RNA–Protein interactions for RNA: ENST00000612123.3

PBX1-221, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 6,062 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-221ENST00000612123 EPRSP07814 1512 aaKnown RBP8.34□□□□□ -1.07
PBX1-221ENST00000612123 MAPKBP1O60336 1514 aa8.34□□□□□ -1.07
PBX1-221ENST00000612123 ADGRL1O94910 1474 aa8.34□□□□□ -1.07
PBX1-221ENST00000612123 ITSN2Q9NZM3 1697 aa8.34□□□□□ -1.07
PBX1-221ENST00000612123 DISP1Q96F81 1524 aa8.34□□□□□ -1.07
PBX1-221ENST00000612123 TXNDC2Q86VQ3 553 aa8.34□□□□□ -1.07
PBX1-221ENST00000612123 TAF7LQ5H9L4 462 aa8.33□□□□□ -1.08
PBX1-221ENST00000612123 R3HCC1Q9Y3T6 440 aaKnown RBP8.33□□□□□ -1.08
PBX1-221ENST00000612123 NUTM2FA1L443 756 aa8.33□□□□□ -1.08
PBX1-221ENST00000612123 GORABQ5T7V8 394 aa8.33□□□□□ -1.08
PBX1-221ENST00000612123 GPRASP1Q5JY77 1395 aa8.33□□□□□ -1.08
PBX1-221ENST00000612123 PTMSP20962 102 aa8.33□□□□□ -1.08
PBX1-221ENST00000612123 TRIM44Q96DX7 344 aaPredicted RBP8.33□□□□□ -1.08
PBX1-221ENST00000612123 NRDCO43847 1150 aa8.32□□□□□ -1.08
PBX1-221ENST00000612123 LTV1Q96GA3 475 aaPredicted RBP8.32□□□□□ -1.08
PBX1-221ENST00000612123 ZNF692Q9BU19 519 aaPredicted RBP8.32□□□□□ -1.08
PBX1-221ENST00000612123 NEO1Q92859 1461 aa8.32□□□□□ -1.08
PBX1-221ENST00000612123 RAPGEF3O95398 923 aa8.32□□□□□ -1.08
PBX1-221ENST00000612123 CGNQ9P2M7 1197 aaKnown RBP8.32□□□□□ -1.08
PBX1-221ENST00000612123 GOLGA6L4A6NEF3 574 aa8.32□□□□□ -1.08
PBX1-221ENST00000612123 RRP9O43818 475 aaKnown RBP8.32□□□□□ -1.08
PBX1-221ENST00000612123 ATP10BO94823 1461 aa8.32□□□□□ -1.08
PBX1-221ENST00000612123 NEXNQ0ZGT2 675 aa8.32□□□□□ -1.08
PBX1-221ENST00000612123 ZBED9Q6R2W3 1325 aa8.31□□□□□ -1.08
PBX1-221ENST00000612123 CCDC7Q96M83 1385 aa8.31□□□□□ -1.08
PBX1-221ENST00000612123 XRCC6P12956 609 aaKnown RBP eCLIP8.31□□□□□ -1.08
PBX1-221ENST00000612123 TTC5Q8N0Z6 440 aa8.31□□□□□ -1.08
PBX1-221ENST00000612123 LRRFIP1Q32MZ4 808 aaKnown RBP8.31□□□□□ -1.08
PBX1-221ENST00000612123 API5Q9BZZ5 524 aaKnown RBP8.31□□□□□ -1.08
PBX1-221ENST00000612123 ZNF330Q9Y3S2 320 aaPredicted RBP8.31□□□□□ -1.08
PBX1-221ENST00000612123 CCDC141Q6ZP82 1450 aa8.31□□□□□ -1.08
PBX1-221ENST00000612123 KDM5BQ9UGL1 1544 aa8.31□□□□□ -1.08
PBX1-221ENST00000612123 HTATSF1O43719 755 aaKnown RBP8.31□□□□□ -1.08
PBX1-221ENST00000612123 HMGB2P26583 209 aaKnown RBP8.31□□□□□ -1.08
PBX1-221ENST00000612123 TCOF1Q13428 1488 aaKnown RBP8.31□□□□□ -1.08
PBX1-221ENST00000612123 ANKLE2Q86XL3 938 aa8.31□□□□□ -1.08
PBX1-221ENST00000612123 CNTLNQ9NXG0 1405 aa8.31□□□□□ -1.08
PBX1-221ENST00000612123 DDX58O95786 925 aaKnown RBP8.3□□□□□ -1.08
PBX1-221ENST00000612123 ZKSCAN2Q63HK3 967 aa8.3□□□□□ -1.08
PBX1-221ENST00000612123 ERCC6L2Q5T890 1561 aa8.3□□□□□ -1.08
PBX1-221ENST00000612123 DAPK1P53355 1430 aa8.3□□□□□ -1.08
PBX1-221ENST00000612123 ZCCHC11Q5TAX3 1644 aaKnown RBP8.3□□□□□ -1.08
PBX1-221ENST00000612123 RAPGEF4Q8WZA2 1011 aa8.3□□□□□ -1.08
PBX1-221ENST00000612123 TSPOAP1O95153 1857 aa8.3□□□□□ -1.08
PBX1-221ENST00000612123 RUNDC1Q96C34 613 aa8.3□□□□□ -1.08
PBX1-221ENST00000612123 TMX1Q9H3N1 280 aa8.3□□□□□ -1.08
PBX1-221ENST00000612123 GNAI1P63096 354 aa8.3□□□□□ -1.08
PBX1-221ENST00000612123 GOLGA6L6A8MZA4 724 aa8.3□□□□□ -1.08
PBX1-221ENST00000612123 CCDC146Q8IYE0 955 aa8.29□□□□□ -1.08
PBX1-221ENST00000612123 PRM3Q9NNZ6 103 aa8.29□□□□□ -1.08
PBX1-221ENST00000612123 PLCB2Q00722 1185 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 PROSER2Q86WR7 435 aaPredicted RBP8.28□□□□□ -1.08
PBX1-221ENST00000612123 CCDC34Q96HJ3 373 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 KCNG1Q9UIX4 513 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 ADCY10Q96PN6 1610 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 BRD4O60885 1362 aaPredicted RBP8.28□□□□□ -1.08
PBX1-221ENST00000612123 KIF3AQ9Y496 699 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 KIF7Q2M1P5 1343 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 PRR29P0C7W0 189 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 CFAP70Q5T0N1 1121 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 SLC4A10Q6U841 1118 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 WWC1Q8IX03 1113 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 PLCH2O75038 1416 aa8.28□□□□□ -1.08
PBX1-221ENST00000612123 KIF16BQ96L93 1317 aa8.27□□□□□ -1.08
PBX1-221ENST00000612123 ABCA8O94911 1581 aa8.27□□□□□ -1.08
PBX1-221ENST00000612123 ATAD2Q6PL18 1390 aa8.27□□□□□ -1.09
PBX1-221ENST00000612123 XPCQ01831 940 aaPredicted RBP8.27□□□□□ -1.09
PBX1-221ENST00000612123 CDK13Q14004 1512 aaKnown RBP8.27□□□□□ -1.09
PBX1-221ENST00000612123 TNNT1P13805 278 aa8.27□□□□□ -1.09
PBX1-221ENST00000612123 NLRP6P59044 892 aa8.27□□□□□ -1.09
PBX1-221ENST00000612123 DDX19BQ9UMR2 479 aa8.27□□□□□ -1.09
PBX1-221ENST00000612123 HSP90B1P14625 803 aaKnown RBP8.27□□□□□ -1.09
PBX1-221ENST00000612123 CHMP3Q9Y3E7 222 aa8.27□□□□□ -1.09
PBX1-221ENST00000612123 PTMAP06454 111 aaKnown RBP8.26□□□□□ -1.09
PBX1-221ENST00000612123 APAF1O14727 1248 aa8.26□□□□□ -1.09
PBX1-221ENST00000612123 GAS2L2Q8NHY3 880 aa8.26□□□□□ -1.09
PBX1-221ENST00000612123 ZNF518AQ6AHZ1 1483 aa8.26□□□□□ -1.09
PBX1-221ENST00000612123 MAGI3Q5TCQ9 1506 aa8.26□□□□□ -1.09
PBX1-221ENST00000612123 GLI2P10070 1586 aa8.26□□□□□ -1.09
PBX1-221ENST00000612123 G3V3G9 751 aa8.26□□□□□ -1.09
PBX1-221ENST00000612123 HSP90AB4PQ58FF6 505 aa8.26□□□□□ -1.09
PBX1-221ENST00000612123 DCAF8Q5TAQ9 597 aa8.26□□□□□ -1.09
PBX1-221ENST00000612123 CENPQQ7L2Z9 268 aaPredicted RBP8.26□□□□□ -1.09
PBX1-221ENST00000612123 RIPK4P57078 832 aa8.26□□□□□ -1.09
PBX1-221ENST00000612123 C20orf194Q5TEA3 1177 aa8.25□□□□□ -1.09
PBX1-221ENST00000612123 GBP4Q96PP9 640 aa8.25□□□□□ -1.09
PBX1-221ENST00000612123 SRCAPQ6ZRS2 3230 aa8.25□□□□□ -1.09
PBX1-221ENST00000612123 SHANK2Q9UPX8 1470 aa8.25□□□□□ -1.09
PBX1-221ENST00000612123 APBB1O00213 710 aa8.25□□□□□ -1.09
PBX1-221ENST00000612123 TMEM51Q9NW97 253 aa8.25□□□□□ -1.09
PBX1-221ENST00000612123 GNL2Q13823 731 aaKnown RBP8.24□□□□□ -1.09
PBX1-221ENST00000612123 TMEM132EQ6IEE7 984 aa8.24□□□□□ -1.09
PBX1-221ENST00000612123 CLUAP1Q96AJ1 413 aa8.24□□□□□ -1.09
PBX1-221ENST00000612123 NUP153P49790 1475 aaKnown RBP8.24□□□□□ -1.09
PBX1-221ENST00000612123 PTPN23Q9H3S7 1636 aa8.24□□□□□ -1.09
PBX1-221ENST00000612123 DNTTIP2Q5QJE6 756 aaKnown RBP8.24□□□□□ -1.09
PBX1-221ENST00000612123 SEC24BO95487 1268 aa8.24□□□□□ -1.09
PBX1-221ENST00000612123 CNPY4Q8N129 248 aa8.24□□□□□ -1.09
PBX1-221ENST00000612123 MYCNP04198 464 aaPredicted RBP8.24□□□□□ -1.09
PBX1-221ENST00000612123 ZFYVE16Q7Z3T8 1539 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms