RNA–Protein interactions for RNA: ENST00000614402.4

PMPCA-208, Transcript of peptidase, mitochondrial processing alpha subunit, humanhuman

TSL 2

Gene PMPCA, Length 505 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMPCA-208ENST00000614402 LRPPRCP42704 1394 aaKnown RBP30.36■■■□□ 2.45
PMPCA-208ENST00000614402 AFF2P51816 1311 aa30.35■■■□□ 2.45
PMPCA-208ENST00000614402 CDK12Q9NYV4 1490 aaPredicted RBP30.32■■■□□ 2.44
PMPCA-208ENST00000614402 ABCC11Q96J66 1382 aa30.32■■■□□ 2.44
PMPCA-208ENST00000614402 NRXN1Q9ULB1 1477 aa30.3■■■□□ 2.44
PMPCA-208ENST00000614402 RXRBP28702 533 aa30.29■■■□□ 2.44
PMPCA-208ENST00000614402 COL22A1Q8NFW1 1626 aaPredicted RBP30.29■■■□□ 2.44
PMPCA-208ENST00000614402 STK26Q9P289 416 aa30.28■■■□□ 2.44
PMPCA-208ENST00000614402 PLEKHH1Q9ULM0 1364 aa30.28■■■□□ 2.44
PMPCA-208ENST00000614402 MYOM2P54296 1465 aa30.27■■■□□ 2.44
PMPCA-208ENST00000614402 TMEM132EQ6IEE7 984 aa30.27■■■□□ 2.44
PMPCA-208ENST00000614402 WAPLQ7Z5K2 1190 aa30.27■■■□□ 2.44
PMPCA-208ENST00000614402 C8orf37Q96NL8 207 aa30.27■■■□□ 2.44
PMPCA-208ENST00000614402 YTHDC2Q9H6S0 1430 aaKnown RBP30.27■■■□□ 2.44
PMPCA-208ENST00000614402 PXDNQ92626 1479 aa30.26■■■□□ 2.44
PMPCA-208ENST00000614402 RAB3GAP2Q9H2M9 1393 aa30.26■■■□□ 2.43
PMPCA-208ENST00000614402 NPHP3Q7Z494 1330 aa30.23■■■□□ 2.43
PMPCA-208ENST00000614402 ESCO1Q5FWF5 840 aa30.23■■■□□ 2.43
PMPCA-208ENST00000614402 FMN2Q9NZ56 1722 aa30.22■■■□□ 2.43
PMPCA-208ENST00000614402 C14orf93Q9H972 538 aaKnown RBP30.22■■■□□ 2.43
PMPCA-208ENST00000614402 ADAMTS2O95450 1211 aa30.2■■■□□ 2.43
PMPCA-208ENST00000614402 UPF1Q92900 1129 aaKnown RBP eCLIP30.19■■■□□ 2.42
PMPCA-208ENST00000614402 SIRT1Q96EB6 747 aa30.19■■■□□ 2.42
PMPCA-208ENST00000614402 RGS12O14924 1447 aa30.18■■■□□ 2.42
PMPCA-208ENST00000614402 QTRT2Q9H974 415 aaKnown RBP30.17■■■□□ 2.42
PMPCA-208ENST00000614402 FOXO3O43524 673 aa30.16■■■□□ 2.42
PMPCA-208ENST00000614402 NGLY1Q96IV0 654 aa30.16■■■□□ 2.42
PMPCA-208ENST00000614402 RBM6P78332 1123 aaKnown RBP30.15■■■□□ 2.42
PMPCA-208ENST00000614402 KIF1AQ12756 1690 aa30.14■■■□□ 2.42
PMPCA-208ENST00000614402 NUTM2FA1L443 756 aa30.14■■■□□ 2.42
PMPCA-208ENST00000614402 CFAP70Q5T0N1 1121 aa30.14■■■□□ 2.42
PMPCA-208ENST00000614402 XPCQ01831 940 aaPredicted RBP30.12■■■□□ 2.41
PMPCA-208ENST00000614402 FNBP4Q8N3X1 1017 aaPredicted RBP30.12■■■□□ 2.41
PMPCA-208ENST00000614402 DHX57Q6P158 1386 aaKnown RBP30.12■■■□□ 2.41
PMPCA-208ENST00000614402 MARF1Q9Y4F3 1742 aaKnown RBP30.1■■■□□ 2.41
PMPCA-208ENST00000614402 DLC1Q96QB1 1528 aa30.1■■■□□ 2.41
PMPCA-208ENST00000614402 ADGRB1O14514 1584 aa30.09■■■□□ 2.41
PMPCA-208ENST00000614402 USP21Q9UK80 565 aa30.08■■■□□ 2.41
PMPCA-208ENST00000614402 ATRNO75882 1429 aa30.06■■■□□ 2.4
PMPCA-208ENST00000614402 RGPD8O14715 1765 aaPredicted RBP30.05■■■□□ 2.4
PMPCA-208ENST00000614402 PRAM1Q96QH2 718 aa30.04■■■□□ 2.4
PMPCA-208ENST00000614402 TRPC5Q9UL62 973 aaPredicted RBP30.04■■■□□ 2.4
PMPCA-208ENST00000614402 ADGRB2O60241 1585 aa30.03■■■□□ 2.4
PMPCA-208ENST00000614402 SPATA31A3Q5VYP0 1347 aa30.03■■■□□ 2.4
PMPCA-208ENST00000614402 BCL9LQ86UU0 1499 aa30.03■■■□□ 2.4
PMPCA-208ENST00000614402 HRCP23327 699 aa30.01■■■□□ 2.39
PMPCA-208ENST00000614402 USP32Q8NFA0 1604 aa30■■■□□ 2.39
PMPCA-208ENST00000614402 PHF8Q9UPP1 1060 aa29.98■■■□□ 2.39
PMPCA-208ENST00000614402 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.97■■■□□ 2.39
PMPCA-208ENST00000614402 SAFB2Q14151 953 aaKnown RBP eCLIP29.97■■■□□ 2.39
PMPCA-208ENST00000614402 KRT28Q7Z3Y7 464 aa29.97■■■□□ 2.39
PMPCA-208ENST00000614402 TNS3Q68CZ2 1445 aa29.96■■■□□ 2.39
PMPCA-208ENST00000614402 ANKARQ7Z5J8 1434 aa29.96■■■□□ 2.39
PMPCA-208ENST00000614402 SLIT2O94813 1529 aa29.94■■■□□ 2.38
PMPCA-208ENST00000614402 DCAF11Q8TEB1 546 aa29.93■■■□□ 2.38
PMPCA-208ENST00000614402 POGKQ9P215 609 aa29.93■■■□□ 2.38
PMPCA-208ENST00000614402 SBNO1A3KN83 1393 aa29.92■■■□□ 2.38
PMPCA-208ENST00000614402 STAC3Q96MF2 364 aa29.92■■■□□ 2.38
PMPCA-208ENST00000614402 ATAD2Q6PL18 1390 aa29.91■■■□□ 2.38
PMPCA-208ENST00000614402 KDM2AQ9Y2K7 1162 aa29.91■■■□□ 2.38
PMPCA-208ENST00000614402 ABCA3Q99758 1704 aa29.91■■■□□ 2.38
PMPCA-208ENST00000614402 TRAK1Q9UPV9 953 aa29.9■■■□□ 2.38
PMPCA-208ENST00000614402 PSME1Q06323 249 aa29.89■■■□□ 2.38
PMPCA-208ENST00000614402 GJD4Q96KN9 370 aaPredicted RBP29.87■■■□□ 2.37
PMPCA-208ENST00000614402 TULP4Q9NRJ4 1543 aa29.86■■■□□ 2.37
PMPCA-208ENST00000614402 TRPM3Q9HCF6 1732 aaPredicted RBP29.86■■■□□ 2.37
PMPCA-208ENST00000614402 GLI3P10071 1580 aa29.86■■■□□ 2.37
PMPCA-208ENST00000614402 UNC5CLQ8IV45 518 aa29.85■■■□□ 2.37
PMPCA-208ENST00000614402 HIRIP3Q9BW71 556 aaPredicted RBP29.85■■■□□ 2.37
PMPCA-208ENST00000614402 ARHGEF10O15013 1369 aa29.85■■■□□ 2.37
PMPCA-208ENST00000614402 ARHGEF28Q8N1W1 1705 aaKnown RBP29.85■■■□□ 2.37
PMPCA-208ENST00000614402 EIF3AQ14152 1382 aaKnown RBP29.84■■■□□ 2.37
PMPCA-208ENST00000614402 EP400Q96L91 3159 aa29.83■■■□□ 2.37
PMPCA-208ENST00000614402 RALGAPBQ86X10 1494 aa29.83■■■□□ 2.37
PMPCA-208ENST00000614402 MINK1Q8N4C8 1332 aaPredicted RBP29.83■■■□□ 2.37
PMPCA-208ENST00000614402 PRR36Q9H6K5 1346 aa29.83■■■□□ 2.37
PMPCA-208ENST00000614402 PMFBP1Q8TBY8 1022 aa29.83■■■□□ 2.37
PMPCA-208ENST00000614402 CABLES1Q8TDN4 633 aa29.82■■■□□ 2.36
PMPCA-208ENST00000614402 PLCH1Q4KWH8 1693 aa29.82■■■□□ 2.36
PMPCA-208ENST00000614402 NWD2Q9ULI1 1742 aa29.81■■■□□ 2.36
PMPCA-208ENST00000614402 ALS2Q96Q42 1657 aa29.81■■■□□ 2.36
PMPCA-208ENST00000614402 WASLO00401 505 aaPredicted RBP29.79■■■□□ 2.36
PMPCA-208ENST00000614402 HAP1P54257 671 aaPredicted RBP29.77■■■□□ 2.36
PMPCA-208ENST00000614402 LMOD2Q6P5Q4 547 aa29.75■■■□□ 2.35
PMPCA-208ENST00000614402 KIAA1210Q9ULL0 1709 aa29.75■■■□□ 2.35
PMPCA-208ENST00000614402 ATP7BP35670 1465 aa29.74■■■□□ 2.35
PMPCA-208ENST00000614402 GPRASP1Q5JY77 1395 aa29.73■■■□□ 2.35
PMPCA-208ENST00000614402 ITSN1Q15811 1721 aa29.72■■■□□ 2.35
PMPCA-208ENST00000614402 CRYBG1Q9Y4K1 1723 aa29.72■■■□□ 2.35
PMPCA-208ENST00000614402 VPS72Q15906 364 aa29.72■■■□□ 2.35
PMPCA-208ENST00000614402 PLEKHG5O94827 1062 aa29.71■■■□□ 2.35
PMPCA-208ENST00000614402 NRAPQ86VF7 1730 aa29.71■■■□□ 2.35
PMPCA-208ENST00000614402 BRWD3Q6RI45 1802 aa29.7■■■□□ 2.34
PMPCA-208ENST00000614402 FAM83GA6ND36 823 aa29.69■■■□□ 2.34
PMPCA-208ENST00000614402 CCDC125Q86Z20 511 aa29.67■■■□□ 2.34
PMPCA-208ENST00000614402 TOPAZ1Q8N9V7 1692 aa29.66■■■□□ 2.34
PMPCA-208ENST00000614402 COL14A1Q05707 1796 aaKnown RBP29.65■■■□□ 2.34
PMPCA-208ENST00000614402 ONECUT3O60422 494 aaPredicted RBP29.65■■■□□ 2.34
PMPCA-208ENST00000614402 NGDNQ8NEJ9 315 aaKnown RBP29.65■■■□□ 2.34
PMPCA-208ENST00000614402 NUDT16Q96DE0 195 aaKnown RBP29.64■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms