RNA–Protein interactions for RNA: ENST00000598564.5

SH3GL1-206, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 2 BASIC

Gene SH3GL1, Length 2,194 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-206ENST00000598564 PUS7Q96PZ0 661 aaKnown RBP28.84■■■□□ 2.21
SH3GL1-206ENST00000598564 XRN1Q8IZH2 1706 aaKnown RBP28.84■■■□□ 2.21
SH3GL1-206ENST00000598564 CHD2O14647 1828 aaKnown RBP28.82■■■□□ 2.2
SH3GL1-206ENST00000598564 PLEKHH1Q9ULM0 1364 aa28.81■■■□□ 2.2
SH3GL1-206ENST00000598564 KCNA6P17658 529 aa28.8■■■□□ 2.2
SH3GL1-206ENST00000598564 SRPK2P78362 688 aaKnown RBP28.78■■■□□ 2.2
SH3GL1-206ENST00000598564 TULP4Q9NRJ4 1543 aa28.77■■■□□ 2.2
SH3GL1-206ENST00000598564 DMRT2Q9Y5R5 561 aa28.77■■■□□ 2.2
SH3GL1-206ENST00000598564 STRCQ7RTU9 1775 aa28.76■■■□□ 2.19
SH3GL1-206ENST00000598564 ATAD2Q6PL18 1390 aa28.74■■■□□ 2.19
SH3GL1-206ENST00000598564 CDK19Q9BWU1 502 aa28.73■■■□□ 2.19
SH3GL1-206ENST00000598564 NWD1Q149M9 1564 aa28.73■■■□□ 2.19
SH3GL1-206ENST00000598564 WASLO00401 505 aaPredicted RBP28.72■■■□□ 2.19
SH3GL1-206ENST00000598564 CABP2Q9NPB3 220 aa28.71■■■□□ 2.19
SH3GL1-206ENST00000598564 NINLQ9Y2I6 1382 aa28.71■■■□□ 2.19
SH3GL1-206ENST00000598564 ADGRB2O60241 1585 aa28.71■■■□□ 2.19
SH3GL1-206ENST00000598564 NKTRP30414 1462 aaKnown RBP28.7■■■□□ 2.19
SH3GL1-206ENST00000598564 ANP32CO43423 234 aa28.69■■■□□ 2.18
SH3GL1-206ENST00000598564 TMC1Q8TDI8 760 aa28.69■■■□□ 2.18
SH3GL1-206ENST00000598564 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.67■■■□□ 2.18
SH3GL1-206ENST00000598564 PANK3Q9H999 370 aa28.66■■■□□ 2.18
SH3GL1-206ENST00000598564 MYOM1P52179 1685 aa28.65■■■□□ 2.18
SH3GL1-206ENST00000598564 PROSER2Q86WR7 435 aaPredicted RBP28.64■■■□□ 2.18
SH3GL1-206ENST00000598564 C14orf37Q86TY3 774 aa28.63■■■□□ 2.17
SH3GL1-206ENST00000598564 AEBP2Q6ZN18 517 aaPredicted RBP28.61■■■□□ 2.17
SH3GL1-206ENST00000598564 KNSTRNQ9Y448 316 aa28.6■■■□□ 2.17
SH3GL1-206ENST00000598564 SLC12A5Q9H2X9 1139 aa28.59■■■□□ 2.17
SH3GL1-206ENST00000598564 ADGRL3Q9HAR2 1447 aa28.59■■■□□ 2.17
SH3GL1-206ENST00000598564 TERF2IPQ9NYB0 399 aa28.58■■■□□ 2.17
SH3GL1-206ENST00000598564 NUDT16Q96DE0 195 aaKnown RBP28.58■■■□□ 2.17
SH3GL1-206ENST00000598564 CCDC61Q9Y6R9 512 aa28.58■■■□□ 2.17
SH3GL1-206ENST00000598564 MIER1Q8N108 512 aa28.57■■■□□ 2.16
SH3GL1-206ENST00000598564 NCOA3Q9Y6Q9 1424 aa28.57■■■□□ 2.16
SH3GL1-206ENST00000598564 ANKRD36BQ8N2N9 1353 aa28.56■■■□□ 2.16
SH3GL1-206ENST00000598564 CDC42BPGQ6DT37 1551 aa28.55■■■□□ 2.16
SH3GL1-206ENST00000598564 HDGFL2Q7Z4V5 671 aaPredicted RBP28.55■■■□□ 2.16
SH3GL1-206ENST00000598564 NALCNQ8IZF0 1738 aa28.54■■■□□ 2.16
SH3GL1-206ENST00000598564 PER1O15534 1290 aaPredicted RBP28.54■■■□□ 2.16
SH3GL1-206ENST00000598564 CABP1Q9NZU7 370 aa28.53■■■□□ 2.16
SH3GL1-206ENST00000598564 PPIP5K1Q6PFW1 1433 aa28.53■■■□□ 2.16
SH3GL1-206ENST00000598564 ATP7BP35670 1465 aa28.52■■■□□ 2.16
SH3GL1-206ENST00000598564 RBM33Q96EV2 1170 aaKnown RBP28.52■■■□□ 2.16
SH3GL1-206ENST00000598564 ANKARQ7Z5J8 1434 aa28.52■■■□□ 2.16
SH3GL1-206ENST00000598564 C19orf44Q9H6X5 657 aa28.51■■■□□ 2.15
SH3GL1-206ENST00000598564 STRCP1A6NGW2 1772 aa28.51■■■□□ 2.15
SH3GL1-206ENST00000598564 TMEM94Q12767 1356 aa28.51■■■□□ 2.15
SH3GL1-206ENST00000598564 KTN1Q86UP2 1357 aaKnown RBP28.5■■■□□ 2.15
SH3GL1-206ENST00000598564 ZNF335Q9H4Z2 1342 aaPredicted RBP28.49■■■□□ 2.15
SH3GL1-206ENST00000598564 NUTM2FA1L443 756 aa28.48■■■□□ 2.15
SH3GL1-206ENST00000598564 PRKRIP1Q9H875 184 aaPredicted RBP28.48■■■□□ 2.15
SH3GL1-206ENST00000598564 ITSN1Q15811 1721 aa28.48■■■□□ 2.15
SH3GL1-206ENST00000598564 FMN2Q9NZ56 1722 aa28.48■■■□□ 2.15
SH3GL1-206ENST00000598564 PRR36Q9H6K5 1346 aa28.46■■■□□ 2.15
SH3GL1-206ENST00000598564 A0A1W2PP64 1363 aa28.46■■■□□ 2.15
SH3GL1-206ENST00000598564 NSD3Q9BZ95 1437 aa28.45■■■□□ 2.15
SH3GL1-206ENST00000598564 DCCP43146 1447 aa28.44■■■□□ 2.14
SH3GL1-206ENST00000598564 RALBP1Q15311 655 aa28.44■■■□□ 2.14
SH3GL1-206ENST00000598564 ZNF692Q9BU19 519 aaPredicted RBP28.44■■■□□ 2.14
SH3GL1-206ENST00000598564 NPC1L1Q9UHC9 1359 aa28.44■■■□□ 2.14
SH3GL1-206ENST00000598564 ATF3P18847 181 aa28.44■■■□□ 2.14
SH3GL1-206ENST00000598564 CNGB1Q14028 1251 aaPredicted RBP28.44■■■□□ 2.14
SH3GL1-206ENST00000598564 CARD14Q9BXL6 1004 aa28.44■■■□□ 2.14
SH3GL1-206ENST00000598564 CGNL1Q0VF96 1302 aa28.44■■■□□ 2.14
SH3GL1-206ENST00000598564 MSH6P52701 1360 aa28.43■■■□□ 2.14
SH3GL1-206ENST00000598564 TOPAZ1Q8N9V7 1692 aa28.43■■■□□ 2.14
SH3GL1-206ENST00000598564 PLEKHG3A1L390 1219 aa28.43■■■□□ 2.14
SH3GL1-206ENST00000598564 CC2D1BQ5T0F9 858 aaKnown RBP28.41■■■□□ 2.14
SH3GL1-206ENST00000598564 CD163L1Q9NR16 1453 aa28.41■■■□□ 2.14
SH3GL1-206ENST00000598564 LRRC7Q96NW7 1537 aa28.41■■■□□ 2.14
SH3GL1-206ENST00000598564 USP32Q8NFA0 1604 aa28.41■■■□□ 2.14
SH3GL1-206ENST00000598564 AMER1Q5JTC6 1135 aaPredicted RBP28.4■■■□□ 2.14
SH3GL1-206ENST00000598564 CADPS2Q86UW7 1296 aa28.4■■■□□ 2.14
SH3GL1-206ENST00000598564 CCER2I3L3R5 266 aa28.4■■■□□ 2.14
SH3GL1-206ENST00000598564 CPSF1Q10570 1443 aaKnown RBP28.39■■■□□ 2.13
SH3GL1-206ENST00000598564 NSD2O96028 1365 aa28.37■■■□□ 2.13
SH3GL1-206ENST00000598564 NGDNQ8NEJ9 315 aaKnown RBP28.37■■■□□ 2.13
SH3GL1-206ENST00000598564 ACEP12821 1306 aa28.36■■■□□ 2.13
SH3GL1-206ENST00000598564 EDC4Q6P2E9 1401 aaKnown RBP28.35■■■□□ 2.13
SH3GL1-206ENST00000598564 PARD3Q8TEW0 1356 aa28.35■■■□□ 2.13
SH3GL1-206ENST00000598564 RGPD8O14715 1765 aaPredicted RBP28.34■■■□□ 2.13
SH3GL1-206ENST00000598564 ESCO1Q5FWF5 840 aa28.33■■■□□ 2.13
SH3GL1-206ENST00000598564 PMFBP1Q8TBY8 1022 aa28.33■■■□□ 2.13
SH3GL1-206ENST00000598564 AKAP12Q02952 1782 aa28.33■■■□□ 2.13
SH3GL1-206ENST00000598564 POLR3AO14802 1390 aaPredicted RBP28.33■■■□□ 2.13
SH3GL1-206ENST00000598564 PHF8Q9UPP1 1060 aa28.33■■■□□ 2.12
SH3GL1-206ENST00000598564 MYBBP1AQ9BQG0 1328 aaKnown RBP28.32■■■□□ 2.12
SH3GL1-206ENST00000598564 MON2Q7Z3U7 1717 aa28.3■■■□□ 2.12
SH3GL1-206ENST00000598564 XIRP1Q702N8 1843 aaKnown RBP28.3■■■□□ 2.12
SH3GL1-206ENST00000598564 C1orf167Q5SNV9 1468 aa28.29■■■□□ 2.12
SH3GL1-206ENST00000598564 USP6P35125 1406 aa28.28■■■□□ 2.12
SH3GL1-206ENST00000598564 MORC1Q86VD1 984 aa28.27■■■□□ 2.12
SH3GL1-206ENST00000598564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP28.27■■■□□ 2.12
SH3GL1-206ENST00000598564 MST1RQ04912 1400 aa28.27■■■□□ 2.12
SH3GL1-206ENST00000598564 BRD4O60885 1362 aaPredicted RBP28.25■■■□□ 2.11
SH3GL1-206ENST00000598564 NLRP13Q86W25 1043 aa28.24■■■□□ 2.11
SH3GL1-206ENST00000598564 FYB1O15117 783 aa28.24■■■□□ 2.11
SH3GL1-206ENST00000598564 KIF1AQ12756 1690 aa28.24■■■□□ 2.11
SH3GL1-206ENST00000598564 TTC21AQ8NDW8 1320 aa28.23■■■□□ 2.11
SH3GL1-206ENST00000598564 KIF20BQ96Q89 1820 aa28.23■■■□□ 2.11
SH3GL1-206ENST00000598564 PSME1Q06323 249 aa28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms