RNA–Protein interactions for RNA: ENST00000616074.4

TRAPPC3-208, Transcript of trafficking protein particle complex 3, humanhuman

TSL 5 BASIC

Gene TRAPPC3, Length 1,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-208ENST00000616074 TECPR2O15040 1411 aa30.95■■■□□ 2.54
TRAPPC3-208ENST00000616074 PIK3C2GO75747 1445 aa30.95■■■□□ 2.54
TRAPPC3-208ENST00000616074 STK26Q9P289 416 aa30.93■■■□□ 2.54
TRAPPC3-208ENST00000616074 LRPPRCP42704 1394 aaKnown RBP30.92■■■□□ 2.54
TRAPPC3-208ENST00000616074 CDK12Q9NYV4 1490 aaPredicted RBP30.92■■■□□ 2.54
TRAPPC3-208ENST00000616074 TMEM132EQ6IEE7 984 aa30.9■■■□□ 2.54
TRAPPC3-208ENST00000616074 WAPLQ7Z5K2 1190 aa30.9■■■□□ 2.54
TRAPPC3-208ENST00000616074 COL22A1Q8NFW1 1626 aaPredicted RBP30.89■■■□□ 2.54
TRAPPC3-208ENST00000616074 ADAMTS2O95450 1211 aa30.88■■■□□ 2.53
TRAPPC3-208ENST00000616074 ESCO1Q5FWF5 840 aa30.88■■■□□ 2.53
TRAPPC3-208ENST00000616074 ABCC11Q96J66 1382 aa30.88■■■□□ 2.53
TRAPPC3-208ENST00000616074 PLEKHH1Q9ULM0 1364 aa30.88■■■□□ 2.53
TRAPPC3-208ENST00000616074 UPF1Q92900 1129 aaKnown RBP eCLIP30.86■■■□□ 2.533e-20■■■□□ 17.9
TRAPPC3-208ENST00000616074 ACIN1Q9UKV3 1341 aaKnown RBP30.86■■■□□ 2.53
TRAPPC3-208ENST00000616074 PXDNQ92626 1479 aa30.85■■■□□ 2.53
TRAPPC3-208ENST00000616074 YTHDC2Q9H6S0 1430 aaKnown RBP30.85■■■□□ 2.53
TRAPPC3-208ENST00000616074 NPHP3Q7Z494 1330 aa30.84■■■□□ 2.53
TRAPPC3-208ENST00000616074 QTRT2Q9H974 415 aaKnown RBP30.84■■■□□ 2.53
TRAPPC3-208ENST00000616074 FMN2Q9NZ56 1722 aa30.84■■■□□ 2.53
TRAPPC3-208ENST00000616074 NGLY1Q96IV0 654 aa30.83■■■□□ 2.53
TRAPPC3-208ENST00000616074 NRXN1Q9ULB1 1477 aa30.82■■■□□ 2.53
TRAPPC3-208ENST00000616074 RGS12O14924 1447 aa30.82■■■□□ 2.52
TRAPPC3-208ENST00000616074 NUTM2FA1L443 756 aa30.82■■■□□ 2.52
TRAPPC3-208ENST00000616074 MYOM2P54296 1465 aa30.81■■■□□ 2.52
TRAPPC3-208ENST00000616074 RAB3GAP2Q9H2M9 1393 aa30.8■■■□□ 2.52
TRAPPC3-208ENST00000616074 RBM6P78332 1123 aaKnown RBP30.8■■■□□ 2.52
TRAPPC3-208ENST00000616074 FOXO3O43524 673 aa30.79■■■□□ 2.52
TRAPPC3-208ENST00000616074 XPCQ01831 940 aaPredicted RBP30.78■■■□□ 2.52
TRAPPC3-208ENST00000616074 C14orf93Q9H972 538 aaKnown RBP30.78■■■□□ 2.52
TRAPPC3-208ENST00000616074 MARF1Q9Y4F3 1742 aaKnown RBP30.76■■■□□ 2.52
TRAPPC3-208ENST00000616074 KIF1AQ12756 1690 aa30.75■■■□□ 2.51
TRAPPC3-208ENST00000616074 CFAP70Q5T0N1 1121 aa30.75■■■□□ 2.51
TRAPPC3-208ENST00000616074 USP21Q9UK80 565 aa30.74■■■□□ 2.51
TRAPPC3-208ENST00000616074 SIRT1Q96EB6 747 aa30.73■■■□□ 2.51
TRAPPC3-208ENST00000616074 RGPD8O14715 1765 aaPredicted RBP30.73■■■□□ 2.51
TRAPPC3-208ENST00000616074 DHX57Q6P158 1386 aaKnown RBP30.71■■■□□ 2.51
TRAPPC3-208ENST00000616074 FNBP4Q8N3X1 1017 aaPredicted RBP30.71■■■□□ 2.51
TRAPPC3-208ENST00000616074 TRPC5Q9UL62 973 aaPredicted RBP30.68■■■□□ 2.5
TRAPPC3-208ENST00000616074 ATRNO75882 1429 aa30.67■■■□□ 2.5
TRAPPC3-208ENST00000616074 DLC1Q96QB1 1528 aa30.64■■■□□ 2.5
TRAPPC3-208ENST00000616074 PRAM1Q96QH2 718 aa30.64■■■□□ 2.5
TRAPPC3-208ENST00000616074 BCL9LQ86UU0 1499 aa30.63■■■□□ 2.49
TRAPPC3-208ENST00000616074 ADGRB1O14514 1584 aa30.63■■■□□ 2.49
TRAPPC3-208ENST00000616074 SAFB2Q14151 953 aaKnown RBP eCLIP30.63■■■□□ 2.49
TRAPPC3-208ENST00000616074 SPATA31A3Q5VYP0 1347 aa30.63■■■□□ 2.49
TRAPPC3-208ENST00000616074 KRT28Q7Z3Y7 464 aa30.6■■■□□ 2.49
TRAPPC3-208ENST00000616074 USP32Q8NFA0 1604 aa30.59■■■□□ 2.49
TRAPPC3-208ENST00000616074 PHF8Q9UPP1 1060 aa30.59■■■□□ 2.49
TRAPPC3-208ENST00000616074 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.59■■■□□ 2.49
TRAPPC3-208ENST00000616074 ADGRB2O60241 1585 aa30.58■■■□□ 2.49
TRAPPC3-208ENST00000616074 TNS3Q68CZ2 1445 aa30.56■■■□□ 2.48
TRAPPC3-208ENST00000616074 POGKQ9P215 609 aa30.56■■■□□ 2.48
TRAPPC3-208ENST00000616074 ATAD2Q6PL18 1390 aa30.55■■■□□ 2.48
TRAPPC3-208ENST00000616074 KDM2AQ9Y2K7 1162 aa30.53■■■□□ 2.48
TRAPPC3-208ENST00000616074 SLIT2O94813 1529 aa30.52■■■□□ 2.48
TRAPPC3-208ENST00000616074 DCAF11Q8TEB1 546 aa30.52■■■□□ 2.48
TRAPPC3-208ENST00000616074 TRAK1Q9UPV9 953 aa30.52■■■□□ 2.48
TRAPPC3-208ENST00000616074 EP400Q96L91 3159 aa30.52■■■□□ 2.48
TRAPPC3-208ENST00000616074 ANKARQ7Z5J8 1434 aa30.52■■■□□ 2.48
TRAPPC3-208ENST00000616074 ABCA3Q99758 1704 aa30.52■■■□□ 2.48
TRAPPC3-208ENST00000616074 PSME1Q06323 249 aa30.51■■■□□ 2.47
TRAPPC3-208ENST00000616074 SBNO1A3KN83 1393 aa30.5■■■□□ 2.47
TRAPPC3-208ENST00000616074 HRCP23327 699 aa30.49■■■□□ 2.47
TRAPPC3-208ENST00000616074 GJD4Q96KN9 370 aaPredicted RBP30.49■■■□□ 2.47
TRAPPC3-208ENST00000616074 PMFBP1Q8TBY8 1022 aa30.48■■■□□ 2.47
TRAPPC3-208ENST00000616074 HIRIP3Q9BW71 556 aaPredicted RBP30.48■■■□□ 2.47
TRAPPC3-208ENST00000616074 GLI3P10071 1580 aa30.48■■■□□ 2.47
TRAPPC3-208ENST00000616074 UNC5CLQ8IV45 518 aa30.47■■■□□ 2.47
TRAPPC3-208ENST00000616074 CABLES1Q8TDN4 633 aa30.47■■■□□ 2.47
TRAPPC3-208ENST00000616074 PLCH1Q4KWH8 1693 aa30.46■■■□□ 2.47
TRAPPC3-208ENST00000616074 RALGAPBQ86X10 1494 aa30.45■■■□□ 2.47
TRAPPC3-208ENST00000616074 TRPM3Q9HCF6 1732 aaPredicted RBP30.45■■■□□ 2.47
TRAPPC3-208ENST00000616074 HAP1P54257 671 aaPredicted RBP30.45■■■□□ 2.47
TRAPPC3-208ENST00000616074 MINK1Q8N4C8 1332 aaPredicted RBP30.45■■■□□ 2.46
TRAPPC3-208ENST00000616074 ARHGEF10O15013 1369 aa30.44■■■□□ 2.46
TRAPPC3-208ENST00000616074 PLEKHG5O94827 1062 aa30.44■■■□□ 2.46
TRAPPC3-208ENST00000616074 TULP4Q9NRJ4 1543 aa30.43■■■□□ 2.46
TRAPPC3-208ENST00000616074 LMOD2Q6P5Q4 547 aa30.43■■■□□ 2.46
TRAPPC3-208ENST00000616074 ARHGEF28Q8N1W1 1705 aaKnown RBP30.43■■■□□ 2.46
TRAPPC3-208ENST00000616074 NWD2Q9ULI1 1742 aa30.42■■■□□ 2.46
TRAPPC3-208ENST00000616074 STAC3Q96MF2 364 aa30.42■■■□□ 2.46
TRAPPC3-208ENST00000616074 PRR36Q9H6K5 1346 aa30.42■■■□□ 2.46
TRAPPC3-208ENST00000616074 EIF3AQ14152 1382 aaKnown RBP30.41■■■□□ 2.46
TRAPPC3-208ENST00000616074 ALS2Q96Q42 1657 aa30.39■■■□□ 2.46
TRAPPC3-208ENST00000616074 WASLO00401 505 aaPredicted RBP30.38■■■□□ 2.45
TRAPPC3-208ENST00000616074 BRWD3Q6RI45 1802 aa30.38■■■□□ 2.45
TRAPPC3-208ENST00000616074 GPRASP1Q5JY77 1395 aa30.34■■■□□ 2.45
TRAPPC3-208ENST00000616074 ITSN1Q15811 1721 aa30.33■■■□□ 2.45
TRAPPC3-208ENST00000616074 VPS72Q15906 364 aa30.33■■■□□ 2.45
TRAPPC3-208ENST00000616074 NRAPQ86VF7 1730 aa30.32■■■□□ 2.44
TRAPPC3-208ENST00000616074 CRYBG1Q9Y4K1 1723 aa30.31■■■□□ 2.44
TRAPPC3-208ENST00000616074 FAM83GA6ND36 823 aa30.3■■■□□ 2.44
TRAPPC3-208ENST00000616074 ATP7BP35670 1465 aa30.3■■■□□ 2.44
TRAPPC3-208ENST00000616074 KIAA1210Q9ULL0 1709 aa30.3■■■□□ 2.44
TRAPPC3-208ENST00000616074 CCDC125Q86Z20 511 aa30.29■■■□□ 2.44
TRAPPC3-208ENST00000616074 SEPT12Q8IYM1 358 aa30.27■■■□□ 2.44
TRAPPC3-208ENST00000616074 NGDNQ8NEJ9 315 aaKnown RBP30.27■■■□□ 2.44
TRAPPC3-208ENST00000616074 CCDC9Q9Y3X0 531 aaKnown RBP30.27■■■□□ 2.44
TRAPPC3-208ENST00000616074 COL14A1Q05707 1796 aaKnown RBP30.26■■■□□ 2.44
TRAPPC3-208ENST00000616074 SRCAPQ6ZRS2 3230 aa30.26■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms