RNA–Protein interactions for RNA: ENST00000612121.4

LTBP4-233, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 755 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-233ENST00000612121 BCL9LQ86UU0 1499 aa23.69■■□□□ 1.38
LTBP4-233ENST00000612121 CCDC125Q86Z20 511 aa23.69■■□□□ 1.38
LTBP4-233ENST00000612121 VGFO15240 615 aaPredicted RBP23.68■■□□□ 1.38
LTBP4-233ENST00000612121 HFM1A2PYH4 1435 aa23.67■■□□□ 1.38
LTBP4-233ENST00000612121 NPHP3Q7Z494 1330 aa23.64■■□□□ 1.38
LTBP4-233ENST00000612121 PXDNQ92626 1479 aa23.64■■□□□ 1.38
LTBP4-233ENST00000612121 MARF1Q9Y4F3 1742 aaKnown RBP23.64■■□□□ 1.37
LTBP4-233ENST00000612121 GJD4Q96KN9 370 aaPredicted RBP23.63■■□□□ 1.37
LTBP4-233ENST00000612121 ESCO1Q5FWF5 840 aa23.62■■□□□ 1.37
LTBP4-233ENST00000612121 RPGRIP1LQ68CZ1 1315 aa23.6■■□□□ 1.37
LTBP4-233ENST00000612121 CDC42BPGQ6DT37 1551 aa23.6■■□□□ 1.37
LTBP4-233ENST00000612121 FOXO3O43524 673 aa23.59■■□□□ 1.37
LTBP4-233ENST00000612121 XPCQ01831 940 aaPredicted RBP23.59■■□□□ 1.37
LTBP4-233ENST00000612121 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.56■■□□□ 1.36
LTBP4-233ENST00000612121 PPLO60437 1756 aa23.55■■□□□ 1.36
LTBP4-233ENST00000612121 BLMP54132 1417 aaPredicted RBP23.55■■□□□ 1.36
LTBP4-233ENST00000612121 GLI3P10071 1580 aa23.54■■□□□ 1.36
LTBP4-233ENST00000612121 UNC5CLQ8IV45 518 aa23.54■■□□□ 1.36
LTBP4-233ENST00000612121 RALGAPBQ86X10 1494 aa23.54■■□□□ 1.36
LTBP4-233ENST00000612121 SLIT2O94813 1529 aa23.54■■□□□ 1.36
LTBP4-233ENST00000612121 LRPPRCP42704 1394 aaKnown RBP23.53■■□□□ 1.36
LTBP4-233ENST00000612121 NAIPQ13075 1403 aa23.53■■□□□ 1.36
LTBP4-233ENST00000612121 PPARGC1BQ86YN6 1023 aaKnown RBP23.51■■□□□ 1.35
LTBP4-233ENST00000612121 NUTM2FA1L443 756 aa23.5■■□□□ 1.35
LTBP4-233ENST00000612121 WAPLQ7Z5K2 1190 aa23.49■■□□□ 1.35
LTBP4-233ENST00000612121 DEFB132Q7Z7B7 95 aa23.49■■□□□ 1.35
LTBP4-233ENST00000612121 SPATA31A3Q5VYP0 1347 aa23.49■■□□□ 1.35
LTBP4-233ENST00000612121 BRWD3Q6RI45 1802 aa23.49■■□□□ 1.35
LTBP4-233ENST00000612121 TECPR2O15040 1411 aa23.49■■□□□ 1.35
LTBP4-233ENST00000612121 ADGRF5Q8IZF2 1346 aa23.46■■□□□ 1.35
LTBP4-233ENST00000612121 STK26Q9P289 416 aa23.45■■□□□ 1.34
LTBP4-233ENST00000612121 USP32Q8NFA0 1604 aa23.44■■□□□ 1.34
LTBP4-233ENST00000612121 SEPT12Q8IYM1 358 aa23.44■■□□□ 1.34
LTBP4-233ENST00000612121 ABCC11Q96J66 1382 aa23.43■■□□□ 1.34
LTBP4-233ENST00000612121 PLEKHH1Q9ULM0 1364 aa23.43■■□□□ 1.34
LTBP4-233ENST00000612121 SLC4A1APQ9BWU0 796 aaKnown RBP23.43■■□□□ 1.34
LTBP4-233ENST00000612121 CCDC144AA2RUR9 1427 aa23.42■■□□□ 1.34
LTBP4-233ENST00000612121 RRBP1Q9P2E9 1410 aaKnown RBP23.42■■□□□ 1.34
LTBP4-233ENST00000612121 FMN2Q9NZ56 1722 aa23.42■■□□□ 1.34
LTBP4-233ENST00000612121 ONECUT3O60422 494 aaPredicted RBP23.42■■□□□ 1.34
LTBP4-233ENST00000612121 SF3B2Q13435 895 aaKnown RBP23.42■■□□□ 1.34
LTBP4-233ENST00000612121 KRT28Q7Z3Y7 464 aa23.42■■□□□ 1.34
LTBP4-233ENST00000612121 KIF1AQ12756 1690 aa23.41■■□□□ 1.34
LTBP4-233ENST00000612121 LRP5O75197 1615 aa23.41■■□□□ 1.34
LTBP4-233ENST00000612121 VPS72Q15906 364 aa23.41■■□□□ 1.34
LTBP4-233ENST00000612121 KNDC1Q76NI1 1749 aa23.39■■□□□ 1.34
LTBP4-233ENST00000612121 TMEM132EQ6IEE7 984 aa23.39■■□□□ 1.33
LTBP4-233ENST00000612121 TNS3Q68CZ2 1445 aa23.37■■□□□ 1.33
LTBP4-233ENST00000612121 KRT27Q7Z3Y8 459 aa23.37■■□□□ 1.33
LTBP4-233ENST00000612121 CABLES1Q8TDN4 633 aa23.37■■□□□ 1.33
LTBP4-233ENST00000612121 NWD2Q9ULI1 1742 aa23.36■■□□□ 1.33
LTBP4-233ENST00000612121 PLCH1Q4KWH8 1693 aa23.35■■□□□ 1.33
LTBP4-233ENST00000612121 SPATA31E1Q6ZUB1 1445 aa23.35■■□□□ 1.33
LTBP4-233ENST00000612121 HAP1P54257 671 aaPredicted RBP23.35■■□□□ 1.33
LTBP4-233ENST00000612121 RGL3Q3MIN7 710 aa23.35■■□□□ 1.33
LTBP4-233ENST00000612121 ANKRD30BQ9BXX2 1392 aa23.35■■□□□ 1.33
LTBP4-233ENST00000612121 IFT172Q9UG01 1749 aa23.34■■□□□ 1.33
LTBP4-233ENST00000612121 PHF8Q9UPP1 1060 aa23.34■■□□□ 1.33
LTBP4-233ENST00000612121 RGPD8O14715 1765 aaPredicted RBP23.34■■□□□ 1.33
LTBP4-233ENST00000612121 YTHDC2Q9H6S0 1430 aaKnown RBP23.33■■□□□ 1.33
LTBP4-233ENST00000612121 PSME1Q06323 249 aa23.33■■□□□ 1.33
LTBP4-233ENST00000612121 CCDC9Q9Y3X0 531 aaKnown RBP23.33■■□□□ 1.33
LTBP4-233ENST00000612121 PIK3C2GO75747 1445 aa23.33■■□□□ 1.32
LTBP4-233ENST00000612121 SIRT1Q96EB6 747 aa23.32■■□□□ 1.32
LTBP4-233ENST00000612121 SBNO1A3KN83 1393 aa23.31■■□□□ 1.32
LTBP4-233ENST00000612121 ABCA3Q99758 1704 aa23.3■■□□□ 1.32
LTBP4-233ENST00000612121 PSDA5PKW4 1024 aaPredicted RBP23.3■■□□□ 1.32
LTBP4-233ENST00000612121 FAM83GA6ND36 823 aa23.3■■□□□ 1.32
LTBP4-233ENST00000612121 PLEKHG5O94827 1062 aa23.3■■□□□ 1.32
LTBP4-233ENST00000612121 HRCP23327 699 aa23.3■■□□□ 1.32
LTBP4-233ENST00000612121 BAG6P46379 1132 aa23.29■■□□□ 1.32
LTBP4-233ENST00000612121 NRXN1Q9ULB1 1477 aa23.29■■□□□ 1.32
LTBP4-233ENST00000612121 ARHGEF10O15013 1369 aa23.27■■□□□ 1.32
LTBP4-233ENST00000612121 LMOD2Q6P5Q4 547 aa23.27■■□□□ 1.32
LTBP4-233ENST00000612121 NRAPQ86VF7 1730 aa23.25■■□□□ 1.31
LTBP4-233ENST00000612121 A0A0G2JS52 829 aa23.24■■□□□ 1.31
LTBP4-233ENST00000612121 MYT1Q01538 1121 aa23.24■■□□□ 1.31
LTBP4-233ENST00000612121 FAM98CQ17RN3 349 aaKnown RBP23.24■■□□□ 1.31
LTBP4-233ENST00000612121 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
LTBP4-233ENST00000612121 EN1Q05925 392 aaPredicted RBP23.21■■□□□ 1.31
LTBP4-233ENST00000612121 BTG4Q9NY30 223 aa23.21■■□□□ 1.31
LTBP4-233ENST00000612121 PMFBP1Q8TBY8 1022 aa23.2■■□□□ 1.3
LTBP4-233ENST00000612121 DHX57Q6P158 1386 aaKnown RBP23.19■■□□□ 1.3
LTBP4-233ENST00000612121 PRAM1Q96QH2 718 aa23.19■■□□□ 1.3
LTBP4-233ENST00000612121 RGPD1P0DJD0 1748 aa23.19■■□□□ 1.3
LTBP4-233ENST00000612121 SAFB2Q14151 953 aaKnown RBP eCLIP23.18■■□□□ 1.3
LTBP4-233ENST00000612121 CFAP70Q5T0N1 1121 aa23.18■■□□□ 1.3
LTBP4-233ENST00000612121 MPHOSPH9Q99550 1183 aa23.18■■□□□ 1.3
LTBP4-233ENST00000612121 ANKARQ7Z5J8 1434 aa23.17■■□□□ 1.3
LTBP4-233ENST00000612121 TRPM3Q9HCF6 1732 aaPredicted RBP23.17■■□□□ 1.3
LTBP4-233ENST00000612121 FAM182BQ5T319 152 aa23.17■■□□□ 1.3
LTBP4-233ENST00000612121 COL14A1Q05707 1796 aaKnown RBP23.17■■□□□ 1.3
LTBP4-233ENST00000612121 R3HDM1Q15032 1099 aaKnown RBP23.16■■□□□ 1.3
LTBP4-233ENST00000612121 DISP2A7MBM2 1401 aa23.16■■□□□ 1.3
LTBP4-233ENST00000612121 SPATA31A5Q5VU36 1347 aa23.15■■□□□ 1.3
LTBP4-233ENST00000612121 SPATA31A7Q8IWB4 1347 aa23.15■■□□□ 1.3
LTBP4-233ENST00000612121 ALS2Q96Q42 1657 aa23.14■■□□□ 1.29
LTBP4-233ENST00000612121 TNS1Q9HBL0 1735 aaKnown RBP23.13■■□□□ 1.29
LTBP4-233ENST00000612121 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
LTBP4-233ENST00000612121 THSD7AQ9UPZ6 1657 aa23.13■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms