RNA–Protein interactions for RNA: ENST00000615285.4

NCAM1-222, Transcript of neural cell adhesion molecule 1, human

TSL 5 BASIC

Gene NCAM1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCAM1-222	ENST00000615285	TNR	Q92752	1358 aa		11.88	□□□□□ -0.51
NCAM1-222	ENST00000615285	ATP10B	O94823	1461 aa		11.87	□□□□□ -0.51
NCAM1-222	ENST00000615285	ABCC10	Q5T3U5	1492 aa		11.87	□□□□□ -0.51
NCAM1-222	ENST00000615285	EIF2S2	P20042	333 aa	Known RBP	11.87	□□□□□ -0.51
NCAM1-222	ENST00000615285	NAP1L5	Q96NT1	182 aa	Predicted RBP	11.87	□□□□□ -0.51
NCAM1-222	ENST00000615285	KDM5B	Q9UGL1	1544 aa		11.86	□□□□□ -0.51
NCAM1-222	ENST00000615285	ABCC2	Q92887	1545 aa		11.86	□□□□□ -0.51
NCAM1-222	ENST00000615285	NUP160	Q12769	1436 aa		11.86	□□□□□ -0.51
NCAM1-222	ENST00000615285	NCOA1	Q15788	1441 aa		11.86	□□□□□ -0.51
NCAM1-222	ENST00000615285	RUFY2	Q8WXA3	655 aa		11.86	□□□□□ -0.51
NCAM1-222	ENST00000615285	APAF1	O14727	1248 aa		11.86	□□□□□ -0.51
NCAM1-222	ENST00000615285	CSPP1	Q1MSJ5	1256 aa		11.86	□□□□□ -0.51
NCAM1-222	ENST00000615285	SPRYD3	Q8NCJ5	442 aa		11.86	□□□□□ -0.51
NCAM1-222	ENST00000615285	TRIM34	Q9BYJ4	488 aa		11.86	□□□□□ -0.51
NCAM1-222	ENST00000615285	PTMA	P06454	111 aa	Known RBP	11.85	□□□□□ -0.51
NCAM1-222	ENST00000615285	KIF6	Q6ZMV9	814 aa		11.85	□□□□□ -0.51
NCAM1-222	ENST00000615285	SLC26A8	Q96RN1	970 aa		11.85	□□□□□ -0.51
NCAM1-222	ENST00000615285	GPATCH8	Q9UKJ3	1502 aa	Known RBP	11.85	□□□□□ -0.51
NCAM1-222	ENST00000615285	A2M	P01023	1474 aa		11.85	□□□□□ -0.51
NCAM1-222	ENST00000615285	NINL	Q9Y2I6	1382 aa		11.85	□□□□□ -0.51
NCAM1-222	ENST00000615285	CCDC61	Q9Y6R9	512 aa		11.85	□□□□□ -0.51
NCAM1-222	ENST00000615285	CCDC30	Q5VVM6	783 aa		11.84	□□□□□ -0.51
NCAM1-222	ENST00000615285	TOM1L2	Q6ZVM7	507 aa		11.84	□□□□□ -0.51
NCAM1-222	ENST00000615285	RBM33	Q96EV2	1170 aa	Known RBP	11.84	□□□□□ -0.51
NCAM1-222	ENST00000615285	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.84	□□□□□ -0.51
NCAM1-222	ENST00000615285	PLCB2	Q00722	1185 aa		11.84	□□□□□ -0.51
NCAM1-222	ENST00000615285	PRDM11	Q9NQV5	511 aa		11.84	□□□□□ -0.51
NCAM1-222	ENST00000615285	FKBP5	Q13451	457 aa	Predicted RBP	11.84	□□□□□ -0.51
NCAM1-222	ENST00000615285	CENPQ	Q7L2Z9	268 aa	Predicted RBP	11.84	□□□□□ -0.51
NCAM1-222	ENST00000615285	G3BP1	Q13283	466 aa	Known RBP eCLIP	11.83	□□□□□ -0.52
NCAM1-222	ENST00000615285	VPS37D	Q86XT2	251 aa		11.83	□□□□□ -0.52
NCAM1-222	ENST00000615285	RIC3	Q7Z5B4	369 aa		11.83	□□□□□ -0.52
NCAM1-222	ENST00000615285	CLUAP1	Q96AJ1	413 aa		11.83	□□□□□ -0.52
NCAM1-222	ENST00000615285	CABP1	Q9NZU7	370 aa		11.83	□□□□□ -0.52
NCAM1-222	ENST00000615285	NUTM2G	Q5VZR2	741 aa		11.83	□□□□□ -0.52
NCAM1-222	ENST00000615285	MTHFS	P49914	203 aa		11.82	□□□□□ -0.52
NCAM1-222	ENST00000615285	STRN4	Q9NRL3	753 aa		11.82	□□□□□ -0.52
NCAM1-222	ENST00000615285	NUP153	P49790	1475 aa	Known RBP	11.82	□□□□□ -0.52
NCAM1-222	ENST00000615285	GBP4	Q96PP9	640 aa		11.82	□□□□□ -0.52
NCAM1-222	ENST00000615285	CFAP74	Q9C0B2	1584 aa		11.82	□□□□□ -0.52
NCAM1-222	ENST00000615285	DZIP1L	Q8IYY4	767 aa	Known RBP	11.81	□□□□□ -0.52
NCAM1-222	ENST00000615285	NUDT16	Q96DE0	195 aa	Known RBP	11.81	□□□□□ -0.52
NCAM1-222	ENST00000615285	IFIT2	P09913	472 aa	Known RBP	11.81	□□□□□ -0.52
NCAM1-222	ENST00000615285	AMER1	Q5JTC6	1135 aa	Predicted RBP	11.81	□□□□□ -0.52
NCAM1-222	ENST00000615285	UHRF1BP1L	A0JNW5	1464 aa		11.81	□□□□□ -0.52
NCAM1-222	ENST00000615285	HMOX1	P09601	288 aa		11.81	□□□□□ -0.52
NCAM1-222	ENST00000615285	NOP58	Q9Y2X3	529 aa	Known RBP	11.81	□□□□□ -0.52
NCAM1-222	ENST00000615285	ST18	O60284	1047 aa		11.81	□□□□□ -0.52
NCAM1-222	ENST00000615285	CT47B1	P0C2W7	299 aa	Predicted RBP	11.81	□□□□□ -0.52
NCAM1-222	ENST00000615285	ELL2	O00472	640 aa	Predicted RBP	11.8	□□□□□ -0.52
NCAM1-222	ENST00000615285	CABP4	P57796	275 aa		11.8	□□□□□ -0.52
NCAM1-222	ENST00000615285	L1TD1	Q5T7N2	865 aa	Known RBP	11.8	□□□□□ -0.52
NCAM1-222	ENST00000615285	SYNE3	Q6ZMZ3	975 aa		11.8	□□□□□ -0.52
NCAM1-222	ENST00000615285	ERC2	O15083	957 aa		11.8	□□□□□ -0.52
NCAM1-222	ENST00000615285	PPP2R1A	P30153	589 aa		11.8	□□□□□ -0.52
NCAM1-222	ENST00000615285	CADPS2	Q86UW7	1296 aa		11.8	□□□□□ -0.52
NCAM1-222	ENST00000615285	SHANK2	Q9UPX8	1470 aa		11.8	□□□□□ -0.52
NCAM1-222	ENST00000615285	NUTM2B	A6NNL0	878 aa	Predicted RBP	11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	NUTM2E	B1AL46	878 aa	Predicted RBP	11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	NUTM2A	Q8IVF1	878 aa	Predicted RBP	11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	SYAP1	Q96A49	352 aa	Predicted RBP	11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	TOMM22	Q9NS69	142 aa		11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	ABCA5	Q8WWZ7	1642 aa		11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	DIAPH3	Q9NSV4	1193 aa		11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	PIP4K2B	P78356	416 aa		11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	NBPF1	Q3BBV0	1214 aa		11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	GNAI3	P08754	354 aa		11.79	□□□□□ -0.52
NCAM1-222	ENST00000615285	MSH6	P52701	1360 aa		11.78	□□□□□ -0.52
NCAM1-222	ENST00000615285	RRP1	P56182	461 aa	Known RBP	11.78	□□□□□ -0.52
NCAM1-222	ENST00000615285	CTDP1	Q9Y5B0	961 aa	Predicted RBP	11.78	□□□□□ -0.52
NCAM1-222	ENST00000615285	CPLX2	Q6PUV4	134 aa	Known RBP	11.78	□□□□□ -0.52
NCAM1-222	ENST00000615285	AMOTL2	Q9Y2J4	779 aa		11.78	□□□□□ -0.52
NCAM1-222	ENST00000615285	NSD2	O96028	1365 aa		11.78	□□□□□ -0.52
NCAM1-222	ENST00000615285	SYCP2	Q9BX26	1530 aa		11.77	□□□□□ -0.52
NCAM1-222	ENST00000615285	PHF8	Q9UPP1	1060 aa		11.77	□□□□□ -0.52
NCAM1-222	ENST00000615285	TPM4	P67936	248 aa		11.77	□□□□□ -0.53
NCAM1-222	ENST00000615285	AKAP17A	Q02040	695 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-222	ENST00000615285	PRKAR2B	P31323	418 aa		11.77	□□□□□ -0.53
NCAM1-222	ENST00000615285	MFAP1	P55081	439 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-222	ENST00000615285	ZNF530	Q6P9A1	599 aa	Predicted RBP	11.77	□□□□□ -0.53
NCAM1-222	ENST00000615285	SCAF11	Q99590	1463 aa	Known RBP	11.77	□□□□□ -0.53
NCAM1-222	ENST00000615285	UBTFL1	P0CB47	393 aa	Predicted RBP	11.76	□□□□□ -0.53
NCAM1-222	ENST00000615285	RNF20	Q5VTR2	975 aa		11.76	□□□□□ -0.53
NCAM1-222	ENST00000615285	RBM42	Q9BTD8	480 aa	Known RBP	11.76	□□□□□ -0.53
NCAM1-222	ENST00000615285	REC8	O95072	547 aa		11.76	□□□□□ -0.53
NCAM1-222	ENST00000615285	IDI1	Q13907	227 aa		11.76	□□□□□ -0.53
NCAM1-222	ENST00000615285	ANKRD45	Q5TZF3	282 aa		11.76	□□□□□ -0.53
NCAM1-222	ENST00000615285	SLC12A5	Q9H2X9	1139 aa		11.76	□□□□□ -0.53
NCAM1-222	ENST00000615285	CLSTN1	O94985	981 aa		11.76	□□□□□ -0.53
NCAM1-222	ENST00000615285	ARID3A	Q99856	593 aa		11.76	□□□□□ -0.53
NCAM1-222	ENST00000615285	ERC1	Q8IUD2	1116 aa		11.75	□□□□□ -0.53
NCAM1-222	ENST00000615285	DEK	P35659	375 aa	Known RBP	11.75	□□□□□ -0.53
NCAM1-222	ENST00000615285	CHAF1A	Q13111	956 aa	Predicted RBP	11.75	□□□□□ -0.53
NCAM1-222	ENST00000615285	AMOT	Q4VCS5	1084 aa		11.75	□□□□□ -0.53
NCAM1-222	ENST00000615285	CFAP43	Q8NDM7	1665 aa		11.75	□□□□□ -0.53
NCAM1-222	ENST00000615285	WASL	O00401	505 aa	Predicted RBP	11.75	□□□□□ -0.53
NCAM1-222	ENST00000615285	TOM1	O60784	492 aa		11.75	□□□□□ -0.53
NCAM1-222	ENST00000615285	FCHSD2	O94868	740 aa		11.75	□□□□□ -0.53
NCAM1-222	ENST00000615285	ZKSCAN1	P17029	563 aa	Predicted RBP	11.74	□□□□□ -0.53
NCAM1-222	ENST00000615285	ZNF428	Q96B54	188 aa		11.74	□□□□□ -0.53

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