RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 POLR3AO14802 1390 aaPredicted RBP15.87■□□□□ 0.13
USP6NL-206ENST00000609853 ANKRD36BQ8N2N9 1353 aa15.87■□□□□ 0.13
USP6NL-206ENST00000609853 NSD3Q9BZ95 1437 aa15.87■□□□□ 0.13
USP6NL-206ENST00000609853 YTHDC2Q9H6S0 1430 aaKnown RBP15.87■□□□□ 0.13
USP6NL-206ENST00000609853 PTPRMP28827 1452 aa15.86■□□□□ 0.13
USP6NL-206ENST00000609853 ESF1Q9H501 851 aaKnown RBP15.86■□□□□ 0.13
USP6NL-206ENST00000609853 CGNL1Q0VF96 1302 aa15.85■□□□□ 0.13
USP6NL-206ENST00000609853 SLC12A5Q9H2X9 1139 aa15.85■□□□□ 0.13
USP6NL-206ENST00000609853 RCAN3Q9UKA8 241 aa15.85■□□□□ 0.13
USP6NL-206ENST00000609853 DLC1Q96QB1 1528 aa15.84■□□□□ 0.13
USP6NL-206ENST00000609853 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.84■□□□□ 0.13
USP6NL-206ENST00000609853 ATAD2Q6PL18 1390 aa15.84■□□□□ 0.13
USP6NL-206ENST00000609853 RIMS2Q9UQ26 1411 aa15.83■□□□□ 0.13
USP6NL-206ENST00000609853 ZMYM3Q14202 1370 aa15.83■□□□□ 0.12
USP6NL-206ENST00000609853 HDGFP51858 240 aaKnown RBP15.82■□□□□ 0.12
USP6NL-206ENST00000609853 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
USP6NL-206ENST00000609853 RRP1P56182 461 aaKnown RBP15.81■□□□□ 0.12
USP6NL-206ENST00000609853 POGKQ9P215 609 aa15.8■□□□□ 0.12
USP6NL-206ENST00000609853 SALL2Q9Y467 1007 aaPredicted RBP15.8■□□□□ 0.12
USP6NL-206ENST00000609853 SETD1AO15047 1707 aaKnown RBP15.8■□□□□ 0.12
USP6NL-206ENST00000609853 ZNF521Q96K83 1311 aa15.8■□□□□ 0.12
USP6NL-206ENST00000609853 MLECQ14165 292 aa15.8■□□□□ 0.12
USP6NL-206ENST00000609853 STK26Q9P289 416 aa15.8■□□□□ 0.12
USP6NL-206ENST00000609853 PRAM1Q96QH2 718 aa15.79■□□□□ 0.12
USP6NL-206ENST00000609853 TERF2IPQ9NYB0 399 aa15.78■□□□□ 0.12
USP6NL-206ENST00000609853 ABCC11Q96J66 1382 aa15.78■□□□□ 0.12
USP6NL-206ENST00000609853 SENP3-EIF4A1A0A087X0R7 540 aa15.77■□□□□ 0.12
USP6NL-206ENST00000609853 SRPK2P78362 688 aaKnown RBP15.77■□□□□ 0.12
USP6NL-206ENST00000609853 GOLGA2Q08379 1002 aa15.77■□□□□ 0.12
USP6NL-206ENST00000609853 CDCA7LQ96GN5 454 aa15.77■□□□□ 0.12
USP6NL-206ENST00000609853 CABP2Q9NPB3 220 aa15.77■□□□□ 0.12
USP6NL-206ENST00000609853 MED14O60244 1454 aa15.77■□□□□ 0.11
USP6NL-206ENST00000609853 CFAP53Q96M91 514 aa15.77■□□□□ 0.11
USP6NL-206ENST00000609853 TNRQ92752 1358 aa15.76■□□□□ 0.11
USP6NL-206ENST00000609853 B4GALNT3Q6L9W6 998 aa15.76■□□□□ 0.11
USP6NL-206ENST00000609853 PLEKHH1Q9ULM0 1364 aa15.76■□□□□ 0.11
USP6NL-206ENST00000609853 SIRT1Q96EB6 747 aa15.75■□□□□ 0.11
USP6NL-206ENST00000609853 ANKRD26Q9UPS8 1709 aa15.75■□□□□ 0.11
USP6NL-206ENST00000609853 SHPRHQ149N8 1683 aa15.75■□□□□ 0.11
USP6NL-206ENST00000609853 NCBP3Q53F19 620 aaKnown RBP15.74■□□□□ 0.11
USP6NL-206ENST00000609853 CCDC136Q96JN2 1154 aa15.74■□□□□ 0.11
USP6NL-206ENST00000609853 NRXN3Q9Y4C0 1643 aa15.74■□□□□ 0.11
USP6NL-206ENST00000609853 KNDC1Q76NI1 1749 aa15.74■□□□□ 0.11
USP6NL-206ENST00000609853 A0A1W2PP64 1363 aa15.74■□□□□ 0.11
USP6NL-206ENST00000609853 SAFB2Q14151 953 aaKnown RBP eCLIP15.74■□□□□ 0.11
USP6NL-206ENST00000609853 MINK1Q8N4C8 1332 aaPredicted RBP15.73■□□□□ 0.11
USP6NL-206ENST00000609853 UBR1Q8IWV7 1749 aa15.72■□□□□ 0.11
USP6NL-206ENST00000609853 DUSP27Q5VZP5 1158 aa15.72■□□□□ 0.11
USP6NL-206ENST00000609853 HDGFL2Q7Z4V5 671 aaPredicted RBP15.72■□□□□ 0.11
USP6NL-206ENST00000609853 TRMT2AQ8IZ69 625 aaKnown RBP15.72■□□□□ 0.11
USP6NL-206ENST00000609853 NLRP1Q9C000 1473 aa15.72■□□□□ 0.11
USP6NL-206ENST00000609853 SLFN5Q08AF3 891 aa15.71■□□□□ 0.11
USP6NL-206ENST00000609853 CDK19Q9BWU1 502 aa15.71■□□□□ 0.11
USP6NL-206ENST00000609853 TECPR2O15040 1411 aa15.71■□□□□ 0.11
USP6NL-206ENST00000609853 FAM135BQ49AJ0 1406 aa15.71■□□□□ 0.11
USP6NL-206ENST00000609853 E9PSI1 815 aa15.71■□□□□ 0.1
USP6NL-206ENST00000609853 APAF1O14727 1248 aa15.71■□□□□ 0.1
USP6NL-206ENST00000609853 ATP7BP35670 1465 aa15.7■□□□□ 0.1
USP6NL-206ENST00000609853 CD163L1Q9NR16 1453 aa15.7■□□□□ 0.1
USP6NL-206ENST00000609853 TMEM2Q9UHN6 1383 aa15.7■□□□□ 0.1
USP6NL-206ENST00000609853 MTHFSP49914 203 aa15.7■□□□□ 0.1
USP6NL-206ENST00000609853 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
USP6NL-206ENST00000609853 CCDC146Q8IYE0 955 aa15.69■□□□□ 0.1
USP6NL-206ENST00000609853 RBM19Q9Y4C8 960 aaKnown RBP15.69■□□□□ 0.1
USP6NL-206ENST00000609853 KIF20BQ96Q89 1820 aa15.68■□□□□ 0.1
USP6NL-206ENST00000609853 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.68■□□□□ 0.1
USP6NL-206ENST00000609853 NKTRP30414 1462 aaKnown RBP15.67■□□□□ 0.1
USP6NL-206ENST00000609853 CPS1P31327 1500 aa15.67■□□□□ 0.1
USP6NL-206ENST00000609853 TNNT2P45379 298 aaPredicted RBP15.66■□□□□ 0.1
USP6NL-206ENST00000609853 CCDC27Q2M243 656 aa15.65■□□□□ 0.1
USP6NL-206ENST00000609853 FYB1O15117 783 aa15.65■□□□□ 0.1
USP6NL-206ENST00000609853 METP08581 1390 aa15.65■□□□□ 0.1
USP6NL-206ENST00000609853 IQSEC2Q5JU85 1478 aa15.65■□□□□ 0.1
USP6NL-206ENST00000609853 PLEKHG1Q9ULL1 1385 aa15.64■□□□□ 0.09
USP6NL-206ENST00000609853 EXOC6Q8TAG9 804 aa15.64■□□□□ 0.09
USP6NL-206ENST00000609853 CABP1Q9NZU7 370 aa15.64■□□□□ 0.09
USP6NL-206ENST00000609853 WASLO00401 505 aaPredicted RBP15.63■□□□□ 0.09
USP6NL-206ENST00000609853 WAPLQ7Z5K2 1190 aa15.63■□□□□ 0.09
USP6NL-206ENST00000609853 WDR63Q8IWG1 891 aa15.63■□□□□ 0.09
USP6NL-206ENST00000609853 WWC1Q8IX03 1113 aa15.63■□□□□ 0.09
USP6NL-206ENST00000609853 C3P01024 1663 aa15.62■□□□□ 0.09
USP6NL-206ENST00000609853 FER1L4A9Z1Z3 1794 aa15.61■□□□□ 0.09
USP6NL-206ENST00000609853 TCP11L2Q8N4U5 519 aa15.61■□□□□ 0.09
USP6NL-206ENST00000609853 PNNQ9H307 717 aaKnown RBP15.61■□□□□ 0.09
USP6NL-206ENST00000609853 GGNBP2Q9H3C7 697 aa15.61■□□□□ 0.09
USP6NL-206ENST00000609853 COL3A1P02461 1466 aaPredicted RBP15.61■□□□□ 0.09
USP6NL-206ENST00000609853 CPSF1Q10570 1443 aaKnown RBP15.61■□□□□ 0.09
USP6NL-206ENST00000609853 EDC4Q6P2E9 1401 aaKnown RBP15.61■□□□□ 0.09
USP6NL-206ENST00000609853 ADGRB2O60241 1585 aa15.6■□□□□ 0.09
USP6NL-206ENST00000609853 SLIT1O75093 1534 aa15.6■□□□□ 0.09
USP6NL-206ENST00000609853 ADAMTS13Q76LX8 1427 aa15.6■□□□□ 0.09
USP6NL-206ENST00000609853 PNPLA6Q8IY17 1366 aa15.6■□□□□ 0.09
USP6NL-206ENST00000609853 EID1Q9Y6B2 187 aa15.6■□□□□ 0.09
USP6NL-206ENST00000609853 CDC42BPGQ6DT37 1551 aa15.59■□□□□ 0.09
USP6NL-206ENST00000609853 U2AF1L5P0DN76 240 aaPredicted RBP15.59■□□□□ 0.09
USP6NL-206ENST00000609853 U2AF1Q01081 240 aaKnown RBP eCLIP15.59■□□□□ 0.09
USP6NL-206ENST00000609853 ARHGAP23Q9P227 1491 aa15.58■□□□□ 0.09
USP6NL-206ENST00000609853 PPIP5K1Q6PFW1 1433 aa15.58■□□□□ 0.08
USP6NL-206ENST00000609853 TXNDC2Q86VQ3 553 aa15.58■□□□□ 0.08
USP6NL-206ENST00000609853 CCDC61Q9Y6R9 512 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms