RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 PTMSP20962 102 aa12.92□□□□□ -0.34
TNFAIP3-208ENST00000615468 PCDHB15Q9Y5E8 787 aa12.92□□□□□ -0.34
TNFAIP3-208ENST00000615468 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.91□□□□□ -0.34
TNFAIP3-208ENST00000615468 E9PSI1 815 aa12.91□□□□□ -0.34
TNFAIP3-208ENST00000615468 TERF1P54274 439 aa12.91□□□□□ -0.34
TNFAIP3-208ENST00000615468 MBD5Q9P267 1494 aa12.91□□□□□ -0.34
TNFAIP3-208ENST00000615468 NAP1L2Q9ULW6 460 aaPredicted RBP12.91□□□□□ -0.34
TNFAIP3-208ENST00000615468 PPP1R9BQ96SB3 815 aa12.91□□□□□ -0.34
TNFAIP3-208ENST00000615468 PDIA4P13667 645 aaKnown RBP12.9□□□□□ -0.34
TNFAIP3-208ENST00000615468 MPNDQ8N594 471 aa12.9□□□□□ -0.34
TNFAIP3-208ENST00000615468 GCC2Q8IWJ2 1684 aa12.9□□□□□ -0.34
TNFAIP3-208ENST00000615468 MAPK8IP2Q13387 824 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP3-208ENST00000615468 CCDC94Q9BW85 323 aaPredicted RBP12.9□□□□□ -0.34
TNFAIP3-208ENST00000615468 PPP2R1AP30153 589 aa12.9□□□□□ -0.34
TNFAIP3-208ENST00000615468 PPP4R3BQ5MIZ7 849 aa12.9□□□□□ -0.34
TNFAIP3-208ENST00000615468 POLR1AO95602 1720 aaPredicted RBP12.9□□□□□ -0.35
TNFAIP3-208ENST00000615468 IGSF3O75054 1194 aa12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 TMF1P82094 1093 aa12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 DMTNQ08495 405 aa12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 TSC1Q92574 1164 aa12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 CDC42BPAQ5VT25 1732 aa12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 FTSJ3Q8IY81 847 aaKnown RBP12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 ZMYM4Q5VZL5 1548 aa12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 SSFA2P28290 1259 aa12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 MCTP1Q6DN14 999 aa12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 SASS6Q6UVJ0 657 aa12.89□□□□□ -0.35
TNFAIP3-208ENST00000615468 PLCH2O75038 1416 aa12.88□□□□□ -0.35
TNFAIP3-208ENST00000615468 ASXL2Q76L83 1435 aa12.88□□□□□ -0.35
TNFAIP3-208ENST00000615468 VGLL3A8MV65 326 aa12.88□□□□□ -0.35
TNFAIP3-208ENST00000615468 SAMD9LQ8IVG5 1584 aa12.88□□□□□ -0.35
TNFAIP3-208ENST00000615468 TNNQ9UQP3 1299 aa12.88□□□□□ -0.35
TNFAIP3-208ENST00000615468 RNF214Q8ND24 703 aa12.87□□□□□ -0.35
TNFAIP3-208ENST00000615468 NOL7Q9UMY1 257 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-208ENST00000615468 ARHGEF12Q9NZN5 1544 aa12.87□□□□□ -0.35
TNFAIP3-208ENST00000615468 RRP7AQ9Y3A4 280 aaKnown RBP12.87□□□□□ -0.35
TNFAIP3-208ENST00000615468 FAM69CQ0P6D2 419 aa12.87□□□□□ -0.35
TNFAIP3-208ENST00000615468 PLCD3Q8N3E9 789 aa12.86□□□□□ -0.35
TNFAIP3-208ENST00000615468 FAM177BA6PVY3 158 aa12.86□□□□□ -0.35
TNFAIP3-208ENST00000615468 SPDYE4A6NLX3 237 aa12.86□□□□□ -0.35
TNFAIP3-208ENST00000615468 JARID2Q92833 1246 aaPredicted RBP12.86□□□□□ -0.35
TNFAIP3-208ENST00000615468 NKTRP30414 1462 aaKnown RBP12.86□□□□□ -0.35
TNFAIP3-208ENST00000615468 FANCAO15360 1455 aa12.85□□□□□ -0.35
TNFAIP3-208ENST00000615468 GTF2E1P29083 439 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-208ENST00000615468 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
TNFAIP3-208ENST00000615468 ZKSCAN5Q9Y2L8 839 aa12.85□□□□□ -0.35
TNFAIP3-208ENST00000615468 DMRT2Q9Y5R5 561 aa12.85□□□□□ -0.35
TNFAIP3-208ENST00000615468 SAFB2Q14151 953 aaKnown RBP eCLIP12.85□□□□□ -0.35
TNFAIP3-208ENST00000615468 RAB3GAP1Q15042 981 aa12.85□□□□□ -0.35
TNFAIP3-208ENST00000615468 KDM5CP41229 1560 aa12.85□□□□□ -0.35
TNFAIP3-208ENST00000615468 ADGRL2O95490 1459 aa12.85□□□□□ -0.35
TNFAIP3-208ENST00000615468 ZSCAN20P17040 1043 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-208ENST00000615468 ZNF771Q7L3S4 317 aaPredicted RBP12.84□□□□□ -0.35
TNFAIP3-208ENST00000615468 CGNQ9P2M7 1197 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-208ENST00000615468 NLRP1Q9C000 1473 aa12.84□□□□□ -0.35
TNFAIP3-208ENST00000615468 UTP14CQ5TAP6 766 aaKnown RBP12.84□□□□□ -0.35
TNFAIP3-208ENST00000615468 STAC3Q96MF2 364 aa12.84□□□□□ -0.35
TNFAIP3-208ENST00000615468 KANK1Q14678 1352 aa12.84□□□□□ -0.35
TNFAIP3-208ENST00000615468 RLBP1P12271 317 aa12.84□□□□□ -0.35
TNFAIP3-208ENST00000615468 ZNF500O60304 480 aaPredicted RBP12.83□□□□□ -0.36
TNFAIP3-208ENST00000615468 KLHL40Q2TBA0 621 aa12.83□□□□□ -0.36
TNFAIP3-208ENST00000615468 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
TNFAIP3-208ENST00000615468 CCDC39Q9UFE4 941 aa12.83□□□□□ -0.36
TNFAIP3-208ENST00000615468 ADGRL1O94910 1474 aa12.83□□□□□ -0.36
TNFAIP3-208ENST00000615468 TPRNQ4KMQ1 711 aa12.83□□□□□ -0.36
TNFAIP3-208ENST00000615468 RBSNQ9H1K0 784 aa12.83□□□□□ -0.36
TNFAIP3-208ENST00000615468 WDR7Q9Y4E6 1490 aa12.83□□□□□ -0.36
TNFAIP3-208ENST00000615468 ZCCHC11Q5TAX3 1644 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-208ENST00000615468 FOXD4L5Q5VV16 416 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-208ENST00000615468 FOXD4L4Q8WXT5 416 aaPredicted RBP12.82□□□□□ -0.36
TNFAIP3-208ENST00000615468 RALGAPBQ86X10 1494 aa12.82□□□□□ -0.36
TNFAIP3-208ENST00000615468 BAG4O95429 457 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-208ENST00000615468 PRIM1P49642 420 aaKnown RBP12.82□□□□□ -0.36
TNFAIP3-208ENST00000615468 KIAA2012Q0VF49 1180 aa12.82□□□□□ -0.36
TNFAIP3-208ENST00000615468 CD109Q6YHK3 1445 aa12.82□□□□□ -0.36
TNFAIP3-208ENST00000615468 ZNF521Q96K83 1311 aa12.81□□□□□ -0.36
TNFAIP3-208ENST00000615468 ZSCAN23Q3MJ62 389 aa12.81□□□□□ -0.36
TNFAIP3-208ENST00000615468 HS1BP3Q53T59 392 aa12.81□□□□□ -0.36
TNFAIP3-208ENST00000615468 SMC5Q8IY18 1101 aa12.81□□□□□ -0.36
TNFAIP3-208ENST00000615468 FAM135AQ9P2D6 1515 aa12.81□□□□□ -0.36
TNFAIP3-208ENST00000615468 PRPF40AO75400 957 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-208ENST00000615468 STAG3Q9UJ98 1225 aa12.81□□□□□ -0.36
TNFAIP3-208ENST00000615468 GTPBP4Q9BZE4 634 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-208ENST00000615468 RBM27Q9P2N5 1060 aaKnown RBP12.81□□□□□ -0.36
TNFAIP3-208ENST00000615468 ADCY10Q96PN6 1610 aa12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 PLCB2Q00722 1185 aa12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 ITPRIPQ8IWB1 547 aa12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 LNPKQ9C0E8 428 aa12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 CLASP1Q7Z460 1538 aa12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 DISP3Q9P2K9 1392 aa12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 CDC42BPBQ9Y5S2 1711 aa12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 KIF20AO95235 890 aa12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 RBM42Q9BTD8 480 aaKnown RBP12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 CFAP70Q5T0N1 1121 aa12.8□□□□□ -0.36
TNFAIP3-208ENST00000615468 K7ELQ4 463 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-208ENST00000615468 LETM1O95202 739 aaPredicted RBP12.79□□□□□ -0.36
TNFAIP3-208ENST00000615468 SHANK2Q9UPX8 1470 aa12.79□□□□□ -0.36
TNFAIP3-208ENST00000615468 SYCE3A1L190 88 aa12.78□□□□□ -0.36
TNFAIP3-208ENST00000615468 STK26Q9P289 416 aa12.78□□□□□ -0.36
TNFAIP3-208ENST00000615468 RARSP54136 660 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms