RNA–Protein interactions for RNA: ENST00000595756.1

HOMER3-208, Transcript of homer scaffold protein 3, humanhuman

TSL 2

Gene HOMER3, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-208ENST00000595756 COL22A1Q8NFW1 1626 aaPredicted RBP26.49■■□□□ 1.83
HOMER3-208ENST00000595756 YTHDC2Q9H6S0 1430 aaKnown RBP26.48■■□□□ 1.83
HOMER3-208ENST00000595756 FMN2Q9NZ56 1722 aa26.48■■□□□ 1.83
HOMER3-208ENST00000595756 SOS2Q07890 1332 aaPredicted RBP26.47■■□□□ 1.83
HOMER3-208ENST00000595756 NUTM2BA6NNL0 878 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-208ENST00000595756 NUTM2EB1AL46 878 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-208ENST00000595756 NUTM2AQ8IVF1 878 aaPredicted RBP26.46■■□□□ 1.83
HOMER3-208ENST00000595756 ORAI2Q96SN7 254 aa26.46■■□□□ 1.83
HOMER3-208ENST00000595756 KIF1AQ12756 1690 aa26.44■■□□□ 1.82
HOMER3-208ENST00000595756 STK26Q9P289 416 aa26.43■■□□□ 1.82
HOMER3-208ENST00000595756 PLEKHH1Q9ULM0 1364 aa26.43■■□□□ 1.82
HOMER3-208ENST00000595756 PXDNQ92626 1479 aa26.42■■□□□ 1.82
HOMER3-208ENST00000595756 TMEM132EQ6IEE7 984 aa26.42■■□□□ 1.82
HOMER3-208ENST00000595756 CDK12Q9NYV4 1490 aaPredicted RBP26.42■■□□□ 1.82
HOMER3-208ENST00000595756 C14orf93Q9H972 538 aaKnown RBP26.41■■□□□ 1.82
HOMER3-208ENST00000595756 AFF2P51816 1311 aa26.4■■□□□ 1.82
HOMER3-208ENST00000595756 WAPLQ7Z5K2 1190 aa26.4■■□□□ 1.82
HOMER3-208ENST00000595756 NPHP3Q7Z494 1330 aa26.39■■□□□ 1.82
HOMER3-208ENST00000595756 DLC1Q96QB1 1528 aa26.39■■□□□ 1.82
HOMER3-208ENST00000595756 SIRT1Q96EB6 747 aa26.38■■□□□ 1.81
HOMER3-208ENST00000595756 DHX57Q6P158 1386 aaKnown RBP26.37■■□□□ 1.81
HOMER3-208ENST00000595756 ADGRB1O14514 1584 aa26.37■■□□□ 1.81
HOMER3-208ENST00000595756 HRCP23327 699 aa26.36■■□□□ 1.81
HOMER3-208ENST00000595756 ESCO1Q5FWF5 840 aa26.36■■□□□ 1.81
HOMER3-208ENST00000595756 MARF1Q9Y4F3 1742 aaKnown RBP26.36■■□□□ 1.81
HOMER3-208ENST00000595756 ADGRB2O60241 1585 aa26.35■■□□□ 1.81
HOMER3-208ENST00000595756 C8orf37Q96NL8 207 aa26.34■■□□□ 1.81
HOMER3-208ENST00000595756 RXRBP28702 533 aa26.33■■□□□ 1.81
HOMER3-208ENST00000595756 CFAP70Q5T0N1 1121 aa26.33■■□□□ 1.81
HOMER3-208ENST00000595756 RGPD8O14715 1765 aaPredicted RBP26.32■■□□□ 1.8
HOMER3-208ENST00000595756 NUTM2FA1L443 756 aa26.27■■□□□ 1.8
HOMER3-208ENST00000595756 FOXO3O43524 673 aa26.27■■□□□ 1.8
HOMER3-208ENST00000595756 ADAMTS2O95450 1211 aa26.27■■□□□ 1.8
HOMER3-208ENST00000595756 USP32Q8NFA0 1604 aa26.26■■□□□ 1.79
HOMER3-208ENST00000595756 RGS12O14924 1447 aa26.26■■□□□ 1.79
HOMER3-208ENST00000595756 STAC3Q96MF2 364 aa26.25■■□□□ 1.79
HOMER3-208ENST00000595756 NGLY1Q96IV0 654 aa26.24■■□□□ 1.79
HOMER3-208ENST00000595756 PRAM1Q96QH2 718 aa26.24■■□□□ 1.79
HOMER3-208ENST00000595756 ANKARQ7Z5J8 1434 aa26.23■■□□□ 1.79
HOMER3-208ENST00000595756 RBM6P78332 1123 aaKnown RBP26.23■■□□□ 1.79
HOMER3-208ENST00000595756 QTRT2Q9H974 415 aaKnown RBP26.23■■□□□ 1.79
HOMER3-208ENST00000595756 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.22■■□□□ 1.79
HOMER3-208ENST00000595756 XPCQ01831 940 aaPredicted RBP26.22■■□□□ 1.79
HOMER3-208ENST00000595756 ARHGEF28Q8N1W1 1705 aaKnown RBP26.22■■□□□ 1.79
HOMER3-208ENST00000595756 FNBP4Q8N3X1 1017 aaPredicted RBP26.21■■□□□ 1.79
HOMER3-208ENST00000595756 DCAF11Q8TEB1 546 aa26.2■■□□□ 1.78
HOMER3-208ENST00000595756 TNS3Q68CZ2 1445 aa26.2■■□□□ 1.78
HOMER3-208ENST00000595756 ABCA3Q99758 1704 aa26.19■■□□□ 1.78
HOMER3-208ENST00000595756 SPATA31A3Q5VYP0 1347 aa26.19■■□□□ 1.78
HOMER3-208ENST00000595756 USP21Q9UK80 565 aa26.19■■□□□ 1.78
HOMER3-208ENST00000595756 ATRNO75882 1429 aa26.19■■□□□ 1.78
HOMER3-208ENST00000595756 UPF1Q92900 1129 aaKnown RBP eCLIP26.18■■□□□ 1.78
HOMER3-208ENST00000595756 POGKQ9P215 609 aa26.18■■□□□ 1.78
HOMER3-208ENST00000595756 KIAA1210Q9ULL0 1709 aa26.18■■□□□ 1.78
HOMER3-208ENST00000595756 SAFB2Q14151 953 aaKnown RBP eCLIP26.17■■□□□ 1.78
HOMER3-208ENST00000595756 PHF8Q9UPP1 1060 aa26.17■■□□□ 1.78
HOMER3-208ENST00000595756 TULP4Q9NRJ4 1543 aa26.17■■□□□ 1.78
HOMER3-208ENST00000595756 EIF3AQ14152 1382 aaKnown RBP26.17■■□□□ 1.78
HOMER3-208ENST00000595756 TRPC5Q9UL62 973 aaPredicted RBP26.16■■□□□ 1.78
HOMER3-208ENST00000595756 KDM2AQ9Y2K7 1162 aa26.15■■□□□ 1.78
HOMER3-208ENST00000595756 TRPM3Q9HCF6 1732 aaPredicted RBP26.14■■□□□ 1.78
HOMER3-208ENST00000595756 KRT28Q7Z3Y7 464 aa26.14■■□□□ 1.78
HOMER3-208ENST00000595756 TRAK1Q9UPV9 953 aa26.14■■□□□ 1.78
HOMER3-208ENST00000595756 SBNO1A3KN83 1393 aa26.14■■□□□ 1.78
HOMER3-208ENST00000595756 BCL9LQ86UU0 1499 aa26.14■■□□□ 1.78
HOMER3-208ENST00000595756 ITSN1Q15811 1721 aa26.14■■□□□ 1.77
HOMER3-208ENST00000595756 SLIT2O94813 1529 aa26.11■■□□□ 1.77
HOMER3-208ENST00000595756 PSME1Q06323 249 aa26.11■■□□□ 1.77
HOMER3-208ENST00000595756 ARHGEF10O15013 1369 aa26.1■■□□□ 1.77
HOMER3-208ENST00000595756 EP400Q96L91 3159 aa26.1■■□□□ 1.77
HOMER3-208ENST00000595756 PLCH1Q4KWH8 1693 aa26.09■■□□□ 1.77
HOMER3-208ENST00000595756 ALS2Q96Q42 1657 aa26.09■■□□□ 1.77
HOMER3-208ENST00000595756 NWD2Q9ULI1 1742 aa26.09■■□□□ 1.77
HOMER3-208ENST00000595756 MINK1Q8N4C8 1332 aaPredicted RBP26.07■■□□□ 1.76
HOMER3-208ENST00000595756 HIRIP3Q9BW71 556 aaPredicted RBP26.06■■□□□ 1.76
HOMER3-208ENST00000595756 PRR36Q9H6K5 1346 aa26.05■■□□□ 1.76
HOMER3-208ENST00000595756 ATAD2Q6PL18 1390 aa26.05■■□□□ 1.76
HOMER3-208ENST00000595756 ATP7BP35670 1465 aa26.04■■□□□ 1.76
HOMER3-208ENST00000595756 TOPAZ1Q8N9V7 1692 aa26.04■■□□□ 1.76
HOMER3-208ENST00000595756 WASLO00401 505 aaPredicted RBP26.04■■□□□ 1.76
HOMER3-208ENST00000595756 GLI3P10071 1580 aa26.03■■□□□ 1.76
HOMER3-208ENST00000595756 CRYBG1Q9Y4K1 1723 aa26.03■■□□□ 1.76
HOMER3-208ENST00000595756 TRIM26Q12899 539 aaPredicted RBP26.03■■□□□ 1.76
HOMER3-208ENST00000595756 PMFBP1Q8TBY8 1022 aa26.03■■□□□ 1.76
HOMER3-208ENST00000595756 RALGAPBQ86X10 1494 aa26■■□□□ 1.75
HOMER3-208ENST00000595756 GPRASP1Q5JY77 1395 aa26■■□□□ 1.75
HOMER3-208ENST00000595756 UNC5CLQ8IV45 518 aa26■■□□□ 1.75
HOMER3-208ENST00000595756 HAP1P54257 671 aaPredicted RBP25.99■■□□□ 1.75
HOMER3-208ENST00000595756 GJD4Q96KN9 370 aaPredicted RBP25.99■■□□□ 1.75
HOMER3-208ENST00000595756 NRAPQ86VF7 1730 aa25.98■■□□□ 1.75
HOMER3-208ENST00000595756 CABLES1Q8TDN4 633 aa25.96■■□□□ 1.75
HOMER3-208ENST00000595756 COL14A1Q05707 1796 aaKnown RBP25.95■■□□□ 1.75
HOMER3-208ENST00000595756 LMOD2Q6P5Q4 547 aa25.95■■□□□ 1.74
HOMER3-208ENST00000595756 BRWD3Q6RI45 1802 aa25.92■■□□□ 1.74
HOMER3-208ENST00000595756 QRICH2Q9H0J4 1663 aa25.92■■□□□ 1.74
HOMER3-208ENST00000595756 PHRF1Q9P1Y6 1649 aaKnown RBP25.92■■□□□ 1.74
HOMER3-208ENST00000595756 NGDNQ8NEJ9 315 aaKnown RBP25.9■■□□□ 1.74
HOMER3-208ENST00000595756 NUDT16Q96DE0 195 aaKnown RBP25.9■■□□□ 1.74
HOMER3-208ENST00000595756 TRPM1Q7Z4N2 1603 aa25.89■■□□□ 1.74
HOMER3-208ENST00000595756 VPS72Q15906 364 aa25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms