RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 RSPH6AQ9H0K4 717 aa28.59■■■□□ 2.17
SHANK2-220ENST00000608988 RARSP54136 660 aaKnown RBP28.59■■■□□ 2.17
SHANK2-220ENST00000608988 PANK1Q8TE04 598 aa28.59■■■□□ 2.17
SHANK2-220ENST00000608988 TBC1D32Q96NH3 1257 aa28.58■■■□□ 2.17
SHANK2-220ENST00000608988 ATP7AQ04656 1500 aa28.57■■■□□ 2.16
SHANK2-220ENST00000608988 ANTXR1Q9H6X2 564 aa28.57■■■□□ 2.16
SHANK2-220ENST00000608988 RWDD1Q9H446 243 aaPredicted RBP28.56■■■□□ 2.16
SHANK2-220ENST00000608988 ERCC6L2Q5T890 1561 aa28.56■■■□□ 2.16
SHANK2-220ENST00000608988 SEC24BO95487 1268 aa28.55■■■□□ 2.16
SHANK2-220ENST00000608988 ZC3H13Q5T200 1668 aaKnown RBP28.54■■■□□ 2.16
SHANK2-220ENST00000608988 ADGRL1O94910 1474 aa28.53■■■□□ 2.16
SHANK2-220ENST00000608988 CFAP70Q5T0N1 1121 aa28.53■■■□□ 2.16
SHANK2-220ENST00000608988 EFCAB6Q5THR3 1501 aa28.52■■■□□ 2.16
SHANK2-220ENST00000608988 MROH1Q8NDA8 1641 aa28.52■■■□□ 2.16
SHANK2-220ENST00000608988 CT47B1P0C2W7 299 aaPredicted RBP28.51■■■□□ 2.15
SHANK2-220ENST00000608988 NSD3Q9BZ95 1437 aa28.5■■■□□ 2.15
SHANK2-220ENST00000608988 MORC1Q86VD1 984 aa28.5■■■□□ 2.15
SHANK2-220ENST00000608988 FANCAO15360 1455 aa28.5■■■□□ 2.15
SHANK2-220ENST00000608988 LMTK2Q8IWU2 1503 aa28.49■■■□□ 2.15
SHANK2-220ENST00000608988 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.49■■■□□ 2.15
SHANK2-220ENST00000608988 ZNF518AQ6AHZ1 1483 aa28.49■■■□□ 2.15
SHANK2-220ENST00000608988 ABCA9Q8IUA7 1624 aa28.49■■■□□ 2.15
SHANK2-220ENST00000608988 MYH16Q9H6N6 1097 aa28.49■■■□□ 2.15
SHANK2-220ENST00000608988 POGKQ9P215 609 aa28.49■■■□□ 2.15
SHANK2-220ENST00000608988 PDZRN3Q9UPQ7 1066 aa28.48■■■□□ 2.15
SHANK2-220ENST00000608988 PCDHB15Q9Y5E8 787 aa28.47■■■□□ 2.15
SHANK2-220ENST00000608988 ADGRF5Q8IZF2 1346 aa28.47■■■□□ 2.15
SHANK2-220ENST00000608988 ADGRB3O60242 1522 aa28.47■■■□□ 2.15
SHANK2-220ENST00000608988 OSCARQ8IYS5 282 aa28.46■■■□□ 2.15
SHANK2-220ENST00000608988 CFAP53Q96M91 514 aa28.46■■■□□ 2.15
SHANK2-220ENST00000608988 PUS7Q96PZ0 661 aaKnown RBP28.46■■■□□ 2.15
SHANK2-220ENST00000608988 TCP11L2Q8N4U5 519 aa28.46■■■□□ 2.15
SHANK2-220ENST00000608988 NSD2O96028 1365 aa28.45■■■□□ 2.14
SHANK2-220ENST00000608988 MROH2AA6NES4 1674 aa28.45■■■□□ 2.14
SHANK2-220ENST00000608988 AFAP1Q8N556 730 aa28.44■■■□□ 2.14
SHANK2-220ENST00000608988 TBC1D2Q9BYX2 928 aa28.44■■■□□ 2.14
SHANK2-220ENST00000608988 ADGRB2O60241 1585 aa28.44■■■□□ 2.14
SHANK2-220ENST00000608988 QRICH2Q9H0J4 1663 aa28.44■■■□□ 2.14
SHANK2-220ENST00000608988 SLKQ9H2G2 1235 aaPredicted RBP28.43■■■□□ 2.14
SHANK2-220ENST00000608988 MVPQ14764 893 aaKnown RBP28.41■■■□□ 2.14
SHANK2-220ENST00000608988 UGGT1Q9NYU2 1555 aa28.4■■■□□ 2.14
SHANK2-220ENST00000608988 RLBP1P12271 317 aa28.4■■■□□ 2.14
SHANK2-220ENST00000608988 KIF3BO15066 747 aa28.38■■■□□ 2.13
SHANK2-220ENST00000608988 ZKSCAN2Q63HK3 967 aa28.38■■■□□ 2.13
SHANK2-220ENST00000608988 PPRC1Q5VV67 1664 aaKnown RBP28.38■■■□□ 2.13
SHANK2-220ENST00000608988 PPLO60437 1756 aa28.36■■■□□ 2.13
SHANK2-220ENST00000608988 CHMP5Q9NZZ3 219 aa28.36■■■□□ 2.13
SHANK2-220ENST00000608988 FSD2A1L4K1 749 aa28.36■■■□□ 2.13
SHANK2-220ENST00000608988 ADGRB1O14514 1584 aa28.36■■■□□ 2.13
SHANK2-220ENST00000608988 HDAC1Q13547 482 aaPredicted RBP28.35■■■□□ 2.13
SHANK2-220ENST00000608988 MCM4P33991 863 aa28.34■■■□□ 2.13
SHANK2-220ENST00000608988 NOS1P29475 1434 aa28.33■■■□□ 2.13
SHANK2-220ENST00000608988 GOLGA6L3A6NEY3 463 aa28.33■■■□□ 2.13
SHANK2-220ENST00000608988 DZIP1LQ8IYY4 767 aaKnown RBP28.33■■■□□ 2.13
SHANK2-220ENST00000608988 UBE2Q2Q8WVN8 375 aa28.33■■■□□ 2.13
SHANK2-220ENST00000608988 C14orf93Q9H972 538 aaKnown RBP28.32■■■□□ 2.12
SHANK2-220ENST00000608988 RRP7AQ9Y3A4 280 aaKnown RBP28.32■■■□□ 2.12
SHANK2-220ENST00000608988 RPGRIP1LQ68CZ1 1315 aa28.32■■■□□ 2.12
SHANK2-220ENST00000608988 ISY1Q9ULR0 285 aaKnown RBP28.32■■■□□ 2.12
SHANK2-220ENST00000608988 NEUROD2Q15784 382 aa28.31■■■□□ 2.12
SHANK2-220ENST00000608988 MTHFSP49914 203 aa28.3■■■□□ 2.12
SHANK2-220ENST00000608988 C22orf23Q9BZE7 217 aa28.3■■■□□ 2.12
SHANK2-220ENST00000608988 FTSJ3Q8IY81 847 aaKnown RBP28.29■■■□□ 2.12
SHANK2-220ENST00000608988 ANKRD36BQ8N2N9 1353 aa28.29■■■□□ 2.12
SHANK2-220ENST00000608988 DDX19BQ9UMR2 479 aa28.27■■■□□ 2.12
SHANK2-220ENST00000608988 ABCC11Q96J66 1382 aa28.27■■■□□ 2.12
SHANK2-220ENST00000608988 SLC12A5Q9H2X9 1139 aa28.27■■■□□ 2.12
SHANK2-220ENST00000608988 TNNQ9UQP3 1299 aa28.27■■■□□ 2.12
SHANK2-220ENST00000608988 IL16Q14005 1332 aa28.27■■■□□ 2.12
SHANK2-220ENST00000608988 DDX11L8A8MPP1 907 aa28.25■■■□□ 2.11
SHANK2-220ENST00000608988 NCOA3Q9Y6Q9 1424 aa28.24■■■□□ 2.11
SHANK2-220ENST00000608988 EIF5BO60841 1220 aaKnown RBP28.24■■■□□ 2.11
SHANK2-220ENST00000608988 RRAGDQ9NQL2 400 aaPredicted RBP28.23■■■□□ 2.11
SHANK2-220ENST00000608988 XRCC6P12956 609 aaKnown RBP eCLIP28.23■■■□□ 2.11
SHANK2-220ENST00000608988 SMC5Q8IY18 1101 aa28.23■■■□□ 2.11
SHANK2-220ENST00000608988 BCL2L13Q9BXK5 485 aa28.23■■■□□ 2.11
SHANK2-220ENST00000608988 KIDINS220Q9ULH0 1771 aa28.22■■■□□ 2.11
SHANK2-220ENST00000608988 HSCBQ8IWL3 235 aa28.22■■■□□ 2.11
SHANK2-220ENST00000608988 EVC2Q86UK5 1308 aa28.22■■■□□ 2.11
SHANK2-220ENST00000608988 MRE11P49959 708 aa28.21■■■□□ 2.11
SHANK2-220ENST00000608988 TNNT2P45379 298 aaPredicted RBP28.2■■■□□ 2.1
SHANK2-220ENST00000608988 SNX21Q969T3 373 aa28.2■■■□□ 2.1
SHANK2-220ENST00000608988 TRAK1Q9UPV9 953 aa28.2■■■□□ 2.1
SHANK2-220ENST00000608988 U2AF1L5P0DN76 240 aaPredicted RBP28.19■■■□□ 2.1
SHANK2-220ENST00000608988 PTMSP20962 102 aa28.19■■■□□ 2.1
SHANK2-220ENST00000608988 U2AF1Q01081 240 aaKnown RBP eCLIP28.19■■■□□ 2.1
SHANK2-220ENST00000608988 GLI2P10070 1586 aa28.19■■■□□ 2.1
SHANK2-220ENST00000608988 TRAK2O60296 914 aa28.19■■■□□ 2.1
SHANK2-220ENST00000608988 CIZ1Q9ULV3 898 aaPredicted RBP28.19■■■□□ 2.1
SHANK2-220ENST00000608988 RBM25P49756 843 aaKnown RBP28.18■■■□□ 2.1
SHANK2-220ENST00000608988 SMC4Q9NTJ3 1288 aa28.18■■■□□ 2.1
SHANK2-220ENST00000608988 ARHGEF28Q8N1W1 1705 aaKnown RBP28.18■■■□□ 2.1
SHANK2-220ENST00000608988 TULP4Q9NRJ4 1543 aa28.18■■■□□ 2.1
SHANK2-220ENST00000608988 ATF7IPQ6VMQ6 1270 aa28.17■■■□□ 2.1
SHANK2-220ENST00000608988 CLCN1P35523 988 aa28.16■■■□□ 2.1
SHANK2-220ENST00000608988 MFAP1P55081 439 aaKnown RBP28.16■■■□□ 2.1
SHANK2-220ENST00000608988 MED14O60244 1454 aa28.16■■■□□ 2.1
SHANK2-220ENST00000608988 TRIM27P14373 513 aa28.15■■■□□ 2.1
SHANK2-220ENST00000608988 KIF16BQ96L93 1317 aa28.15■■■□□ 2.1
SHANK2-220ENST00000608988 IPO8O15397 1037 aaKnown RBP28.15■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms