RNA–Protein interactions for RNA: ENST00000602011.5

SHKBP1-227, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 897 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-227ENST00000602011 USP21Q9UK80 565 aa26.54■■□□□ 1.84
SHKBP1-227ENST00000602011 FOXD1Q16676 465 aa26.53■■□□□ 1.84
SHKBP1-227ENST00000602011 PPLO60437 1756 aa26.51■■□□□ 1.83
SHKBP1-227ENST00000602011 XPCQ01831 940 aaPredicted RBP26.51■■□□□ 1.83
SHKBP1-227ENST00000602011 NPHP3Q7Z494 1330 aa26.5■■□□□ 1.83
SHKBP1-227ENST00000602011 RGL3Q3MIN7 710 aa26.5■■□□□ 1.83
SHKBP1-227ENST00000602011 ADGRF5Q8IZF2 1346 aa26.49■■□□□ 1.83
SHKBP1-227ENST00000602011 ESCO1Q5FWF5 840 aa26.49■■□□□ 1.83
SHKBP1-227ENST00000602011 LRPPRCP42704 1394 aaKnown RBP26.48■■□□□ 1.83
SHKBP1-227ENST00000602011 ABCC11Q96J66 1382 aa26.48■■□□□ 1.83
SHKBP1-227ENST00000602011 NUTM2FA1L443 756 aa26.48■■□□□ 1.83
SHKBP1-227ENST00000602011 SIRT1Q96EB6 747 aa26.48■■□□□ 1.83
SHKBP1-227ENST00000602011 SPATA31E1Q6ZUB1 1445 aa26.48■■□□□ 1.83
SHKBP1-227ENST00000602011 TRPC5Q9UL62 973 aaPredicted RBP26.47■■□□□ 1.83
SHKBP1-227ENST00000602011 FNBP4Q8N3X1 1017 aaPredicted RBP26.46■■□□□ 1.83
SHKBP1-227ENST00000602011 STK26Q9P289 416 aa26.46■■□□□ 1.83
SHKBP1-227ENST00000602011 TECPR2O15040 1411 aa26.46■■□□□ 1.83
SHKBP1-227ENST00000602011 COL22A1Q8NFW1 1626 aaPredicted RBP26.45■■□□□ 1.82
SHKBP1-227ENST00000602011 MYOM2P54296 1465 aa26.44■■□□□ 1.82
SHKBP1-227ENST00000602011 WAPLQ7Z5K2 1190 aa26.44■■□□□ 1.82
SHKBP1-227ENST00000602011 ATRNO75882 1429 aa26.44■■□□□ 1.82
SHKBP1-227ENST00000602011 ATAD2Q6PL18 1390 aa26.44■■□□□ 1.82
SHKBP1-227ENST00000602011 PXDNQ92626 1479 aa26.43■■□□□ 1.82
SHKBP1-227ENST00000602011 FOXO3O43524 673 aa26.43■■□□□ 1.82
SHKBP1-227ENST00000602011 CDC42BPGQ6DT37 1551 aa26.42■■□□□ 1.82
SHKBP1-227ENST00000602011 SRCAPQ6ZRS2 3230 aa26.41■■□□□ 1.82
SHKBP1-227ENST00000602011 PLEKHH1Q9ULM0 1364 aa26.4■■□□□ 1.82
SHKBP1-227ENST00000602011 BCL9LQ86UU0 1499 aa26.39■■□□□ 1.82
SHKBP1-227ENST00000602011 TMEM132EQ6IEE7 984 aa26.39■■□□□ 1.82
SHKBP1-227ENST00000602011 C14orf93Q9H972 538 aaKnown RBP26.38■■□□□ 1.81
SHKBP1-227ENST00000602011 PIK3C2GO75747 1445 aa26.37■■□□□ 1.81
SHKBP1-227ENST00000602011 EP400Q96L91 3159 aa26.34■■□□□ 1.81
SHKBP1-227ENST00000602011 MARF1Q9Y4F3 1742 aaKnown RBP26.34■■□□□ 1.81
SHKBP1-227ENST00000602011 DHX57Q6P158 1386 aaKnown RBP26.33■■□□□ 1.81
SHKBP1-227ENST00000602011 YTHDC2Q9H6S0 1430 aaKnown RBP26.33■■□□□ 1.81
SHKBP1-227ENST00000602011 GJD4Q96KN9 370 aaPredicted RBP26.3■■□□□ 1.8
SHKBP1-227ENST00000602011 STAC3Q96MF2 364 aa26.3■■□□□ 1.8
SHKBP1-227ENST00000602011 IFT172Q9UG01 1749 aa26.3■■□□□ 1.8
SHKBP1-227ENST00000602011 PLEKHG5O94827 1062 aa26.29■■□□□ 1.8
SHKBP1-227ENST00000602011 PSME1Q06323 249 aa26.29■■□□□ 1.8
SHKBP1-227ENST00000602011 FMN2Q9NZ56 1722 aa26.27■■□□□ 1.8
SHKBP1-227ENST00000602011 KNDC1Q76NI1 1749 aa26.26■■□□□ 1.79
SHKBP1-227ENST00000602011 SPATA31A3Q5VYP0 1347 aa26.26■■□□□ 1.79
SHKBP1-227ENST00000602011 KRT28Q7Z3Y7 464 aa26.26■■□□□ 1.79
SHKBP1-227ENST00000602011 NRXN1Q9ULB1 1477 aa26.25■■□□□ 1.79
SHKBP1-227ENST00000602011 CFAP70Q5T0N1 1121 aa26.25■■□□□ 1.79
SHKBP1-227ENST00000602011 ZRANB1Q9UGI0 708 aa26.25■■□□□ 1.79
SHKBP1-227ENST00000602011 GLI3P10071 1580 aa26.24■■□□□ 1.79
SHKBP1-227ENST00000602011 RALGAPBQ86X10 1494 aa26.24■■□□□ 1.79
SHKBP1-227ENST00000602011 CCDC125Q86Z20 511 aa26.24■■□□□ 1.79
SHKBP1-227ENST00000602011 UNC5CLQ8IV45 518 aa26.24■■□□□ 1.79
SHKBP1-227ENST00000602011 HRCP23327 699 aa26.23■■□□□ 1.79
SHKBP1-227ENST00000602011 CABLES1Q8TDN4 633 aa26.23■■□□□ 1.79
SHKBP1-227ENST00000602011 PHF8Q9UPP1 1060 aa26.23■■□□□ 1.79
SHKBP1-227ENST00000602011 SLIT2O94813 1529 aa26.23■■□□□ 1.79
SHKBP1-227ENST00000602011 RGPD8O14715 1765 aaPredicted RBP26.21■■□□□ 1.79
SHKBP1-227ENST00000602011 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.21■■□□□ 1.79
SHKBP1-227ENST00000602011 KIF1AQ12756 1690 aa26.2■■□□□ 1.78
SHKBP1-227ENST00000602011 SAFB2Q14151 953 aaKnown RBP eCLIP26.2■■□□□ 1.78
SHKBP1-227ENST00000602011 PRAM1Q96QH2 718 aa26.2■■□□□ 1.78
SHKBP1-227ENST00000602011 POGKQ9P215 609 aa26.2■■□□□ 1.78
SHKBP1-227ENST00000602011 USP32Q8NFA0 1604 aa26.2■■□□□ 1.78
SHKBP1-227ENST00000602011 RAB3GAP2Q9H2M9 1393 aa26.19■■□□□ 1.78
SHKBP1-227ENST00000602011 BRWD3Q6RI45 1802 aa26.17■■□□□ 1.78
SHKBP1-227ENST00000602011 HAP1P54257 671 aaPredicted RBP26.17■■□□□ 1.78
SHKBP1-227ENST00000602011 SBNO1A3KN83 1393 aa26.17■■□□□ 1.78
SHKBP1-227ENST00000602011 TNS3Q68CZ2 1445 aa26.15■■□□□ 1.78
SHKBP1-227ENST00000602011 LMOD2Q6P5Q4 547 aa26.15■■□□□ 1.78
SHKBP1-227ENST00000602011 DEFB132Q7Z7B7 95 aa26.15■■□□□ 1.78
SHKBP1-227ENST00000602011 DLC1Q96QB1 1528 aa26.14■■□□□ 1.77
SHKBP1-227ENST00000602011 ANKARQ7Z5J8 1434 aa26.14■■□□□ 1.77
SHKBP1-227ENST00000602011 ARHGEF10O15013 1369 aa26.13■■□□□ 1.77
SHKBP1-227ENST00000602011 EIF3AQ14152 1382 aaKnown RBP26.13■■□□□ 1.77
SHKBP1-227ENST00000602011 SEPT12Q8IYM1 358 aa26.13■■□□□ 1.77
SHKBP1-227ENST00000602011 CCDC9Q9Y3X0 531 aaKnown RBP26.12■■□□□ 1.77
SHKBP1-227ENST00000602011 BLMP54132 1417 aaPredicted RBP26.12■■□□□ 1.77
SHKBP1-227ENST00000602011 PMFBP1Q8TBY8 1022 aa26.11■■□□□ 1.77
SHKBP1-227ENST00000602011 PLCH1Q4KWH8 1693 aa26.1■■□□□ 1.77
SHKBP1-227ENST00000602011 VPS72Q15906 364 aa26.09■■□□□ 1.77
SHKBP1-227ENST00000602011 DCAF11Q8TEB1 546 aa26.09■■□□□ 1.77
SHKBP1-227ENST00000602011 ABCA3Q99758 1704 aa26.08■■□□□ 1.77
SHKBP1-227ENST00000602011 TRAK1Q9UPV9 953 aa26.07■■□□□ 1.76
SHKBP1-227ENST00000602011 FAM83GA6ND36 823 aa26.06■■□□□ 1.76
SHKBP1-227ENST00000602011 ONECUT3O60422 494 aaPredicted RBP26.05■■□□□ 1.76
SHKBP1-227ENST00000602011 HIRIP3Q9BW71 556 aaPredicted RBP26.05■■□□□ 1.76
SHKBP1-227ENST00000602011 KDM2AQ9Y2K7 1162 aa26.05■■□□□ 1.76
SHKBP1-227ENST00000602011 GPRASP1Q5JY77 1395 aa26.05■■□□□ 1.76
SHKBP1-227ENST00000602011 WASLO00401 505 aaPredicted RBP26.03■■□□□ 1.76
SHKBP1-227ENST00000602011 NWD2Q9ULI1 1742 aa26.02■■□□□ 1.76
SHKBP1-227ENST00000602011 A0A0G2JS52 829 aa26.02■■□□□ 1.76
SHKBP1-227ENST00000602011 MYT1Q01538 1121 aa26.02■■□□□ 1.76
SHKBP1-227ENST00000602011 KRT27Q7Z3Y8 459 aa26.02■■□□□ 1.76
SHKBP1-227ENST00000602011 ADGRB1O14514 1584 aa26.02■■□□□ 1.76
SHKBP1-227ENST00000602011 SF3B2Q13435 895 aaKnown RBP26.01■■□□□ 1.75
SHKBP1-227ENST00000602011 ADGRB2O60241 1585 aa25.99■■□□□ 1.75
SHKBP1-227ENST00000602011 MINK1Q8N4C8 1332 aaPredicted RBP25.99■■□□□ 1.75
SHKBP1-227ENST00000602011 PRR36Q9H6K5 1346 aa25.98■■□□□ 1.75
SHKBP1-227ENST00000602011 FAM98CQ17RN3 349 aaKnown RBP25.98■■□□□ 1.75
SHKBP1-227ENST00000602011 TRPM3Q9HCF6 1732 aaPredicted RBP25.97■■□□□ 1.75
SHKBP1-227ENST00000602011 NGDNQ8NEJ9 315 aaKnown RBP25.97■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms