RNA–Protein interactions for RNA: ENST00000596386.1

PSMC4-204, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 2

Gene PSMC4, Length 929 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-204ENST00000596386 KNDC1Q76NI1 1749 aa23.33■■□□□ 1.32
PSMC4-204ENST00000596386 AFF2P51816 1311 aa23.33■■□□□ 1.32
PSMC4-204ENST00000596386 ABCC11Q96J66 1382 aa23.31■■□□□ 1.32
PSMC4-204ENST00000596386 STK26Q9P289 416 aa23.3■■□□□ 1.32
PSMC4-204ENST00000596386 RXRBP28702 533 aa23.29■■□□□ 1.32
PSMC4-204ENST00000596386 CDK12Q9NYV4 1490 aaPredicted RBP23.29■■□□□ 1.32
PSMC4-204ENST00000596386 C8orf37Q96NL8 207 aa23.28■■□□□ 1.32
PSMC4-204ENST00000596386 RAB3GAP2Q9H2M9 1393 aa23.27■■□□□ 1.32
PSMC4-204ENST00000596386 TMEM132EQ6IEE7 984 aa23.27■■□□□ 1.32
PSMC4-204ENST00000596386 WAPLQ7Z5K2 1190 aa23.27■■□□□ 1.32
PSMC4-204ENST00000596386 NRXN1Q9ULB1 1477 aa23.27■■□□□ 1.32
PSMC4-204ENST00000596386 YTHDC2Q9H6S0 1430 aaKnown RBP23.26■■□□□ 1.31
PSMC4-204ENST00000596386 MYOM2P54296 1465 aa23.26■■□□□ 1.31
PSMC4-204ENST00000596386 NPHP3Q7Z494 1330 aa23.26■■□□□ 1.31
PSMC4-204ENST00000596386 COL22A1Q8NFW1 1626 aaPredicted RBP23.26■■□□□ 1.31
PSMC4-204ENST00000596386 PLEKHH1Q9ULM0 1364 aa23.26■■□□□ 1.31
PSMC4-204ENST00000596386 ESCO1Q5FWF5 840 aa23.25■■□□□ 1.31
PSMC4-204ENST00000596386 PXDNQ92626 1479 aa23.24■■□□□ 1.31
PSMC4-204ENST00000596386 ADAMTS2O95450 1211 aa23.23■■□□□ 1.31
PSMC4-204ENST00000596386 C14orf93Q9H972 538 aaKnown RBP23.22■■□□□ 1.31
PSMC4-204ENST00000596386 FMN2Q9NZ56 1722 aa23.22■■□□□ 1.31
PSMC4-204ENST00000596386 NGLY1Q96IV0 654 aa23.2■■□□□ 1.3
PSMC4-204ENST00000596386 NUTM2FA1L443 756 aa23.19■■□□□ 1.3
PSMC4-204ENST00000596386 FOXO3O43524 673 aa23.19■■□□□ 1.3
PSMC4-204ENST00000596386 SIRT1Q96EB6 747 aa23.19■■□□□ 1.3
PSMC4-204ENST00000596386 QTRT2Q9H974 415 aaKnown RBP23.19■■□□□ 1.3
PSMC4-204ENST00000596386 RBM6P78332 1123 aaKnown RBP23.18■■□□□ 1.3
PSMC4-204ENST00000596386 UPF1Q92900 1129 aaKnown RBP eCLIP23.18■■□□□ 1.3
PSMC4-204ENST00000596386 RGS12O14924 1447 aa23.17■■□□□ 1.3
PSMC4-204ENST00000596386 DHX57Q6P158 1386 aaKnown RBP23.17■■□□□ 1.3
PSMC4-204ENST00000596386 KIF1AQ12756 1690 aa23.17■■□□□ 1.3
PSMC4-204ENST00000596386 CFAP70Q5T0N1 1121 aa23.17■■□□□ 1.3
PSMC4-204ENST00000596386 XPCQ01831 940 aaPredicted RBP23.16■■□□□ 1.3
PSMC4-204ENST00000596386 FNBP4Q8N3X1 1017 aaPredicted RBP23.14■■□□□ 1.29
PSMC4-204ENST00000596386 USP21Q9UK80 565 aa23.13■■□□□ 1.29
PSMC4-204ENST00000596386 DLC1Q96QB1 1528 aa23.13■■□□□ 1.29
PSMC4-204ENST00000596386 MARF1Q9Y4F3 1742 aaKnown RBP23.11■■□□□ 1.29
PSMC4-204ENST00000596386 ADGRB1O14514 1584 aa23.11■■□□□ 1.29
PSMC4-204ENST00000596386 PRAM1Q96QH2 718 aa23.1■■□□□ 1.29
PSMC4-204ENST00000596386 TRPC5Q9UL62 973 aaPredicted RBP23.1■■□□□ 1.29
PSMC4-204ENST00000596386 ATRNO75882 1429 aa23.09■■□□□ 1.29
PSMC4-204ENST00000596386 RGPD8O14715 1765 aaPredicted RBP23.09■■□□□ 1.29
PSMC4-204ENST00000596386 SPATA31A3Q5VYP0 1347 aa23.08■■□□□ 1.29
PSMC4-204ENST00000596386 ADGRB2O60241 1585 aa23.07■■□□□ 1.28
PSMC4-204ENST00000596386 HRCP23327 699 aa23.07■■□□□ 1.28
PSMC4-204ENST00000596386 SAFB2Q14151 953 aaKnown RBP eCLIP23.06■■□□□ 1.28
PSMC4-204ENST00000596386 BCL9LQ86UU0 1499 aa23.05■■□□□ 1.28
PSMC4-204ENST00000596386 KRT28Q7Z3Y7 464 aa23.05■■□□□ 1.28
PSMC4-204ENST00000596386 PHF8Q9UPP1 1060 aa23.05■■□□□ 1.28
PSMC4-204ENST00000596386 POGKQ9P215 609 aa23.04■■□□□ 1.28
PSMC4-204ENST00000596386 TNS3Q68CZ2 1445 aa23.04■■□□□ 1.28
PSMC4-204ENST00000596386 ANKARQ7Z5J8 1434 aa23.04■■□□□ 1.28
PSMC4-204ENST00000596386 DCAF11Q8TEB1 546 aa23.03■■□□□ 1.28
PSMC4-204ENST00000596386 USP32Q8NFA0 1604 aa23.03■■□□□ 1.28
PSMC4-204ENST00000596386 STAC3Q96MF2 364 aa23.02■■□□□ 1.28
PSMC4-204ENST00000596386 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.02■■□□□ 1.28
PSMC4-204ENST00000596386 KDM2AQ9Y2K7 1162 aa23.01■■□□□ 1.27
PSMC4-204ENST00000596386 PSME1Q06323 249 aa23■■□□□ 1.27
PSMC4-204ENST00000596386 TRAK1Q9UPV9 953 aa23■■□□□ 1.27
PSMC4-204ENST00000596386 SBNO1A3KN83 1393 aa23■■□□□ 1.27
PSMC4-204ENST00000596386 ATAD2Q6PL18 1390 aa23■■□□□ 1.27
PSMC4-204ENST00000596386 SLIT2O94813 1529 aa22.99■■□□□ 1.27
PSMC4-204ENST00000596386 EP400Q96L91 3159 aa22.98■■□□□ 1.27
PSMC4-204ENST00000596386 EIF3AQ14152 1382 aaKnown RBP22.97■■□□□ 1.27
PSMC4-204ENST00000596386 GJD4Q96KN9 370 aaPredicted RBP22.96■■□□□ 1.27
PSMC4-204ENST00000596386 HIRIP3Q9BW71 556 aaPredicted RBP22.96■■□□□ 1.27
PSMC4-204ENST00000596386 ARHGEF10O15013 1369 aa22.96■■□□□ 1.27
PSMC4-204ENST00000596386 ABCA3Q99758 1704 aa22.96■■□□□ 1.27
PSMC4-204ENST00000596386 UNC5CLQ8IV45 518 aa22.95■■□□□ 1.26
PSMC4-204ENST00000596386 PMFBP1Q8TBY8 1022 aa22.95■■□□□ 1.26
PSMC4-204ENST00000596386 TULP4Q9NRJ4 1543 aa22.95■■□□□ 1.26
PSMC4-204ENST00000596386 MINK1Q8N4C8 1332 aaPredicted RBP22.94■■□□□ 1.26
PSMC4-204ENST00000596386 ARHGEF28Q8N1W1 1705 aaKnown RBP22.94■■□□□ 1.26
PSMC4-204ENST00000596386 HAP1P54257 671 aaPredicted RBP22.93■■□□□ 1.26
PSMC4-204ENST00000596386 RALGAPBQ86X10 1494 aa22.92■■□□□ 1.26
PSMC4-204ENST00000596386 PRR36Q9H6K5 1346 aa22.92■■□□□ 1.26
PSMC4-204ENST00000596386 TRPM3Q9HCF6 1732 aaPredicted RBP22.92■■□□□ 1.26
PSMC4-204ENST00000596386 CABLES1Q8TDN4 633 aa22.92■■□□□ 1.26
PSMC4-204ENST00000596386 GLI3P10071 1580 aa22.92■■□□□ 1.26
PSMC4-204ENST00000596386 PLCH1Q4KWH8 1693 aa22.91■■□□□ 1.26
PSMC4-204ENST00000596386 WASLO00401 505 aaPredicted RBP22.91■■□□□ 1.26
PSMC4-204ENST00000596386 LMOD2Q6P5Q4 547 aa22.91■■□□□ 1.26
PSMC4-204ENST00000596386 NWD2Q9ULI1 1742 aa22.9■■□□□ 1.26
PSMC4-204ENST00000596386 GPRASP1Q5JY77 1395 aa22.89■■□□□ 1.25
PSMC4-204ENST00000596386 ALS2Q96Q42 1657 aa22.88■■□□□ 1.25
PSMC4-204ENST00000596386 PLEKHG5O94827 1062 aa22.88■■□□□ 1.25
PSMC4-204ENST00000596386 KIAA1210Q9ULL0 1709 aa22.86■■□□□ 1.25
PSMC4-204ENST00000596386 ATP7BP35670 1465 aa22.85■■□□□ 1.25
PSMC4-204ENST00000596386 ITSN1Q15811 1721 aa22.85■■□□□ 1.25
PSMC4-204ENST00000596386 VPS72Q15906 364 aa22.84■■□□□ 1.25
PSMC4-204ENST00000596386 NGDNQ8NEJ9 315 aaKnown RBP22.82■■□□□ 1.24
PSMC4-204ENST00000596386 FAM83GA6ND36 823 aa22.81■■□□□ 1.24
PSMC4-204ENST00000596386 CCDC125Q86Z20 511 aa22.81■■□□□ 1.24
PSMC4-204ENST00000596386 SRCAPQ6ZRS2 3230 aa22.81■■□□□ 1.24
PSMC4-204ENST00000596386 BRWD3Q6RI45 1802 aa22.8■■□□□ 1.24
PSMC4-204ENST00000596386 NRAPQ86VF7 1730 aa22.8■■□□□ 1.24
PSMC4-204ENST00000596386 CRYBG1Q9Y4K1 1723 aa22.8■■□□□ 1.24
PSMC4-204ENST00000596386 NUDT16Q96DE0 195 aaKnown RBP22.79■■□□□ 1.24
PSMC4-204ENST00000596386 COL14A1Q05707 1796 aaKnown RBP22.78■■□□□ 1.24
PSMC4-204ENST00000596386 TOPAZ1Q8N9V7 1692 aa22.78■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms