RNA–Protein interactions for RNA: ENST00000605895.5

RER1-209, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RER1, Length 3,044 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-209ENST00000605895 CFAP70Q5T0N1 1121 aa19.29■□□□□ 0.68
RER1-209ENST00000605895 RBM27Q9P2N5 1060 aaKnown RBP19.29■□□□□ 0.68
RER1-209ENST00000605895 UQCRHLA0A096LP55 91 aa19.29■□□□□ 0.68
RER1-209ENST00000605895 UQCRHP07919 91 aa19.29■□□□□ 0.68
RER1-209ENST00000605895 TRIM27P14373 513 aa19.29■□□□□ 0.68
RER1-209ENST00000605895 EXOSC9Q06265 439 aaKnown RBP19.29■□□□□ 0.68
RER1-209ENST00000605895 TSC1Q92574 1164 aa19.29■□□□□ 0.68
RER1-209ENST00000605895 RAB3GAP1Q15042 981 aa19.28■□□□□ 0.68
RER1-209ENST00000605895 OFD1O75665 1012 aa19.28■□□□□ 0.68
RER1-209ENST00000605895 CCDC173Q0VFZ6 552 aa19.28■□□□□ 0.68
RER1-209ENST00000605895 RUNDC1Q96C34 613 aa19.27■□□□□ 0.68
RER1-209ENST00000605895 MTHFSP49914 203 aa19.27■□□□□ 0.68
RER1-209ENST00000605895 PKP1Q13835 747 aa19.27■□□□□ 0.68
RER1-209ENST00000605895 RNF214Q8ND24 703 aa19.27■□□□□ 0.68
RER1-209ENST00000605895 VIRMAQ69YN4 1812 aaKnown RBP19.27■□□□□ 0.68
RER1-209ENST00000605895 SLC12A5Q9H2X9 1139 aa19.27■□□□□ 0.67
RER1-209ENST00000605895 PRDM4Q9UKN5 801 aa19.27■□□□□ 0.67
RER1-209ENST00000605895 NOB1Q9ULX3 412 aaKnown RBP19.27■□□□□ 0.67
RER1-209ENST00000605895 ASXL1Q8IXJ9 1541 aa19.27■□□□□ 0.67
RER1-209ENST00000605895 ANKRD45Q5TZF3 282 aa19.26■□□□□ 0.67
RER1-209ENST00000605895 TMEM57Q8N5G2 664 aa19.26■□□□□ 0.67
RER1-209ENST00000605895 PRDM15P57071 1507 aaPredicted RBP19.26■□□□□ 0.67
RER1-209ENST00000605895 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
RER1-209ENST00000605895 U2SURPO15042 1029 aaKnown RBP19.25■□□□□ 0.67
RER1-209ENST00000605895 SSH1Q8WYL5 1049 aa19.25■□□□□ 0.67
RER1-209ENST00000605895 PIK3C2GO75747 1445 aa19.24■□□□□ 0.67
RER1-209ENST00000605895 DDIT3P35638 169 aa19.24■□□□□ 0.67
RER1-209ENST00000605895 FOXD4L6Q3SYB3 417 aaPredicted RBP19.24■□□□□ 0.67
RER1-209ENST00000605895 FOXD4L3Q6VB84 417 aaPredicted RBP19.24■□□□□ 0.67
RER1-209ENST00000605895 RBSNQ9H1K0 784 aa19.24■□□□□ 0.67
RER1-209ENST00000605895 GOLGA6L22H0YM25 854 aa19.24■□□□□ 0.67
RER1-209ENST00000605895 KIAA0556O60303 1618 aa19.23■□□□□ 0.67
RER1-209ENST00000605895 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.23■□□□□ 0.67
RER1-209ENST00000605895 SMC5Q8IY18 1101 aa19.23■□□□□ 0.67
RER1-209ENST00000605895 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
RER1-209ENST00000605895 BAG4O95429 457 aaKnown RBP19.22■□□□□ 0.67
RER1-209ENST00000605895 JPH4Q96JJ6 628 aa19.22■□□□□ 0.67
RER1-209ENST00000605895 EIF4G3O43432 1585 aaKnown RBP19.22■□□□□ 0.67
RER1-209ENST00000605895 PRIM1P49642 420 aaKnown RBP19.22■□□□□ 0.67
RER1-209ENST00000605895 SKOR2Q2VWA4 1001 aaPredicted RBP19.22■□□□□ 0.67
RER1-209ENST00000605895 KIF2CQ99661 725 aa19.22■□□□□ 0.67
RER1-209ENST00000605895 PTPRGP23470 1445 aa19.22■□□□□ 0.67
RER1-209ENST00000605895 AK9Q5TCS8 1911 aa19.22■□□□□ 0.67
RER1-209ENST00000605895 ADCY10Q96PN6 1610 aa19.22■□□□□ 0.67
RER1-209ENST00000605895 PRPF40AO75400 957 aaKnown RBP19.21■□□□□ 0.67
RER1-209ENST00000605895 CHGAP10645 457 aaKnown RBP19.21■□□□□ 0.67
RER1-209ENST00000605895 CALD1Q05682 793 aaKnown RBP19.21■□□□□ 0.67
RER1-209ENST00000605895 K7ELQ4 463 aaPredicted RBP19.2■□□□□ 0.66
RER1-209ENST00000605895 PBRM1Q86U86 1689 aa19.2■□□□□ 0.66
RER1-209ENST00000605895 APBB1O00213 710 aa19.19■□□□□ 0.66
RER1-209ENST00000605895 ELL2O00472 640 aaPredicted RBP19.19■□□□□ 0.66
RER1-209ENST00000605895 PPP1R9BQ96SB3 815 aa19.19■□□□□ 0.66
RER1-209ENST00000605895 ZSCAN23Q3MJ62 389 aa19.19■□□□□ 0.66
RER1-209ENST00000605895 ISY1Q9ULR0 285 aaKnown RBP19.19■□□□□ 0.66
RER1-209ENST00000605895 TRAK1Q9UPV9 953 aa19.19■□□□□ 0.66
RER1-209ENST00000605895 NINLQ9Y2I6 1382 aa19.19■□□□□ 0.66
RER1-209ENST00000605895 CROCC2H7BZ55 1655 aa19.18■□□□□ 0.66
RER1-209ENST00000605895 DNTTIP2Q5QJE6 756 aaKnown RBP19.18■□□□□ 0.66
RER1-209ENST00000605895 ITSN2Q9NZM3 1697 aa19.18■□□□□ 0.66
RER1-209ENST00000605895 RBM25P49756 843 aaKnown RBP19.18■□□□□ 0.66
RER1-209ENST00000605895 TBC1D9Q6ZT07 1266 aa19.17■□□□□ 0.66
RER1-209ENST00000605895 EIF2AK3Q9NZJ5 1116 aaKnown RBP19.17■□□□□ 0.66
RER1-209ENST00000605895 SAFB2Q14151 953 aaKnown RBP eCLIP19.17■□□□□ 0.66
RER1-209ENST00000605895 CHD1LQ86WJ1 897 aa19.17■□□□□ 0.66
RER1-209ENST00000605895 ADAMTS12P58397 1594 aa19.17■□□□□ 0.66
RER1-209ENST00000605895 ATF7IPQ6VMQ6 1270 aa19.17■□□□□ 0.66
RER1-209ENST00000605895 DDX19BQ9UMR2 479 aa19.16■□□□□ 0.66
RER1-209ENST00000605895 SYCE3A1L190 88 aa19.16■□□□□ 0.66
RER1-209ENST00000605895 SNX21Q969T3 373 aa19.16■□□□□ 0.66
RER1-209ENST00000605895 CDC42BPAQ5VT25 1732 aa19.15■□□□□ 0.66
RER1-209ENST00000605895 ZNF830Q96NB3 372 aaPredicted RBP19.15■□□□□ 0.66
RER1-209ENST00000605895 PTMAP06454 111 aaKnown RBP19.15■□□□□ 0.66
RER1-209ENST00000605895 KLHL40Q2TBA0 621 aa19.15■□□□□ 0.66
RER1-209ENST00000605895 WDR63Q8IWG1 891 aa19.14■□□□□ 0.66
RER1-209ENST00000605895 NSFL1CQ9UNZ2 370 aaKnown RBP19.14■□□□□ 0.66
RER1-209ENST00000605895 ABCC2Q92887 1545 aa19.14■□□□□ 0.65
RER1-209ENST00000605895 ZGPATQ8N5A5 531 aaKnown RBP19.14■□□□□ 0.65
RER1-209ENST00000605895 MAGI1Q96QZ7 1491 aaPredicted RBP19.14■□□□□ 0.65
RER1-209ENST00000605895 NOL8Q76FK4 1167 aaKnown RBP19.14■□□□□ 0.65
RER1-209ENST00000605895 HDAC1Q13547 482 aaPredicted RBP19.13■□□□□ 0.65
RER1-209ENST00000605895 CIZ1Q9ULV3 898 aaPredicted RBP19.13■□□□□ 0.65
RER1-209ENST00000605895 NUCB1Q02818 461 aa19.13■□□□□ 0.65
RER1-209ENST00000605895 C17orf53Q8N3J3 647 aaPredicted RBP19.13■□□□□ 0.65
RER1-209ENST00000605895 IGSF3O75054 1194 aa19.12■□□□□ 0.65
RER1-209ENST00000605895 NUTM2DQ5VT03 806 aaPredicted RBP19.12■□□□□ 0.65
RER1-209ENST00000605895 CLASP1Q7Z460 1538 aa19.12■□□□□ 0.65
RER1-209ENST00000605895 CBX1P83916 185 aa19.11■□□□□ 0.65
RER1-209ENST00000605895 TMEM132EQ6IEE7 984 aa19.11■□□□□ 0.65
RER1-209ENST00000605895 NSD3Q9BZ95 1437 aa19.11■□□□□ 0.65
RER1-209ENST00000605895 ADGRF5Q8IZF2 1346 aa19.11■□□□□ 0.65
RER1-209ENST00000605895 ZBTB40Q9NUA8 1239 aa19.11■□□□□ 0.65
RER1-209ENST00000605895 CCDC141Q6ZP82 1450 aa19.11■□□□□ 0.65
RER1-209ENST00000605895 NOL7Q9UMY1 257 aaKnown RBP19.1■□□□□ 0.65
RER1-209ENST00000605895 NCOA3Q9Y6Q9 1424 aa19.1■□□□□ 0.65
RER1-209ENST00000605895 ATP10BO94823 1461 aa19.1■□□□□ 0.65
RER1-209ENST00000605895 CFAP53Q96M91 514 aa19.09■□□□□ 0.65
RER1-209ENST00000605895 GPT2Q8TD30 523 aa19.09■□□□□ 0.65
RER1-209ENST00000605895 BCL11BQ9C0K0 894 aaPredicted RBP19.09■□□□□ 0.65
RER1-209ENST00000605895 LMBRD1Q9NUN5 540 aa19.09■□□□□ 0.65
RER1-209ENST00000605895 ABCC10Q5T3U5 1492 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms