ESCO1Q5FWF5 840 aa22.18■■□□□ 1.14
TMCO3-209ENST00000619336 CDC42BPGQ6DT37 1551 aa22.17■■□□□ 1.14
TMCO3-209ENST00000619336 NPHP3Q7Z494 1330 aa22.17■■□□□ 1.14
TMCO3-209ENST00000619336 XPCQ01831 940 aaPredicted RBP22.17■■□□□ 1.14
TMCO3-209ENST00000619336 NAIPQ13075 1403 aa22.15■■□□□ 1.14
TMCO3-209ENST00000619336 FOXD1Q16676 465 aa22.15■■□□□ 1.14
TMCO3-209ENST00000619336 RPGRIP1LQ68CZ1 1315 aa22.13■■□□□ 1.13
TMCO3-209ENST00000619336 FOXO3O43524 673 aa22.13■■□□□ 1.13
TMCO3-209ENST00000619336 GJD4Q96KN9 370 aaPredicted RBP22.12■■□□□ 1.13
TMCO3-209ENST00000619336 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.11■■□□□ 1.13
TMCO3-209ENST00000619336 NUTM2FA1L443 756 aa22.11■■□□□ 1.13
TMCO3-209ENST00000619336 CCDC125Q86Z20 511 aa22.11■■□□□ 1.13
TMCO3-209ENST00000619336 GLI3P10071 1580 aa22.09■■□□□ 1.13
TMCO3-209ENST00000619336 STK26Q9P289 416 aa22.07■■□□□ 1.12
TMCO3-209ENST00000619336 RALGAPBQ86X10 1494 aa22.07■■□□□ 1.12
TMCO3-209ENST00000619336 BRWD3Q6RI45 1802 aa22.06■■□□□ 1.12
TMCO3-209ENST00000619336 WAPLQ7Z5K2 1190 aa22.06■■□□□ 1.12
TMCO3-209ENST00000619336 SLC4A1APQ9BWU0 796 aaKnown RBP22.06■■□□□ 1.12
TMCO3-209ENST00000619336 LRPPRCP42704 1394 aaKnown RBP22.06■■□□□ 1.12
TMCO3-209ENST00000619336 RRBP1Q9P2E9 1410 aaKnown RBP22.06■■□□□ 1.12
TMCO3-209ENST00000619336 ADGRF5Q8IZF2 1346 aa22.06■■□□□ 1.12
TMCO3-209ENST00000619336 SLIT2O94813 1529 aa22.05■■□□□ 1.12
TMCO3-209ENST00000619336 FMN2Q9NZ56 1722 aa22.04■■□□□ 1.12
TMCO3-209ENST00000619336 UNC5CLQ8IV45 518 aa22.04■■□□□ 1.12
TMCO3-209ENST00000619336 BLMP54132 1417 aaPredicted RBP22.04■■□□□ 1.12
TMCO3-209ENST00000619336 USP32Q8NFA0 1604 aa22.03■■□□□ 1.12
TMCO3-209ENST00000619336 PLEKHH1Q9ULM0 1364 aa22.03■■□□□ 1.12
TMCO3-209ENST00000619336 TECPR2O15040 1411 aa22.03■■□□□ 1.12
TMCO3-209ENST00000619336 KIF1AQ12756 1690 aa22.02■■□□□ 1.12
TMCO3-209ENST00000619336 KNDC1Q76NI1 1749 aa22.02■■□□□ 1.12
TMCO3-209ENST00000619336 SPATA31A3Q5VYP0 1347 aa22.02■■□□□ 1.12
TMCO3-209ENST00000619336 IFT172Q9UG01 1749 aa22■■□□□ 1.11
TMCO3-209ENST00000619336 DEFB132Q7Z7B7 95 aa22■■□□□ 1.11
TMCO3-209ENST00000619336 TMEM132EQ6IEE7 984 aa21.99■■□□□ 1.11
TMCO3-209ENST00000619336 CCDC144AA2RUR9 1427 aa21.98■■□□□ 1.11
TMCO3-209ENST00000619336 RGPD8O14715 1765 aaPredicted RBP21.98■■□□□ 1.11
TMCO3-209ENST00000619336 RGL3Q3MIN7 710 aa21.98■■□□□ 1.11
TMCO3-209ENST00000619336 PLEKHG5O94827 1062 aa21.97■■□□□ 1.11
TMCO3-209ENST00000619336 KRT28Q7Z3Y7 464 aa21.97■■□□□ 1.11
TMCO3-209ENST00000619336 PLCH1Q4KWH8 1693 aa21.97■■□□□ 1.11
TMCO3-209ENST00000619336 ABCC11Q96J66 1382 aa21.97■■□□□ 1.11
TMCO3-209ENST00000619336 SEPT12Q8IYM1 358 aa21.96■■□□□ 1.11
TMCO3-209ENST00000619336 HAP1P54257 671 aaPredicted RBP21.95■■□□□ 1.1
TMCO3-209ENST00000619336 CABLES1Q8TDN4 633 aa21.95■■□□□ 1.1
TMCO3-209ENST00000619336 SPATA31E1Q6ZUB1 1445 aa21.95■■□□□ 1.1
TMCO3-209ENST00000619336 SF3B2Q13435 895 aaKnown RBP21.94■■□□□ 1.1
TMCO3-209ENST00000619336 TNS3Q68CZ2 1445 aa21.94■■□□□ 1.1
TMCO3-209ENST00000619336 ABCA3Q99758 1704 aa21.94■■□□□ 1.1
TMCO3-209ENST00000619336 PIK3C2GO75747 1445 aa21.93■■□□□ 1.1
TMCO3-209ENST00000619336 ANKRD30BQ9BXX2 1392 aa21.93■■□□□ 1.1
TMCO3-209ENST00000619336 YTHDC2Q9H6S0 1430 aaKnown RBP21.93■■□□□ 1.1
TMCO3-209ENST00000619336 NWD2Q9ULI1 1742 aa21.93■■□□□ 1.1
TMCO3-209ENST00000619336 VPS72Q15906 364 aa21.92■■□□□ 1.1
TMCO3-209ENST00000619336 CCDC9Q9Y3X0 531 aaKnown RBP21.92■■□□□ 1.1
TMCO3-209ENST00000619336 LRP5O75197 1615 aa21.91■■□□□ 1.1
TMCO3-209ENST00000619336 PHF8Q9UPP1 1060 aa21.9■■□□□ 1.1
TMCO3-209ENST00000619336 LMOD2Q6P5Q4 547 aa21.88■■□□□ 1.09
TMCO3-209ENST00000619336 KRT27Q7Z3Y8 459 aa21.88■■□□□ 1.09
TMCO3-209ENST00000619336 PSME1Q06323 249 aa21.87■■□□□ 1.09
TMCO3-209ENST00000619336 NRXN1Q9ULB1 1477 aa21.86■■□□□ 1.09
TMCO3-209ENST00000619336 ONECUT3O60422 494 aaPredicted RBP21.86■■□□□ 1.09
TMCO3-209ENST00000619336 SBNO1A3KN83 1393 aa21.86■■□□□ 1.09
TMCO3-209ENST00000619336 A0A0G2JS52 829 aa21.85■■□□□ 1.09
TMCO3-209ENST00000619336 PSDA5PKW4 1024 aaPredicted RBP21.85■■□□□ 1.09
TMCO3-209ENST00000619336 MYT1Q01538 1121 aa21.85■■□□□ 1.09
TMCO3-209ENST00000619336 NRAPQ86VF7 1730 aa21.84■■□□□ 1.09
TMCO3-209ENST00000619336 SAFB2Q14151 953 aaKnown RBP eCLIP21.84■■□□□ 1.09
TMCO3-209ENST00000619336 ARHGEF10O15013 1369 aa21.84■■□□□ 1.09
TMCO3-209ENST00000619336 FAM83GA6ND36 823 aa21.83■■□□□ 1.09
TMCO3-209ENST00000619336 SIRT1Q96EB6 747 aa21.83■■□□□ 1.09
TMCO3-209ENST00000619336 MPHOSPH9Q99550 1183 aa21.82■■□□□ 1.08
TMCO3-209ENST00000619336 BAG6P46379 1132 aa21.81■■□□□ 1.08
TMCO3-209ENST00000619336 FAM98CQ17RN3 349 aaKnown RBP21.81■■□□□ 1.08
TMCO3-209ENST00000619336 C14orf93Q9H972 538 aaKnown RBP21.81■■□□□ 1.08
TMCO3-209ENST00000619336 PMFBP1Q8TBY8 1022 aa21.8■■□□□ 1.08
TMCO3-209ENST00000619336 PRAM1Q96QH2 718 aa21.8■■□□□ 1.08
TMCO3-209ENST00000619336 DHX57Q6P158 1386 aaKnown RBP21.79■■□□□ 1.08
TMCO3-209ENST00000619336 CFAP70Q5T0N1 1121 aa21.79■■□□□ 1.08
TMCO3-209ENST00000619336 TRPM3Q9HCF6 1732 aaPredicted RBP21.79■■□□□ 1.08
TMCO3-209ENST00000619336 HRCP23327 699 aa21.78■■□□□ 1.08
TMCO3-209ENST00000619336 BTG4Q9NY30 223 aa21.77■■□□□ 1.08
TMCO3-209ENST00000619336 RGPD1P0DJD0 1748 aa21.77■■□□□ 1.08
TMCO3-209ENST00000619336 COL14A1Q05707 1796 aaKnown RBP21.76■■□□□ 1.07
TMCO3-209ENST00000619336 ANKARQ7Z5J8 1434 aa21.76■■□□□ 1.07
TMCO3-209ENST00000619336 ALS2Q96Q42 1657 aa21.75■■□□□ 1.07
TMCO3-209ENST00000619336 EN1Q05925 392 aaPredicted RBP21.75■■□□□ 1.07
TMCO3-209ENST00000619336 FAM182BQ5T319 152 aa21.75■■□□□ 1.07
TMCO3-209ENST00000619336 ADGRB2O60241 1585 aa21.74■■□□□ 1.07
TMCO3-209ENST00000619336 POGKQ9P215 609 aa21.74■■□□□ 1.07
TMCO3-209ENST00000619336 DLC1Q96QB1 1528 aa21.73■■□□□ 1.07
TMCO3-209ENST00000619336 TNS1Q9HBL0 1735 aaKnown RBP21.72■■□□□ 1.07
TMCO3-209ENST00000619336 HIRIP3Q9BW71 556 aaPredicted RBP21.71■■□□□ 1.07
TMCO3-209ENST00000619336 CRYBG1Q9Y4K1 1723 aa21.71■■□□□ 1.07
TMCO3-209ENST00000619336 THSD7AQ9UPZ6 1657 aa21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms