RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ESCO1Q5FWF5 840 aa15.77■□□□□ 0.12
CHMP2A-202ENST00000596708 STK26Q9P289 416 aa15.77■□□□□ 0.12
CHMP2A-202ENST00000596708 MPHOSPH9Q99550 1183 aa15.76■□□□□ 0.11
CHMP2A-202ENST00000596708 PRAG1Q86YV5 1406 aa15.76■□□□□ 0.11
CHMP2A-202ENST00000596708 MARF1Q9Y4F3 1742 aaKnown RBP15.74■□□□□ 0.11
CHMP2A-202ENST00000596708 NUTM2FA1L443 756 aa15.74■□□□□ 0.11
CHMP2A-202ENST00000596708 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
CHMP2A-202ENST00000596708 USP21Q9UK80 565 aa15.74■□□□□ 0.11
CHMP2A-202ENST00000596708 RGS12O14924 1447 aa15.74■□□□□ 0.11
CHMP2A-202ENST00000596708 NPHP3Q7Z494 1330 aa15.73■□□□□ 0.11
CHMP2A-202ENST00000596708 RGPD8O14715 1765 aaPredicted RBP15.73■□□□□ 0.11
CHMP2A-202ENST00000596708 TMEM132EQ6IEE7 984 aa15.73■□□□□ 0.11
CHMP2A-202ENST00000596708 CDC42BPGQ6DT37 1551 aa15.73■□□□□ 0.11
CHMP2A-202ENST00000596708 ANKRD30BQ9BXX2 1392 aa15.73■□□□□ 0.11
CHMP2A-202ENST00000596708 COL22A1Q8NFW1 1626 aaPredicted RBP15.72■□□□□ 0.11
CHMP2A-202ENST00000596708 KNDC1Q76NI1 1749 aa15.72■□□□□ 0.11
CHMP2A-202ENST00000596708 FOXO3O43524 673 aa15.72■□□□□ 0.11
CHMP2A-202ENST00000596708 TRPC5Q9UL62 973 aaPredicted RBP15.72■□□□□ 0.11
CHMP2A-202ENST00000596708 XPCQ01831 940 aaPredicted RBP15.71■□□□□ 0.11
CHMP2A-202ENST00000596708 SPATA31E1Q6ZUB1 1445 aa15.7■□□□□ 0.1
CHMP2A-202ENST00000596708 LRPPRCP42704 1394 aaKnown RBP15.7■□□□□ 0.1
CHMP2A-202ENST00000596708 FMN2Q9NZ56 1722 aa15.68■□□□□ 0.1
CHMP2A-202ENST00000596708 ABCC11Q96J66 1382 aa15.68■□□□□ 0.1
CHMP2A-202ENST00000596708 PLEKHH1Q9ULM0 1364 aa15.68■□□□□ 0.1
CHMP2A-202ENST00000596708 FNBP4Q8N3X1 1017 aaPredicted RBP15.68■□□□□ 0.1
CHMP2A-202ENST00000596708 TECPR2O15040 1411 aa15.68■□□□□ 0.1
CHMP2A-202ENST00000596708 PXDNQ92626 1479 aa15.67■□□□□ 0.1
CHMP2A-202ENST00000596708 YTHDC2Q9H6S0 1430 aaKnown RBP15.67■□□□□ 0.1
CHMP2A-202ENST00000596708 PIK3C2GO75747 1445 aa15.66■□□□□ 0.1
CHMP2A-202ENST00000596708 KIF1AQ12756 1690 aa15.66■□□□□ 0.1
CHMP2A-202ENST00000596708 MYOM2P54296 1465 aa15.65■□□□□ 0.1
CHMP2A-202ENST00000596708 ATRNO75882 1429 aa15.65■□□□□ 0.1
CHMP2A-202ENST00000596708 ACIN1Q9UKV3 1341 aaKnown RBP15.65■□□□□ 0.1
CHMP2A-202ENST00000596708 ATAD2Q6PL18 1390 aa15.64■□□□□ 0.09
CHMP2A-202ENST00000596708 C14orf93Q9H972 538 aaKnown RBP15.64■□□□□ 0.09
CHMP2A-202ENST00000596708 DHX57Q6P158 1386 aaKnown RBP15.63■□□□□ 0.09
CHMP2A-202ENST00000596708 CFAP70Q5T0N1 1121 aa15.63■□□□□ 0.09
CHMP2A-202ENST00000596708 KRT28Q7Z3Y7 464 aa15.63■□□□□ 0.09
CHMP2A-202ENST00000596708 SIRT1Q96EB6 747 aa15.62■□□□□ 0.09
CHMP2A-202ENST00000596708 BCL9LQ86UU0 1499 aa15.61■□□□□ 0.09
CHMP2A-202ENST00000596708 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.61■□□□□ 0.09
CHMP2A-202ENST00000596708 HAP1P54257 671 aaPredicted RBP15.61■□□□□ 0.09
CHMP2A-202ENST00000596708 SAFB2Q14151 953 aaKnown RBP eCLIP15.61■□□□□ 0.09
CHMP2A-202ENST00000596708 SPATA31A3Q5VYP0 1347 aa15.61■□□□□ 0.09
CHMP2A-202ENST00000596708 PLEKHG5O94827 1062 aa15.6■□□□□ 0.09
CHMP2A-202ENST00000596708 PSME1Q06323 249 aa15.6■□□□□ 0.09
CHMP2A-202ENST00000596708 GJD4Q96KN9 370 aaPredicted RBP15.6■□□□□ 0.09
CHMP2A-202ENST00000596708 PHF8Q9UPP1 1060 aa15.6■□□□□ 0.09
CHMP2A-202ENST00000596708 POGKQ9P215 609 aa15.59■□□□□ 0.09
CHMP2A-202ENST00000596708 BRWD3Q6RI45 1802 aa15.59■□□□□ 0.09
CHMP2A-202ENST00000596708 LMOD2Q6P5Q4 547 aa15.58■□□□□ 0.08
CHMP2A-202ENST00000596708 UNC5CLQ8IV45 518 aa15.58■□□□□ 0.08
CHMP2A-202ENST00000596708 PRAM1Q96QH2 718 aa15.58■□□□□ 0.08
CHMP2A-202ENST00000596708 NRXN1Q9ULB1 1477 aa15.57■□□□□ 0.08
CHMP2A-202ENST00000596708 USP32Q8NFA0 1604 aa15.57■□□□□ 0.08
CHMP2A-202ENST00000596708 SLIT2O94813 1529 aa15.55■□□□□ 0.08
CHMP2A-202ENST00000596708 RAB3GAP2Q9H2M9 1393 aa15.55■□□□□ 0.08
CHMP2A-202ENST00000596708 PMFBP1Q8TBY8 1022 aa15.55■□□□□ 0.08
CHMP2A-202ENST00000596708 CABLES1Q8TDN4 633 aa15.55■□□□□ 0.08
CHMP2A-202ENST00000596708 PLCH1Q4KWH8 1693 aa15.54■□□□□ 0.08
CHMP2A-202ENST00000596708 GLI3P10071 1580 aa15.54■□□□□ 0.08
CHMP2A-202ENST00000596708 TNS3Q68CZ2 1445 aa15.54■□□□□ 0.08
CHMP2A-202ENST00000596708 CCDC125Q86Z20 511 aa15.54■□□□□ 0.08
CHMP2A-202ENST00000596708 TRAK1Q9UPV9 953 aa15.54■□□□□ 0.08
CHMP2A-202ENST00000596708 KDM2AQ9Y2K7 1162 aa15.54■□□□□ 0.08
CHMP2A-202ENST00000596708 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
CHMP2A-202ENST00000596708 ZRANB1Q9UGI0 708 aa15.53■□□□□ 0.08
CHMP2A-202ENST00000596708 CCDC9Q9Y3X0 531 aaKnown RBP15.53■□□□□ 0.08
CHMP2A-202ENST00000596708 NWD2Q9ULI1 1742 aa15.53■□□□□ 0.08
CHMP2A-202ENST00000596708 DLC1Q96QB1 1528 aa15.53■□□□□ 0.08
CHMP2A-202ENST00000596708 RALGAPBQ86X10 1494 aa15.52■□□□□ 0.08
CHMP2A-202ENST00000596708 SBNO1A3KN83 1393 aa15.51■□□□□ 0.07
CHMP2A-202ENST00000596708 DCAF11Q8TEB1 546 aa15.51■□□□□ 0.07
CHMP2A-202ENST00000596708 HIRIP3Q9BW71 556 aaPredicted RBP15.51■□□□□ 0.07
CHMP2A-202ENST00000596708 ARHGEF10O15013 1369 aa15.5■□□□□ 0.07
CHMP2A-202ENST00000596708 MINK1Q8N4C8 1332 aaPredicted RBP15.5■□□□□ 0.07
CHMP2A-202ENST00000596708 ANKARQ7Z5J8 1434 aa15.5■□□□□ 0.07
CHMP2A-202ENST00000596708 VPS72Q15906 364 aa15.49■□□□□ 0.07
CHMP2A-202ENST00000596708 SEPT12Q8IYM1 358 aa15.49■□□□□ 0.07
CHMP2A-202ENST00000596708 ADGRB1O14514 1584 aa15.49■□□□□ 0.07
CHMP2A-202ENST00000596708 ADGRB2O60241 1585 aa15.49■□□□□ 0.07
CHMP2A-202ENST00000596708 TRPM3Q9HCF6 1732 aaPredicted RBP15.48■□□□□ 0.07
CHMP2A-202ENST00000596708 GPRASP1Q5JY77 1395 aa15.48■□□□□ 0.07
CHMP2A-202ENST00000596708 FAM83GA6ND36 823 aa15.47■□□□□ 0.07
CHMP2A-202ENST00000596708 SF3B2Q13435 895 aaKnown RBP15.47■□□□□ 0.07
CHMP2A-202ENST00000596708 A0A0G2JS52 829 aa15.46■□□□□ 0.07
CHMP2A-202ENST00000596708 MYT1Q01538 1121 aa15.46■□□□□ 0.07
CHMP2A-202ENST00000596708 ALS2Q96Q42 1657 aa15.46■□□□□ 0.07
CHMP2A-202ENST00000596708 EIF3AQ14152 1382 aaKnown RBP15.46■□□□□ 0.07
CHMP2A-202ENST00000596708 BLMP54132 1417 aaPredicted RBP15.45■□□□□ 0.06
CHMP2A-202ENST00000596708 WASLO00401 505 aaPredicted RBP15.45■□□□□ 0.06
CHMP2A-202ENST00000596708 NGDNQ8NEJ9 315 aaKnown RBP15.45■□□□□ 0.06
CHMP2A-202ENST00000596708 STAC3Q96MF2 364 aa15.45■□□□□ 0.06
CHMP2A-202ENST00000596708 ITSN1Q15811 1721 aa15.45■□□□□ 0.06
CHMP2A-202ENST00000596708 ARHGEF28Q8N1W1 1705 aaKnown RBP15.45■□□□□ 0.06
CHMP2A-202ENST00000596708 TULP4Q9NRJ4 1543 aa15.44■□□□□ 0.06
CHMP2A-202ENST00000596708 NRAPQ86VF7 1730 aa15.44■□□□□ 0.06
CHMP2A-202ENST00000596708 PAK3O75914 559 aaPredicted RBP15.44■□□□□ 0.06
CHMP2A-202ENST00000596708 KRT27Q7Z3Y8 459 aa15.44■□□□□ 0.06
CHMP2A-202ENST00000596708 COL14A1Q05707 1796 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms