RNA–Protein interactions for RNA: ENST00000607805.5

NECAB3-222, Transcript of N-terminal EF-hand calcium binding protein 3, human

TSL 5

Gene NECAB3, Length 969 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NECAB3-222	ENST00000607805	KNDC1	Q76NI1	1749 aa		31.63	■■■□□ 2.65
NECAB3-222	ENST00000607805	MARF1	Q9Y4F3	1742 aa	Known RBP	31.62	■■■□□ 2.65
NECAB3-222	ENST00000607805	TECPR2	O15040	1411 aa		31.61	■■■□□ 2.65
NECAB3-222	ENST00000607805	ADGRF5	Q8IZF2	1346 aa		31.61	■■■□□ 2.65
NECAB3-222	ENST00000607805	CCDC144A	A2RUR9	1427 aa		31.58	■■■□□ 2.65
NECAB3-222	ENST00000607805	PXDN	Q92626	1479 aa		31.58	■■■□□ 2.65
NECAB3-222	ENST00000607805	ADAMTS2	O95450	1211 aa		31.57	■■■□□ 2.64
NECAB3-222	ENST00000607805	NGLY1	Q96IV0	654 aa		31.57	■■■□□ 2.64
NECAB3-222	ENST00000607805	EP400	Q96L91	3159 aa		31.56	■■■□□ 2.64
NECAB3-222	ENST00000607805	MYOM2	P54296	1465 aa		31.55	■■■□□ 2.64
NECAB3-222	ENST00000607805	ANKRD30B	Q9BXX2	1392 aa		31.54	■■■□□ 2.64
NECAB3-222	ENST00000607805	FMN2	Q9NZ56	1722 aa		31.53	■■■□□ 2.64
NECAB3-222	ENST00000607805	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.53	■■■□□ 2.64
NECAB3-222	ENST00000607805	LRPPRC	P42704	1394 aa	Known RBP	31.53	■■■□□ 2.64
NECAB3-222	ENST00000607805	ABCC11	Q96J66	1382 aa		31.52	■■■□□ 2.64
NECAB3-222	ENST00000607805	PIK3C2G	O75747	1445 aa		31.51	■■■□□ 2.64
NECAB3-222	ENST00000607805	MPHOSPH9	Q99550	1183 aa		31.51	■■■□□ 2.63
NECAB3-222	ENST00000607805	NPHP3	Q7Z494	1330 aa		31.5	■■■□□ 2.63
NECAB3-222	ENST00000607805	SRCAP	Q6ZRS2	3230 aa		31.49	■■■□□ 2.63
NECAB3-222	ENST00000607805	RGPD8	O14715	1765 aa	Predicted RBP	31.49	■■■□□ 2.63
NECAB3-222	ENST00000607805	RGL3	Q3MIN7	710 aa		31.49	■■■□□ 2.63
NECAB3-222	ENST00000607805	ESCO1	Q5FWF5	840 aa		31.49	■■■□□ 2.63
NECAB3-222	ENST00000607805	ATRN	O75882	1429 aa		31.49	■■■□□ 2.63
NECAB3-222	ENST00000607805	WAPL	Q7Z5K2	1190 aa		31.48	■■■□□ 2.63
NECAB3-222	ENST00000607805	USP21	Q9UK80	565 aa		31.48	■■■□□ 2.63
NECAB3-222	ENST00000607805	PLEKHH1	Q9ULM0	1364 aa		31.46	■■■□□ 2.63
NECAB3-222	ENST00000607805	STK26	Q9P289	416 aa		31.45	■■■□□ 2.63
NECAB3-222	ENST00000607805	TRPC5	Q9UL62	973 aa	Predicted RBP	31.45	■■■□□ 2.63
NECAB3-222	ENST00000607805	TMEM132E	Q6IEE7	984 aa		31.44	■■■□□ 2.62
NECAB3-222	ENST00000607805	KIF1A	Q12756	1690 aa		31.44	■■■□□ 2.62
NECAB3-222	ENST00000607805	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.44	■■■□□ 2.62
NECAB3-222	ENST00000607805	YTHDC2	Q9H6S0	1430 aa	Known RBP	31.43	■■■□□ 2.62
NECAB3-222	ENST00000607805	FOXO3	O43524	673 aa		31.43	■■■□□ 2.62
NECAB3-222	ENST00000607805	BCL9L	Q86UU0	1499 aa		31.43	■■■□□ 2.62
NECAB3-222	ENST00000607805	NRXN1	Q9ULB1	1477 aa		31.41	■■■□□ 2.62
NECAB3-222	ENST00000607805	XPC	Q01831	940 aa	Predicted RBP	31.39	■■■□□ 2.62
NECAB3-222	ENST00000607805	SIRT1	Q96EB6	747 aa		31.38	■■■□□ 2.61
NECAB3-222	ENST00000607805	ATAD2	Q6PL18	1390 aa		31.37	■■■□□ 2.61
NECAB3-222	ENST00000607805	NUTM2F	A1L443	756 aa		31.36	■■■□□ 2.61
NECAB3-222	ENST00000607805	C14orf93	Q9H972	538 aa	Known RBP	31.35	■■■□□ 2.61
NECAB3-222	ENST00000607805	SPATA31A3	Q5VYP0	1347 aa		31.32	■■■□□ 2.6
NECAB3-222	ENST00000607805	USP32	Q8NFA0	1604 aa		31.31	■■■□□ 2.6
NECAB3-222	ENST00000607805	ACIN1	Q9UKV3	1341 aa	Known RBP	31.3	■■■□□ 2.6
NECAB3-222	ENST00000607805	SLIT2	O94813	1529 aa		31.3	■■■□□ 2.6
NECAB3-222	ENST00000607805	BRWD3	Q6RI45	1802 aa		31.28	■■■□□ 2.6
NECAB3-222	ENST00000607805	GLI3	P10071	1580 aa		31.28	■■■□□ 2.6
NECAB3-222	ENST00000607805	ABCA3	Q99758	1704 aa		31.28	■■■□□ 2.6
NECAB3-222	ENST00000607805	CFAP70	Q5T0N1	1121 aa		31.26	■■■□□ 2.59
NECAB3-222	ENST00000607805	GJD4	Q96KN9	370 aa	Predicted RBP	31.26	■■■□□ 2.59
NECAB3-222	ENST00000607805	DHX57	Q6P158	1386 aa	Known RBP	31.25	■■■□□ 2.59
NECAB3-222	ENST00000607805	DLC1	Q96QB1	1528 aa		31.24	■■■□□ 2.59
NECAB3-222	ENST00000607805	KRT28	Q7Z3Y7	464 aa		31.24	■■■□□ 2.59
NECAB3-222	ENST00000607805	NWD2	Q9ULI1	1742 aa		31.23	■■■□□ 2.59
NECAB3-222	ENST00000607805	TNS3	Q68CZ2	1445 aa		31.22	■■■□□ 2.59
NECAB3-222	ENST00000607805	PLCH1	Q4KWH8	1693 aa		31.22	■■■□□ 2.59
NECAB3-222	ENST00000607805	ADGRB2	O60241	1585 aa		31.22	■■■□□ 2.59
NECAB3-222	ENST00000607805	UNC5CL	Q8IV45	518 aa		31.21	■■■□□ 2.59
NECAB3-222	ENST00000607805	PHF8	Q9UPP1	1060 aa		31.21	■■■□□ 2.59
NECAB3-222	ENST00000607805	ADGRB1	O14514	1584 aa		31.21	■■■□□ 2.59
NECAB3-222	ENST00000607805	RALGAPB	Q86X10	1494 aa		31.21	■■■□□ 2.59
NECAB3-222	ENST00000607805	PRAM1	Q96QH2	718 aa		31.17	■■■□□ 2.58
NECAB3-222	ENST00000607805	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.17	■■■□□ 2.58
NECAB3-222	ENST00000607805	SBNO1	A3KN83	1393 aa		31.17	■■■□□ 2.58
NECAB3-222	ENST00000607805	CCDC125	Q86Z20	511 aa		31.15	■■■□□ 2.58
NECAB3-222	ENST00000607805	RAB3GAP2	Q9H2M9	1393 aa		31.15	■■■□□ 2.58
NECAB3-222	ENST00000607805	ANKAR	Q7Z5J8	1434 aa		31.15	■■■□□ 2.58
NECAB3-222	ENST00000607805	PSME1	Q06323	249 aa		31.14	■■■□□ 2.58
NECAB3-222	ENST00000607805	ALS2	Q96Q42	1657 aa		31.12	■■■□□ 2.57
NECAB3-222	ENST00000607805	SAFB2	Q14151	953 aa	Known RBP eCLIP	31.11	■■■□□ 2.57
NECAB3-222	ENST00000607805	CABLES1	Q8TDN4	633 aa		31.1	■■■□□ 2.57
NECAB3-222	ENST00000607805	ARHGEF10	O15013	1369 aa		31.09	■■■□□ 2.57
NECAB3-222	ENST00000607805	NRAP	Q86VF7	1730 aa		31.09	■■■□□ 2.57
NECAB3-222	ENST00000607805	VPS72	Q15906	364 aa		31.07	■■■□□ 2.56
NECAB3-222	ENST00000607805	CRYBG1	Q9Y4K1	1723 aa		31.07	■■■□□ 2.56
NECAB3-222	ENST00000607805	ONECUT3	O60422	494 aa	Predicted RBP	31.05	■■■□□ 2.56
NECAB3-222	ENST00000607805	POGK	Q9P215	609 aa		31.05	■■■□□ 2.56
NECAB3-222	ENST00000607805	PMFBP1	Q8TBY8	1022 aa		31.03	■■■□□ 2.56
NECAB3-222	ENST00000607805	ZRANB1	Q9UGI0	708 aa		31.03	■■■□□ 2.56
NECAB3-222	ENST00000607805	BLM	P54132	1417 aa	Predicted RBP	31.03	■■■□□ 2.56
NECAB3-222	ENST00000607805	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.02	■■■□□ 2.56
NECAB3-222	ENST00000607805	TULP4	Q9NRJ4	1543 aa		31.02	■■■□□ 2.56
NECAB3-222	ENST00000607805	PRR36	Q9H6K5	1346 aa		31.01	■■■□□ 2.56
NECAB3-222	ENST00000607805	FAM83G	A6ND36	823 aa		31	■■■□□ 2.55
NECAB3-222	ENST00000607805	HAP1	P54257	671 aa	Predicted RBP	31	■■■□□ 2.55
NECAB3-222	ENST00000607805	SEPT12	Q8IYM1	358 aa		31	■■■□□ 2.55
NECAB3-222	ENST00000607805	TRAK1	Q9UPV9	953 aa		31	■■■□□ 2.55
NECAB3-222	ENST00000607805	COL14A1	Q05707	1796 aa	Known RBP	30.99	■■■□□ 2.55
NECAB3-222	ENST00000607805	LMOD2	Q6P5Q4	547 aa		30.98	■■■□□ 2.55
NECAB3-222	ENST00000607805	HIRIP3	Q9BW71	556 aa	Predicted RBP	30.98	■■■□□ 2.55
NECAB3-222	ENST00000607805	ITSN1	Q15811	1721 aa		30.97	■■■□□ 2.55
NECAB3-222	ENST00000607805	EIF3A	Q14152	1382 aa	Known RBP	30.96	■■■□□ 2.55
NECAB3-222	ENST00000607805	MINK1	Q8N4C8	1332 aa	Predicted RBP	30.96	■■■□□ 2.55
NECAB3-222	ENST00000607805	DCAF11	Q8TEB1	546 aa		30.95	■■■□□ 2.55
NECAB3-222	ENST00000607805	STAC3	Q96MF2	364 aa		30.95	■■■□□ 2.55
NECAB3-222	ENST00000607805	WASL	O00401	505 aa	Predicted RBP	30.94	■■■□□ 2.54
NECAB3-222	ENST00000607805	PLEKHG5	O94827	1062 aa		30.94	■■■□□ 2.54
NECAB3-222	ENST00000607805	KDM2A	Q9Y2K7	1162 aa		30.93	■■■□□ 2.54
NECAB3-222	ENST00000607805	GPRASP1	Q5JY77	1395 aa		30.92	■■■□□ 2.54
NECAB3-222	ENST00000607805	HRC	P23327	699 aa		30.91	■■■□□ 2.54
NECAB3-222	ENST00000607805	KRT27	Q7Z3Y8	459 aa		30.89	■■■□□ 2.54

Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms