RNA–Protein interactions for RNA: ENST00000610733.1

TPM1-233, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 3,957 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-233ENST00000610733 CALD1Q05682 793 aaKnown RBP11.92□□□□□ -0.5
TPM1-233ENST00000610733 NSD3Q9BZ95 1437 aa11.92□□□□□ -0.5
TPM1-233ENST00000610733 MAGI1Q96QZ7 1491 aaPredicted RBP11.92□□□□□ -0.5
TPM1-233ENST00000610733 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
TPM1-233ENST00000610733 CASC1Q6TDU7 716 aa11.92□□□□□ -0.5
TPM1-233ENST00000610733 LAMC3Q9Y6N6 1575 aa11.91□□□□□ -0.5
TPM1-233ENST00000610733 KDM5BQ9UGL1 1544 aa11.91□□□□□ -0.5
TPM1-233ENST00000610733 EVC2Q86UK5 1308 aa11.91□□□□□ -0.5
TPM1-233ENST00000610733 CTTNBP2Q8WZ74 1663 aa11.91□□□□□ -0.5
TPM1-233ENST00000610733 TRIM27P14373 513 aa11.91□□□□□ -0.5
TPM1-233ENST00000610733 TERF2IPQ9NYB0 399 aa11.91□□□□□ -0.5
TPM1-233ENST00000610733 FAM13BQ9NYF5 915 aa11.91□□□□□ -0.5
TPM1-233ENST00000610733 DTNBO60941 627 aa11.91□□□□□ -0.5
TPM1-233ENST00000610733 CAVIN1Q6NZI2 390 aaKnown RBP11.91□□□□□ -0.5
TPM1-233ENST00000610733 MIS18AQ9NYP9 233 aa11.9□□□□□ -0.5
TPM1-233ENST00000610733 TCOF1Q13428 1488 aaKnown RBP11.9□□□□□ -0.5
TPM1-233ENST00000610733 RALGAPBQ86X10 1494 aa11.9□□□□□ -0.5
TPM1-233ENST00000610733 PRAG1Q86YV5 1406 aa11.9□□□□□ -0.5
TPM1-233ENST00000610733 OS9Q13438 667 aaPredicted RBP11.9□□□□□ -0.5
TPM1-233ENST00000610733 KDM2BQ8NHM5 1336 aa11.9□□□□□ -0.5
TPM1-233ENST00000610733 RAPGEF3O95398 923 aa11.9□□□□□ -0.5
TPM1-233ENST00000610733 ATF7IPQ6VMQ6 1270 aa11.9□□□□□ -0.5
TPM1-233ENST00000610733 PRAM1Q96QH2 718 aa11.9□□□□□ -0.5
TPM1-233ENST00000610733 CABP1Q9NZU7 370 aa11.89□□□□□ -0.51
TPM1-233ENST00000610733 RRS1Q15050 365 aaKnown RBP11.89□□□□□ -0.51
TPM1-233ENST00000610733 NUTM2GQ5VZR2 741 aa11.89□□□□□ -0.51
TPM1-233ENST00000610733 CCDC9Q9Y3X0 531 aaKnown RBP11.89□□□□□ -0.51
TPM1-233ENST00000610733 NKTRP30414 1462 aaKnown RBP11.89□□□□□ -0.51
TPM1-233ENST00000610733 SMARCA5O60264 1052 aaPredicted RBP11.88□□□□□ -0.51
TPM1-233ENST00000610733 XRCC6P12956 609 aaKnown RBP eCLIP11.88□□□□□ -0.51
TPM1-233ENST00000610733 RRAGDQ9NQL2 400 aaPredicted RBP11.88□□□□□ -0.51
TPM1-233ENST00000610733 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
TPM1-233ENST00000610733 TSHZ3Q63HK5 1081 aa11.88□□□□□ -0.51
TPM1-233ENST00000610733 SYNJ2O15056 1496 aa11.88□□□□□ -0.51
TPM1-233ENST00000610733 NAP1L2Q9ULW6 460 aaPredicted RBP11.87□□□□□ -0.51
TPM1-233ENST00000610733 GRIN2AQ12879 1464 aa11.87□□□□□ -0.51
TPM1-233ENST00000610733 TMPOP42166 694 aaKnown RBP11.87□□□□□ -0.51
TPM1-233ENST00000610733 BCORL1Q5H9F3 1711 aa11.87□□□□□ -0.51
TPM1-233ENST00000610733 KCNJ4P48050 445 aa11.87□□□□□ -0.51
TPM1-233ENST00000610733 FAM43AQ8N2R8 423 aa11.87□□□□□ -0.51
TPM1-233ENST00000610733 FAM83GA6ND36 823 aa11.86□□□□□ -0.51
TPM1-233ENST00000610733 GRPEL1Q9HAV7 217 aa11.86□□□□□ -0.51
TPM1-233ENST00000610733 PRPF40AO75400 957 aaKnown RBP11.86□□□□□ -0.51
TPM1-233ENST00000610733 ATP10BO94823 1461 aa11.86□□□□□ -0.51
TPM1-233ENST00000610733 MRC2Q9UBG0 1479 aa11.86□□□□□ -0.51
TPM1-233ENST00000610733 SSFA2P28290 1259 aa11.86□□□□□ -0.51
TPM1-233ENST00000610733 LARP6Q9BRS8 491 aaKnown RBP11.86□□□□□ -0.51
TPM1-233ENST00000610733 TBC1D32Q96NH3 1257 aa11.86□□□□□ -0.51
TPM1-233ENST00000610733 WDR62O43379 1518 aa11.85□□□□□ -0.51
TPM1-233ENST00000610733 GPRASP1Q5JY77 1395 aa11.85□□□□□ -0.51
TPM1-233ENST00000610733 WAPLQ7Z5K2 1190 aa11.85□□□□□ -0.51
TPM1-233ENST00000610733 R3HCC1Q9Y3T6 440 aaKnown RBP11.85□□□□□ -0.51
TPM1-233ENST00000610733 RTF1Q92541 710 aaKnown RBP11.85□□□□□ -0.51
TPM1-233ENST00000610733 CCDC141Q6ZP82 1450 aa11.85□□□□□ -0.51
TPM1-233ENST00000610733 NASPP49321 788 aaPredicted RBP11.85□□□□□ -0.51
TPM1-233ENST00000610733 ANO2Q9NQ90 1003 aa11.85□□□□□ -0.51
TPM1-233ENST00000610733 MAP4K4O95819 1239 aaPredicted RBP11.84□□□□□ -0.51
TPM1-233ENST00000610733 CHD1LQ86WJ1 897 aa11.84□□□□□ -0.51
TPM1-233ENST00000610733 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
TPM1-233ENST00000610733 TNPO1Q92973 898 aaKnown RBP11.84□□□□□ -0.51
TPM1-233ENST00000610733 CHAMP1Q96JM3 812 aa11.84□□□□□ -0.51
TPM1-233ENST00000610733 KIF14Q15058 1648 aa11.84□□□□□ -0.51
TPM1-233ENST00000610733 MRE11P49959 708 aa11.83□□□□□ -0.52
TPM1-233ENST00000610733 KRT24Q2M2I5 525 aa11.83□□□□□ -0.52
TPM1-233ENST00000610733 C16orf71Q8IYS4 520 aaPredicted RBP11.83□□□□□ -0.52
TPM1-233ENST00000610733 EIF2S2P20042 333 aaKnown RBP11.83□□□□□ -0.52
TPM1-233ENST00000610733 EMILIN1Q9Y6C2 1016 aa11.83□□□□□ -0.52
TPM1-233ENST00000610733 TWISTNBQ3B726 338 aaPredicted RBP11.82□□□□□ -0.52
TPM1-233ENST00000610733 ESPNB1AK53 854 aa11.82□□□□□ -0.52
TPM1-233ENST00000610733 FGD1P98174 961 aa11.82□□□□□ -0.52
TPM1-233ENST00000610733 DDX54Q8TDD1 881 aaKnown RBP11.82□□□□□ -0.52
TPM1-233ENST00000610733 ATAD2Q6PL18 1390 aa11.82□□□□□ -0.52
TPM1-233ENST00000610733 A2MP01023 1474 aa11.82□□□□□ -0.52
TPM1-233ENST00000610733 A0A0G2JS52 829 aa11.82□□□□□ -0.52
TPM1-233ENST00000610733 DISP1Q96F81 1524 aa11.82□□□□□ -0.52
TPM1-233ENST00000610733 FAM135AQ9P2D6 1515 aa11.81□□□□□ -0.52
TPM1-233ENST00000610733 NEK4P51957 841 aa11.81□□□□□ -0.52
TPM1-233ENST00000610733 GDPD2Q9HCC8 539 aa11.81□□□□□ -0.52
TPM1-233ENST00000610733 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
TPM1-233ENST00000610733 CCDC27Q2M243 656 aa11.81□□□□□ -0.52
TPM1-233ENST00000610733 TXNDC2Q86VQ3 553 aa11.81□□□□□ -0.52
TPM1-233ENST00000610733 TSPYL6Q8N831 410 aa11.81□□□□□ -0.52
TPM1-233ENST00000610733 MCM10Q7L590 875 aa11.8□□□□□ -0.52
TPM1-233ENST00000610733 WDR63Q8IWG1 891 aa11.8□□□□□ -0.52
TPM1-233ENST00000610733 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.8□□□□□ -0.52
TPM1-233ENST00000610733 IFT140Q96RY7 1462 aa11.8□□□□□ -0.52
TPM1-233ENST00000610733 KIF16BQ96L93 1317 aa11.8□□□□□ -0.52
TPM1-233ENST00000610733 F6X3S4 739 aa11.8□□□□□ -0.52
TPM1-233ENST00000610733 RBM27Q9P2N5 1060 aaKnown RBP11.8□□□□□ -0.52
TPM1-233ENST00000610733 RAPGEF6Q8TEU7 1601 aa11.8□□□□□ -0.52
TPM1-233ENST00000610733 ST18O60284 1047 aa11.8□□□□□ -0.52
TPM1-233ENST00000610733 UPF3BQ9BZI7 483 aaKnown RBP11.8□□□□□ -0.52
TPM1-233ENST00000610733 MAGI2Q86UL8 1455 aa11.79□□□□□ -0.52
TPM1-233ENST00000610733 CDK19Q9BWU1 502 aa11.79□□□□□ -0.52
TPM1-233ENST00000610733 EXOC6BQ9Y2D4 811 aa11.79□□□□□ -0.52
TPM1-233ENST00000610733 SYCP2Q9BX26 1530 aa11.79□□□□□ -0.52
TPM1-233ENST00000610733 DNMT1P26358 1616 aaKnown RBP11.79□□□□□ -0.52
TPM1-233ENST00000610733 FKBP5Q13451 457 aaPredicted RBP11.79□□□□□ -0.52
TPM1-233ENST00000610733 SULT6B1Q6IMI4 303 aa11.79□□□□□ -0.52
TPM1-233ENST00000610733 COG3Q96JB2 828 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms