RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 BRD4O60885 1362 aaPredicted RBP15.18■□□□□ 0.02
MATR3-227ENST00000618441 SYNJ2O15056 1496 aa15.18■□□□□ 0.02
MATR3-227ENST00000618441 SOX12O15370 315 aa15.18■□□□□ 0.02
MATR3-227ENST00000618441 CHMP4CQ96CF2 233 aa15.18■□□□□ 0.02
MATR3-227ENST00000618441 RBM27Q9P2N5 1060 aaKnown RBP15.18■□□□□ 0.02
MATR3-227ENST00000618441 MYOM3Q5VTT5 1437 aa15.17■□□□□ 0.02
MATR3-227ENST00000618441 EFCAB5A4FU69 1503 aa15.17■□□□□ 0.02
MATR3-227ENST00000618441 ZKSCAN5Q9Y2L8 839 aa15.16■□□□□ 0.02
MATR3-227ENST00000618441 ADAMTS12P58397 1594 aa15.16■□□□□ 0.02
MATR3-227ENST00000618441 RBM25P49756 843 aaKnown RBP15.16■□□□□ 0.02
MATR3-227ENST00000618441 NOL7Q9UMY1 257 aaKnown RBP15.16■□□□□ 0.02
MATR3-227ENST00000618441 CYB5RLQ6IPT4 315 aa15.15■□□□□ 0.02
MATR3-227ENST00000618441 FAM43BQ6ZT52 329 aaPredicted RBP15.15■□□□□ 0.02
MATR3-227ENST00000618441 RBSNQ9H1K0 784 aa15.15■□□□□ 0.02
MATR3-227ENST00000618441 CLSTN1O94985 981 aa15.15■□□□□ 0.02
MATR3-227ENST00000618441 KIF3AQ9Y496 699 aa15.15■□□□□ 0.02
MATR3-227ENST00000618441 TRIM6-TRIM34B2RNG4 842 aa15.14■□□□□ 0.01
MATR3-227ENST00000618441 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
MATR3-227ENST00000618441 TRIM34Q9BYJ4 488 aa15.14■□□□□ 0.01
MATR3-227ENST00000618441 THOC2Q8NI27 1593 aaKnown RBP15.14■□□□□ 0.01
MATR3-227ENST00000618441 PPP1R9BQ96SB3 815 aa15.14■□□□□ 0.01
MATR3-227ENST00000618441 TERF1P54274 439 aa15.14■□□□□ 0.01
MATR3-227ENST00000618441 PBRM1Q86U86 1689 aa15.14■□□□□ 0.01
MATR3-227ENST00000618441 PRIM1P49642 420 aaKnown RBP15.14■□□□□ 0.01
MATR3-227ENST00000618441 PRPF40AO75400 957 aaKnown RBP15.13■□□□□ 0.01
MATR3-227ENST00000618441 CCDC39Q9UFE4 941 aa15.13■□□□□ 0.01
MATR3-227ENST00000618441 CHAF1AQ13111 956 aaPredicted RBP15.13■□□□□ 0.01
MATR3-227ENST00000618441 CTTNBP2Q8WZ74 1663 aa15.13■□□□□ 0.01
MATR3-227ENST00000618441 DUSP27Q5VZP5 1158 aa15.12■□□□□ 0.01
MATR3-227ENST00000618441 SYCE3A1L190 88 aa15.12■□□□□ 0.01
MATR3-227ENST00000618441 APAF1O14727 1248 aa15.12■□□□□ 0.01
MATR3-227ENST00000618441 PKD2Q13563 968 aa15.12■□□□□ 0.01
MATR3-227ENST00000618441 MAGI3Q5TCQ9 1506 aa15.1■□□□□ 0.01
MATR3-227ENST00000618441 TEX2Q8IWB9 1127 aa15.1■□□□□ 0.01
MATR3-227ENST00000618441 DISP1Q96F81 1524 aa15.1■□□□□ 0.01
MATR3-227ENST00000618441 IRX5P78411 483 aaPredicted RBP15.09■□□□□ 0.01
MATR3-227ENST00000618441 MAGI1Q96QZ7 1491 aaPredicted RBP15.09■□□□□ 0.01
MATR3-227ENST00000618441 TMX1Q9H3N1 280 aa15.09■□□□□ 0.01
MATR3-227ENST00000618441 ZNF500O60304 480 aaPredicted RBP15.08■□□□□ 0.01
MATR3-227ENST00000618441 PMFBP1Q8TBY8 1022 aa15.08■□□□□ 0.01
MATR3-227ENST00000618441 TNNQ9UQP3 1299 aa15.08■□□□□ 0.01
MATR3-227ENST00000618441 LRPPRCP42704 1394 aaKnown RBP15.08■□□□□ 0.01
MATR3-227ENST00000618441 ZSCAN23Q3MJ62 389 aa15.08■□□□□ 0
MATR3-227ENST00000618441 TAF3Q5VWG9 929 aa15.08■□□□□ 0
MATR3-227ENST00000618441 CHAMP1Q96JM3 812 aa15.08■□□□□ 0
MATR3-227ENST00000618441 RBM42Q9BTD8 480 aaKnown RBP15.08■□□□□ 0
MATR3-227ENST00000618441 RWDD1Q9H446 243 aaPredicted RBP15.08■□□□□ 0
MATR3-227ENST00000618441 TTC12Q9H892 705 aaPredicted RBP15.08■□□□□ 0
MATR3-227ENST00000618441 KCNG1Q9UIX4 513 aa15.08■□□□□ 0
MATR3-227ENST00000618441 NUP153P49790 1475 aaKnown RBP15.08■□□□□ 0
MATR3-227ENST00000618441 CGNL1Q0VF96 1302 aa15.07■□□□□ 0
MATR3-227ENST00000618441 OSCARQ8IYS5 282 aa15.07■□□□□ 0
MATR3-227ENST00000618441 CHGAP10645 457 aaKnown RBP15.07■□□□□ 0
MATR3-227ENST00000618441 AFAP1Q8N556 730 aa15.07■□□□□ 0
MATR3-227ENST00000618441 MYRIPQ8NFW9 859 aa15.07■□□□□ 0
MATR3-227ENST00000618441 NAIPQ13075 1403 aa15.07■□□□□ 0
MATR3-227ENST00000618441 RRP7AQ9Y3A4 280 aaKnown RBP15.07■□□□□ 0
MATR3-227ENST00000618441 BCL2L12Q9HB09 334 aa15.06■□□□□ 0
MATR3-227ENST00000618441 CEP170Q5SW79 1584 aa15.06■□□□□ 0
MATR3-227ENST00000618441 PCDHB15Q9Y5E8 787 aa15.06■□□□□ 0
MATR3-227ENST00000618441 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.06■□□□□ 03e-9■■■□□ 15.1
MATR3-227ENST00000618441 HMGN5P82970 282 aaKnown RBP15.06■□□□□ 0
MATR3-227ENST00000618441 NBPF1Q3BBV0 1214 aa15.06■□□□□ 0
MATR3-227ENST00000618441 ZNF710Q8N1W2 664 aa15.06■□□□□ 0
MATR3-227ENST00000618441 BAG4O95429 457 aaKnown RBP15.05■□□□□ 0
MATR3-227ENST00000618441 SPINK5Q9NQ38 1064 aaPredicted RBP15.05■□□□□ 0
MATR3-227ENST00000618441 ARHGEF11O15085 1522 aa15.05■□□□□ -0
MATR3-227ENST00000618441 CCDC66A2RUB6 948 aa15.05■□□□□ -0
MATR3-227ENST00000618441 NPHP1O15259 732 aa15.04■□□□□ -0
MATR3-227ENST00000618441 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.04■□□□□ -0
MATR3-227ENST00000618441 HFM1A2PYH4 1435 aa15.04■□□□□ -0
MATR3-227ENST00000618441 NUP155O75694 1391 aa15.04■□□□□ -0
MATR3-227ENST00000618441 KLHL40Q2TBA0 621 aa15.03■□□□□ -0
MATR3-227ENST00000618441 TIGD1Q96MW7 591 aa15.03■□□□□ -0
MATR3-227ENST00000618441 RAB3GAP1Q15042 981 aa15.02■□□□□ -0
MATR3-227ENST00000618441 DNAJC2Q99543 621 aaKnown RBP15.02■□□□□ -0
MATR3-227ENST00000618441 TRHP20396 242 aaPredicted RBP15.02■□□□□ -0
MATR3-227ENST00000618441 NOL8Q76FK4 1167 aaKnown RBP15.02■□□□□ -0
MATR3-227ENST00000618441 NOLC1Q14978 699 aaKnown RBP eCLIP15.02□□□□□ -0.01
MATR3-227ENST00000618441 LNPKQ9C0E8 428 aa15.02□□□□□ -0.01
MATR3-227ENST00000618441 RAD21O60216 631 aa15.01□□□□□ -0.01
MATR3-227ENST00000618441 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
MATR3-227ENST00000618441 SPC24Q8NBT2 197 aa15.01□□□□□ -0.01
MATR3-227ENST00000618441 KNSTRNQ9Y448 316 aa15□□□□□ -0.01
MATR3-227ENST00000618441 KDM4AO75164 1064 aa15□□□□□ -0.01
MATR3-227ENST00000618441 GAS2L2Q8NHY3 880 aa15□□□□□ -0.01
MATR3-227ENST00000618441 PLEKHH1Q9ULM0 1364 aa15□□□□□ -0.01
MATR3-227ENST00000618441 TROQ12816 1431 aaPredicted RBP15□□□□□ -0.01
MATR3-227ENST00000618441 USP25Q9UHP3 1055 aa15□□□□□ -0.01
MATR3-227ENST00000618441 HECW1Q76N89 1606 aa14.99□□□□□ -0.01
MATR3-227ENST00000618441 SLFN5Q08AF3 891 aa14.99□□□□□ -0.01
MATR3-227ENST00000618441 U2SURPO15042 1029 aaKnown RBP14.99□□□□□ -0.01
MATR3-227ENST00000618441 KIAA0556O60303 1618 aa14.98□□□□□ -0.01
MATR3-227ENST00000618441 PRDM16Q9HAZ2 1276 aa14.98□□□□□ -0.01
MATR3-227ENST00000618441 EHBP1L1Q8N3D4 1523 aa14.98□□□□□ -0.01
MATR3-227ENST00000618441 CD2BP2O95400 341 aaKnown RBP14.98□□□□□ -0.01
MATR3-227ENST00000618441 HS1BP3Q53T59 392 aa14.98□□□□□ -0.01
MATR3-227ENST00000618441 SAMD9Q5K651 1589 aa14.98□□□□□ -0.01
MATR3-227ENST00000618441 ATP10BO94823 1461 aa14.98□□□□□ -0.01
MATR3-227ENST00000618441 ITPRIPQ8IWB1 547 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms