RNA–Protein interactions for RNA: ENST00000602319.1

HCG18-242, Transcript of HLA complex group 18, humanhuman

BASIC

Gene HCG18, Length 3,342 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-242ENST00000602319 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
HCG18-242ENST00000602319 DNAJC5BQ9UF47 199 aa12.63□□□□□ -0.39
HCG18-242ENST00000602319 MROH2AA6NES4 1674 aa12.63□□□□□ -0.39
HCG18-242ENST00000602319 PPRC1Q5VV67 1664 aaKnown RBP12.62□□□□□ -0.39
HCG18-242ENST00000602319 MRE11P49959 708 aa12.62□□□□□ -0.39
HCG18-242ENST00000602319 WWC1Q8IX03 1113 aa12.62□□□□□ -0.39
HCG18-242ENST00000602319 SLKQ9H2G2 1235 aaPredicted RBP12.62□□□□□ -0.39
HCG18-242ENST00000602319 KIF1BO60333 1816 aa12.62□□□□□ -0.39
HCG18-242ENST00000602319 CCDC146Q8IYE0 955 aa12.62□□□□□ -0.39
HCG18-242ENST00000602319 ZFYVE16Q7Z3T8 1539 aa12.62□□□□□ -0.39
HCG18-242ENST00000602319 RARSP54136 660 aaKnown RBP12.62□□□□□ -0.39
HCG18-242ENST00000602319 PCDHB15Q9Y5E8 787 aa12.62□□□□□ -0.39
HCG18-242ENST00000602319 CFAP74Q9C0B2 1584 aa12.61□□□□□ -0.39
HCG18-242ENST00000602319 CHMP5Q9NZZ3 219 aa12.61□□□□□ -0.39
HCG18-242ENST00000602319 ARAP3Q8WWN8 1544 aa12.61□□□□□ -0.39
HCG18-242ENST00000602319 PANK1Q8TE04 598 aa12.61□□□□□ -0.39
HCG18-242ENST00000602319 QRICH2Q9H0J4 1663 aa12.61□□□□□ -0.39
HCG18-242ENST00000602319 ZNF518AQ6AHZ1 1483 aa12.61□□□□□ -0.39
HCG18-242ENST00000602319 CCDC27Q2M243 656 aa12.6□□□□□ -0.39
HCG18-242ENST00000602319 GLIPR1L2Q4G1C9 344 aa12.6□□□□□ -0.39
HCG18-242ENST00000602319 PKNOX2Q96KN3 472 aa12.6□□□□□ -0.39
HCG18-242ENST00000602319 MROH1Q8NDA8 1641 aa12.6□□□□□ -0.39
HCG18-242ENST00000602319 PANK2Q9BZ23 570 aa12.6□□□□□ -0.39
HCG18-242ENST00000602319 PDZRN3Q9UPQ7 1066 aa12.6□□□□□ -0.39
HCG18-242ENST00000602319 REREQ9P2R6 1566 aa12.6□□□□□ -0.39
HCG18-242ENST00000602319 UPF2Q9HAU5 1272 aaKnown RBP12.6□□□□□ -0.39
HCG18-242ENST00000602319 COG6Q9Y2V7 657 aa12.6□□□□□ -0.39
HCG18-242ENST00000602319 PNNQ9H307 717 aaKnown RBP12.59□□□□□ -0.39
HCG18-242ENST00000602319 SLC24A1O60721 1099 aa12.59□□□□□ -0.39
HCG18-242ENST00000602319 WDR63Q8IWG1 891 aa12.59□□□□□ -0.39
HCG18-242ENST00000602319 TRAK2O60296 914 aa12.58□□□□□ -0.4
HCG18-242ENST00000602319 RLBP1P12271 317 aa12.58□□□□□ -0.4
HCG18-242ENST00000602319 DDX11L8A8MPP1 907 aa12.57□□□□□ -0.4
HCG18-242ENST00000602319 ANKRD26Q9UPS8 1709 aa12.57□□□□□ -0.4
HCG18-242ENST00000602319 CARD14Q9BXL6 1004 aa12.57□□□□□ -0.4
HCG18-242ENST00000602319 SNX21Q969T3 373 aa12.57□□□□□ -0.4
HCG18-242ENST00000602319 GRPEL1Q9HAV7 217 aa12.57□□□□□ -0.4
HCG18-242ENST00000602319 PPLO60437 1756 aa12.57□□□□□ -0.4
HCG18-242ENST00000602319 ERBB4Q15303 1308 aa12.56□□□□□ -0.4
HCG18-242ENST00000602319 RWDD1Q9H446 243 aaPredicted RBP12.55□□□□□ -0.4
HCG18-242ENST00000602319 PLCH2O75038 1416 aa12.55□□□□□ -0.4
HCG18-242ENST00000602319 HSP90AA1P07900 732 aaKnown RBP12.55□□□□□ -0.4
HCG18-242ENST00000602319 HDAC1Q13547 482 aaPredicted RBP12.55□□□□□ -0.4
HCG18-242ENST00000602319 CHMP7Q8WUX9 453 aaPredicted RBP12.55□□□□□ -0.4
HCG18-242ENST00000602319 RBM25P49756 843 aaKnown RBP12.55□□□□□ -0.4
HCG18-242ENST00000602319 IBTKQ9P2D0 1353 aaPredicted RBP12.54□□□□□ -0.4
HCG18-242ENST00000602319 C22orf23Q9BZE7 217 aa12.54□□□□□ -0.4
HCG18-242ENST00000602319 CIZ1Q9ULV3 898 aaPredicted RBP12.54□□□□□ -0.4
HCG18-242ENST00000602319 ADGRB3O60242 1522 aa12.54□□□□□ -0.4
HCG18-242ENST00000602319 SMC5Q8IY18 1101 aa12.54□□□□□ -0.4
HCG18-242ENST00000602319 RUNDC1Q96C34 613 aa12.54□□□□□ -0.4
HCG18-242ENST00000602319 ZCCHC11Q5TAX3 1644 aaKnown RBP12.54□□□□□ -0.4
HCG18-242ENST00000602319 ESPNB1AK53 854 aa12.54□□□□□ -0.4
HCG18-242ENST00000602319 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
HCG18-242ENST00000602319 MVPQ14764 893 aaKnown RBP12.54□□□□□ -0.4
HCG18-242ENST00000602319 TPM2P07951 284 aa12.53□□□□□ -0.4
HCG18-242ENST00000602319 HSP90AA2PQ14568 343 aaPredicted RBP12.53□□□□□ -0.4
HCG18-242ENST00000602319 NAP1L5Q96NT1 182 aaPredicted RBP12.53□□□□□ -0.4
HCG18-242ENST00000602319 ADGRB1O14514 1584 aa12.53□□□□□ -0.4
HCG18-242ENST00000602319 EFCAB6Q5THR3 1501 aa12.53□□□□□ -0.4
HCG18-242ENST00000602319 CLEC17AQ6ZS10 378 aa12.52□□□□□ -0.4
HCG18-242ENST00000602319 TNNQ9UQP3 1299 aa12.52□□□□□ -0.41
HCG18-242ENST00000602319 LMTK2Q8IWU2 1503 aa12.52□□□□□ -0.41
HCG18-242ENST00000602319 PTMSP20962 102 aa12.52□□□□□ -0.41
HCG18-242ENST00000602319 MED14O60244 1454 aa12.51□□□□□ -0.41
HCG18-242ENST00000602319 ABCA9Q8IUA7 1624 aa12.51□□□□□ -0.41
HCG18-242ENST00000602319 COL3A1P02461 1466 aaPredicted RBP12.51□□□□□ -0.41
HCG18-242ENST00000602319 NOS1P29475 1434 aa12.51□□□□□ -0.41
HCG18-242ENST00000602319 PPP1R9BQ96SB3 815 aa12.51□□□□□ -0.41
HCG18-242ENST00000602319 RAB3GAP1Q15042 981 aa12.5□□□□□ -0.41
HCG18-242ENST00000602319 ZMYND15Q9H091 742 aa12.5□□□□□ -0.41
HCG18-242ENST00000602319 FANCAO15360 1455 aa12.5□□□□□ -0.41
HCG18-242ENST00000602319 CHD1O14646 1710 aa12.5□□□□□ -0.41
HCG18-242ENST00000602319 ARHGEF28Q8N1W1 1705 aaKnown RBP12.5□□□□□ -0.41
HCG18-242ENST00000602319 CANXP27824 592 aaKnown RBP12.5□□□□□ -0.41
HCG18-242ENST00000602319 TRAPPC8Q9Y2L5 1435 aa12.5□□□□□ -0.41
HCG18-242ENST00000602319 TERF1P54274 439 aa12.49□□□□□ -0.41
HCG18-242ENST00000602319 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.49□□□□□ -0.41
HCG18-242ENST00000602319 MYH16Q9H6N6 1097 aa12.49□□□□□ -0.41
HCG18-242ENST00000602319 NSD3Q9BZ95 1437 aa12.49□□□□□ -0.41
HCG18-242ENST00000602319 CDC42BPGQ6DT37 1551 aa12.49□□□□□ -0.41
HCG18-242ENST00000602319 SKOR2Q2VWA4 1001 aaPredicted RBP12.48□□□□□ -0.41
HCG18-242ENST00000602319 NSD2O96028 1365 aa12.48□□□□□ -0.41
HCG18-242ENST00000602319 UHRF1BP1LA0JNW5 1464 aa12.48□□□□□ -0.41
HCG18-242ENST00000602319 ATP7AQ04656 1500 aa12.47□□□□□ -0.41
HCG18-242ENST00000602319 GAS2L3Q86XJ1 694 aa12.47□□□□□ -0.41
HCG18-242ENST00000602319 HSCBQ8IWL3 235 aa12.47□□□□□ -0.41
HCG18-242ENST00000602319 TCP11L2Q8N4U5 519 aa12.47□□□□□ -0.41
HCG18-242ENST00000602319 UGGT1Q9NYU2 1555 aa12.47□□□□□ -0.41
HCG18-242ENST00000602319 TNPO1Q92973 898 aaKnown RBP12.47□□□□□ -0.41
HCG18-242ENST00000602319 KIF2CQ99661 725 aa12.46□□□□□ -0.41
HCG18-242ENST00000602319 GZF1Q9H116 711 aaPredicted RBP12.46□□□□□ -0.41
HCG18-242ENST00000602319 ZKSCAN2Q63HK3 967 aa12.46□□□□□ -0.42
HCG18-242ENST00000602319 CCDC173Q0VFZ6 552 aa12.45□□□□□ -0.42
HCG18-242ENST00000602319 CD109Q6YHK3 1445 aa12.45□□□□□ -0.42
HCG18-242ENST00000602319 YEATS2Q9ULM3 1422 aa12.45□□□□□ -0.42
HCG18-242ENST00000602319 CLTCQ00610 1675 aaKnown RBP12.45□□□□□ -0.42
HCG18-242ENST00000602319 PDCL3Q9H2J4 239 aa12.45□□□□□ -0.42
HCG18-242ENST00000602319 ABCC11Q96J66 1382 aa12.45□□□□□ -0.42
HCG18-242ENST00000602319 DZIP1LQ8IYY4 767 aaKnown RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms