RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 SIRT1Q96EB6 747 aa17.21■□□□□ 0.35
TNFAIP3-209ENST00000619035 CEP170BQ9Y4F5 1589 aaPredicted RBP17.21■□□□□ 0.35
TNFAIP3-209ENST00000619035 LTKP29376 864 aa17.21■□□□□ 0.34
TNFAIP3-209ENST00000619035 CABP2Q9NPB3 220 aa17.21■□□□□ 0.34
TNFAIP3-209ENST00000619035 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
TNFAIP3-209ENST00000619035 TXNDC2Q86VQ3 553 aa17.2■□□□□ 0.34
TNFAIP3-209ENST00000619035 KNDC1Q76NI1 1749 aa17.2■□□□□ 0.34
TNFAIP3-209ENST00000619035 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
TNFAIP3-209ENST00000619035 SLC12A5Q9H2X9 1139 aa17.19■□□□□ 0.34
TNFAIP3-209ENST00000619035 BRD4O60885 1362 aaPredicted RBP17.19■□□□□ 0.34
TNFAIP3-209ENST00000619035 AMER1Q5JTC6 1135 aaPredicted RBP17.19■□□□□ 0.34
TNFAIP3-209ENST00000619035 TECPR2O15040 1411 aa17.18■□□□□ 0.34
TNFAIP3-209ENST00000619035 WAPLQ7Z5K2 1190 aa17.18■□□□□ 0.34
TNFAIP3-209ENST00000619035 NLRP13Q86W25 1043 aa17.18■□□□□ 0.34
TNFAIP3-209ENST00000619035 MED14O60244 1454 aa17.17■□□□□ 0.34
TNFAIP3-209ENST00000619035 CARD14Q9BXL6 1004 aa17.17■□□□□ 0.34
TNFAIP3-209ENST00000619035 NPC1L1Q9UHC9 1359 aa17.17■□□□□ 0.34
TNFAIP3-209ENST00000619035 ADAMTS13Q76LX8 1427 aa17.17■□□□□ 0.34
TNFAIP3-209ENST00000619035 NINLQ9Y2I6 1382 aa17.17■□□□□ 0.34
TNFAIP3-209ENST00000619035 FAM135BQ49AJ0 1406 aa17.16■□□□□ 0.34
TNFAIP3-209ENST00000619035 DIP2AQ14689 1571 aa17.16■□□□□ 0.34
TNFAIP3-209ENST00000619035 PLEKHH1Q9ULM0 1364 aa17.16■□□□□ 0.34
TNFAIP3-209ENST00000619035 SENP3-EIF4A1A0A087X0R7 540 aa17.15■□□□□ 0.34
TNFAIP3-209ENST00000619035 PNISRQ8TF01 805 aaKnown RBP17.15■□□□□ 0.34
TNFAIP3-209ENST00000619035 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
TNFAIP3-209ENST00000619035 CPS1P31327 1500 aa17.14■□□□□ 0.33
TNFAIP3-209ENST00000619035 NSD3Q9BZ95 1437 aa17.14■□□□□ 0.33
TNFAIP3-209ENST00000619035 FKBP8Q14318 412 aa17.13■□□□□ 0.33
TNFAIP3-209ENST00000619035 TBX22Q9Y458 520 aa17.13■□□□□ 0.33
TNFAIP3-209ENST00000619035 ATAD2Q6PL18 1390 aa17.12■□□□□ 0.33
TNFAIP3-209ENST00000619035 CDK19Q9BWU1 502 aa17.12■□□□□ 0.33
TNFAIP3-209ENST00000619035 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
TNFAIP3-209ENST00000619035 ANKRD36BQ8N2N9 1353 aa17.09■□□□□ 0.33
TNFAIP3-209ENST00000619035 PIK3R4Q99570 1358 aa17.09■□□□□ 0.33
TNFAIP3-209ENST00000619035 ANKLE2Q86XL3 938 aa17.08■□□□□ 0.32
TNFAIP3-209ENST00000619035 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
TNFAIP3-209ENST00000619035 ROBO2Q9HCK4 1378 aa17.07■□□□□ 0.32
TNFAIP3-209ENST00000619035 A0A1W2PP64 1363 aa17.07■□□□□ 0.32
TNFAIP3-209ENST00000619035 CGNL1Q0VF96 1302 aa17.06■□□□□ 0.32
TNFAIP3-209ENST00000619035 ZBED9Q6R2W3 1325 aa17.06■□□□□ 0.32
TNFAIP3-209ENST00000619035 PTCH1Q13635 1447 aa17.05■□□□□ 0.32
TNFAIP3-209ENST00000619035 TNNT2P45379 298 aaPredicted RBP17.05■□□□□ 0.32
TNFAIP3-209ENST00000619035 MORC1Q86VD1 984 aa17.05■□□□□ 0.32
TNFAIP3-209ENST00000619035 CABP1Q9NZU7 370 aa17.05■□□□□ 0.32
TNFAIP3-209ENST00000619035 PTPRUQ92729 1446 aa17.04■□□□□ 0.32
TNFAIP3-209ENST00000619035 TERF2IPQ9NYB0 399 aa17.04■□□□□ 0.32
TNFAIP3-209ENST00000619035 WASLO00401 505 aaPredicted RBP17.04■□□□□ 0.32
TNFAIP3-209ENST00000619035 ADGRB2O60241 1585 aa17.04■□□□□ 0.32
TNFAIP3-209ENST00000619035 AMOTL2Q9Y2J4 779 aa17.03■□□□□ 0.32
TNFAIP3-209ENST00000619035 NEFLP07196 543 aa17.02■□□□□ 0.32
TNFAIP3-209ENST00000619035 IRX6P78412 446 aaPredicted RBP17.02■□□□□ 0.32
TNFAIP3-209ENST00000619035 HDGFL2Q7Z4V5 671 aaPredicted RBP17.02■□□□□ 0.32
TNFAIP3-209ENST00000619035 NSD2O96028 1365 aa17.01■□□□□ 0.31
TNFAIP3-209ENST00000619035 CD163L1Q9NR16 1453 aa17.01■□□□□ 0.31
TNFAIP3-209ENST00000619035 XRN1Q8IZH2 1706 aaKnown RBP17.01■□□□□ 0.31
TNFAIP3-209ENST00000619035 WDR43Q15061 677 aaKnown RBP eCLIP17■□□□□ 0.31
TNFAIP3-209ENST00000619035 ATP7BP35670 1465 aa16.99■□□□□ 0.31
TNFAIP3-209ENST00000619035 INSRP06213 1382 aa16.99■□□□□ 0.31
TNFAIP3-209ENST00000619035 PPIP5K1Q6PFW1 1433 aa16.98■□□□□ 0.31
TNFAIP3-209ENST00000619035 NCKAP5LQ9HCH0 1330 aa16.98■□□□□ 0.31
TNFAIP3-209ENST00000619035 NUDT16Q96DE0 195 aaKnown RBP16.98■□□□□ 0.31
TNFAIP3-209ENST00000619035 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
TNFAIP3-209ENST00000619035 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
TNFAIP3-209ENST00000619035 NUTM2FA1L443 756 aa16.97■□□□□ 0.31
TNFAIP3-209ENST00000619035 GGNBP2Q9H3C7 697 aa16.97■□□□□ 0.31
TNFAIP3-209ENST00000619035 ADAMTS8Q9UP79 889 aa16.97■□□□□ 0.31
TNFAIP3-209ENST00000619035 CHD2O14647 1828 aaKnown RBP16.97■□□□□ 0.31
TNFAIP3-209ENST00000619035 NPHP4O75161 1426 aaPredicted RBP16.96■□□□□ 0.31
TNFAIP3-209ENST00000619035 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.95■□□□□ 0.3
TNFAIP3-209ENST00000619035 KCNA6P17658 529 aa16.95■□□□□ 0.3
TNFAIP3-209ENST00000619035 CCDC61Q9Y6R9 512 aa16.95■□□□□ 0.3
TNFAIP3-209ENST00000619035 PRR36Q9H6K5 1346 aa16.94■□□□□ 0.3
TNFAIP3-209ENST00000619035 FYB1O15117 783 aa16.94■□□□□ 0.3
TNFAIP3-209ENST00000619035 BLMP54132 1417 aaPredicted RBP16.93■□□□□ 0.3
TNFAIP3-209ENST00000619035 MTHFSP49914 203 aa16.91■□□□□ 0.3
TNFAIP3-209ENST00000619035 CPSF1Q10570 1443 aaKnown RBP16.91■□□□□ 0.3
TNFAIP3-209ENST00000619035 ANKRD26Q9UPS8 1709 aa16.91■□□□□ 0.3
TNFAIP3-209ENST00000619035 POLR3AO14802 1390 aaPredicted RBP16.91■□□□□ 0.3
TNFAIP3-209ENST00000619035 CDC42BPGQ6DT37 1551 aa16.9■□□□□ 0.3
TNFAIP3-209ENST00000619035 ZNF692Q9BU19 519 aaPredicted RBP16.9■□□□□ 0.3
TNFAIP3-209ENST00000619035 TOPAZ1Q8N9V7 1692 aa16.9■□□□□ 0.3
TNFAIP3-209ENST00000619035 KIF20BQ96Q89 1820 aa16.89■□□□□ 0.29
TNFAIP3-209ENST00000619035 EDC4Q6P2E9 1401 aaKnown RBP16.88■□□□□ 0.29
TNFAIP3-209ENST00000619035 CCDC146Q8IYE0 955 aa16.88■□□□□ 0.29
TNFAIP3-209ENST00000619035 CFAP53Q96M91 514 aa16.88■□□□□ 0.29
TNFAIP3-209ENST00000619035 AKAP12Q02952 1782 aa16.88■□□□□ 0.29
TNFAIP3-209ENST00000619035 ITSN1Q15811 1721 aa16.88■□□□□ 0.29
TNFAIP3-209ENST00000619035 PLEKHG3A1L390 1219 aa16.87■□□□□ 0.29
TNFAIP3-209ENST00000619035 MON2Q7Z3U7 1717 aa16.87■□□□□ 0.29
TNFAIP3-209ENST00000619035 RBM33Q96EV2 1170 aaKnown RBP16.87■□□□□ 0.29
TNFAIP3-209ENST00000619035 ANKARQ7Z5J8 1434 aa16.87■□□□□ 0.29
TNFAIP3-209ENST00000619035 NWD1Q149M9 1564 aa16.87■□□□□ 0.29
TNFAIP3-209ENST00000619035 SMG6Q86US8 1419 aaKnown RBP16.86■□□□□ 0.29
TNFAIP3-209ENST00000619035 NME9Q86XW9 330 aa16.86■□□□□ 0.29
TNFAIP3-209ENST00000619035 NUDCQ9Y266 331 aa16.86■□□□□ 0.29
TNFAIP3-209ENST00000619035 ACEP12821 1306 aa16.85■□□□□ 0.29
TNFAIP3-209ENST00000619035 KDM4FA0A1W2PPD8 638 aa16.85■□□□□ 0.29
TNFAIP3-209ENST00000619035 NKTRP30414 1462 aaKnown RBP16.84■□□□□ 0.29
TNFAIP3-209ENST00000619035 PMFBP1Q8TBY8 1022 aa16.84■□□□□ 0.29
TNFAIP3-209ENST00000619035 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms