RNA–Protein interactions for RNA: ENST00000595529.1

LTBP4-213, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 5

Gene LTBP4, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-213ENST00000595529 VGFO15240 615 aaPredicted RBP21.72■■□□□ 1.07
LTBP4-213ENST00000595529 ROBO2Q9HCK4 1378 aa21.72■■□□□ 1.07
LTBP4-213ENST00000595529 SOS2Q07890 1332 aaPredicted RBP21.71■■□□□ 1.07
LTBP4-213ENST00000595529 RPGRIP1LQ68CZ1 1315 aa21.71■■□□□ 1.07
LTBP4-213ENST00000595529 NEUROD1Q13562 356 aa21.69■■□□□ 1.06
LTBP4-213ENST00000595529 NGLY1Q96IV0 654 aa21.68■■□□□ 1.06
LTBP4-213ENST00000595529 ADAMTS2O95450 1211 aa21.67■■□□□ 1.06
LTBP4-213ENST00000595529 ORAI2Q96SN7 254 aa21.67■■□□□ 1.06
LTBP4-213ENST00000595529 SRCAPQ6ZRS2 3230 aa21.66■■□□□ 1.06
LTBP4-213ENST00000595529 CCER1Q8TC90 406 aaPredicted RBP21.65■■□□□ 1.06
LTBP4-213ENST00000595529 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
LTBP4-213ENST00000595529 COL22A1Q8NFW1 1626 aaPredicted RBP21.64■■□□□ 1.05
LTBP4-213ENST00000595529 FNBP4Q8N3X1 1017 aaPredicted RBP21.63■■□□□ 1.05
LTBP4-213ENST00000595529 USP21Q9UK80 565 aa21.62■■□□□ 1.05
LTBP4-213ENST00000595529 TRPC5Q9UL62 973 aaPredicted RBP21.62■■□□□ 1.05
LTBP4-213ENST00000595529 SPATA31E1Q6ZUB1 1445 aa21.62■■□□□ 1.05
LTBP4-213ENST00000595529 ATAD2Q6PL18 1390 aa21.61■■□□□ 1.05
LTBP4-213ENST00000595529 PPLO60437 1756 aa21.61■■□□□ 1.05
LTBP4-213ENST00000595529 CDC42BPGQ6DT37 1551 aa21.61■■□□□ 1.05
LTBP4-213ENST00000595529 MYOM2P54296 1465 aa21.6■■□□□ 1.05
LTBP4-213ENST00000595529 DCAF11Q8TEB1 546 aa21.6■■□□□ 1.05
LTBP4-213ENST00000595529 KDM2AQ9Y2K7 1162 aa21.6■■□□□ 1.05
LTBP4-213ENST00000595529 ATRNO75882 1429 aa21.6■■□□□ 1.05
LTBP4-213ENST00000595529 NPHP3Q7Z494 1330 aa21.58■■□□□ 1.05
LTBP4-213ENST00000595529 STAC3Q96MF2 364 aa21.58■■□□□ 1.05
LTBP4-213ENST00000595529 PXDNQ92626 1479 aa21.57■■□□□ 1.04
LTBP4-213ENST00000595529 EP400Q96L91 3159 aa21.56■■□□□ 1.04
LTBP4-213ENST00000595529 ESCO1Q5FWF5 840 aa21.55■■□□□ 1.04
LTBP4-213ENST00000595529 CLSPNQ9HAW4 1339 aa21.55■■□□□ 1.04
LTBP4-213ENST00000595529 TECPR2O15040 1411 aa21.54■■□□□ 1.04
LTBP4-213ENST00000595529 BCL9LQ86UU0 1499 aa21.53■■□□□ 1.04
LTBP4-213ENST00000595529 ADGRF5Q8IZF2 1346 aa21.53■■□□□ 1.04
LTBP4-213ENST00000595529 LRPPRCP42704 1394 aaKnown RBP21.51■■□□□ 1.03
LTBP4-213ENST00000595529 L3MBTL2Q969R5 705 aa21.51■■□□□ 1.03
LTBP4-213ENST00000595529 MARF1Q9Y4F3 1742 aaKnown RBP21.5■■□□□ 1.03
LTBP4-213ENST00000595529 FOXO3O43524 673 aa21.5■■□□□ 1.03
LTBP4-213ENST00000595529 TONSLQ96HA7 1378 aa21.49■■□□□ 1.03
LTBP4-213ENST00000595529 ABCC11Q96J66 1382 aa21.48■■□□□ 1.03
LTBP4-213ENST00000595529 CCDC125Q86Z20 511 aa21.48■■□□□ 1.03
LTBP4-213ENST00000595529 XPCQ01831 940 aaPredicted RBP21.46■■□□□ 1.03
LTBP4-213ENST00000595529 WAPLQ7Z5K2 1190 aa21.46■■□□□ 1.03
LTBP4-213ENST00000595529 GJD4Q96KN9 370 aaPredicted RBP21.46■■□□□ 1.03
LTBP4-213ENST00000595529 KNDC1Q76NI1 1749 aa21.46■■□□□ 1.03
LTBP4-213ENST00000595529 STK26Q9P289 416 aa21.45■■□□□ 1.02
LTBP4-213ENST00000595529 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.45■■□□□ 1.02
LTBP4-213ENST00000595529 IFT172Q9UG01 1749 aa21.45■■□□□ 1.02
LTBP4-213ENST00000595529 ZRANB1Q9UGI0 708 aa21.44■■□□□ 1.02
LTBP4-213ENST00000595529 PIK3C2GO75747 1445 aa21.44■■□□□ 1.02
LTBP4-213ENST00000595529 CFAP70Q5T0N1 1121 aa21.43■■□□□ 1.02
LTBP4-213ENST00000595529 C14orf93Q9H972 538 aaKnown RBP21.43■■□□□ 1.02
LTBP4-213ENST00000595529 SLIT2O94813 1529 aa21.43■■□□□ 1.02
LTBP4-213ENST00000595529 KIF1AQ12756 1690 aa21.43■■□□□ 1.02
LTBP4-213ENST00000595529 SPATA31A3Q5VYP0 1347 aa21.42■■□□□ 1.02
LTBP4-213ENST00000595529 FMN2Q9NZ56 1722 aa21.42■■□□□ 1.02
LTBP4-213ENST00000595529 PLEKHH1Q9ULM0 1364 aa21.42■■□□□ 1.02
LTBP4-213ENST00000595529 NUTM2FA1L443 756 aa21.41■■□□□ 1.02
LTBP4-213ENST00000595529 UNC5CLQ8IV45 518 aa21.41■■□□□ 1.02
LTBP4-213ENST00000595529 TIMELESSQ9UNS1 1208 aa21.41■■□□□ 1.02
LTBP4-213ENST00000595529 YTHDC2Q9H6S0 1430 aaKnown RBP21.4■■□□□ 1.02
LTBP4-213ENST00000595529 TMEM132EQ6IEE7 984 aa21.4■■□□□ 1.02
LTBP4-213ENST00000595529 SIRT1Q96EB6 747 aa21.4■■□□□ 1.02
LTBP4-213ENST00000595529 RALGAPBQ86X10 1494 aa21.39■■□□□ 1.02
LTBP4-213ENST00000595529 GLI3P10071 1580 aa21.39■■□□□ 1.01
LTBP4-213ENST00000595529 USP32Q8NFA0 1604 aa21.38■■□□□ 1.01
LTBP4-213ENST00000595529 NRXN1Q9ULB1 1477 aa21.37■■□□□ 1.01
LTBP4-213ENST00000595529 KRT28Q7Z3Y7 464 aa21.36■■□□□ 1.01
LTBP4-213ENST00000595529 BLMP54132 1417 aaPredicted RBP21.35■■□□□ 1.01
LTBP4-213ENST00000595529 TNS3Q68CZ2 1445 aa21.35■■□□□ 1.01
LTBP4-213ENST00000595529 PHF8Q9UPP1 1060 aa21.33■■□□□ 1.01
LTBP4-213ENST00000595529 SBNO1A3KN83 1393 aa21.32■■□□□ 1
LTBP4-213ENST00000595529 PSME1Q06323 249 aa21.31■■□□□ 1
LTBP4-213ENST00000595529 VPS72Q15906 364 aa21.3■■□□□ 1
LTBP4-213ENST00000595529 NWD2Q9ULI1 1742 aa21.29■■□□□ 1
LTBP4-213ENST00000595529 ONECUT3O60422 494 aaPredicted RBP21.29■■□□□ 1
LTBP4-213ENST00000595529 RGPD8O14715 1765 aaPredicted RBP21.28■■□□□ 1
LTBP4-213ENST00000595529 ARHGEF10O15013 1369 aa21.28■■□□□ 1
LTBP4-213ENST00000595529 BRWD3Q6RI45 1802 aa21.28■■□□□ 1
LTBP4-213ENST00000595529 HAP1P54257 671 aaPredicted RBP21.28■■□□□ 1
LTBP4-213ENST00000595529 NBPF1Q3BBV0 1214 aa21.28■■□□□ 1
LTBP4-213ENST00000595529 NBPF8Q3BBV2 869 aa21.28■■□□□ 1
LTBP4-213ENST00000595529 SEPT12Q8IYM1 358 aa21.28■■□□□ 1
LTBP4-213ENST00000595529 TRAK1Q9UPV9 953 aa21.28■■□□□ 1
LTBP4-213ENST00000595529 PLCH1Q4KWH8 1693 aa21.27■■□□□ 1
LTBP4-213ENST00000595529 ABCA3Q99758 1704 aa21.26■□□□□ 0.99
LTBP4-213ENST00000595529 CABLES1Q8TDN4 633 aa21.26■□□□□ 0.99
LTBP4-213ENST00000595529 POGKQ9P215 609 aa21.26■□□□□ 0.99
LTBP4-213ENST00000595529 ANKARQ7Z5J8 1434 aa21.26■□□□□ 0.99
LTBP4-213ENST00000595529 PRAM1Q96QH2 718 aa21.25■□□□□ 0.99
LTBP4-213ENST00000595529 DLC1Q96QB1 1528 aa21.24■□□□□ 0.99
LTBP4-213ENST00000595529 ROCK2O75116 1388 aaKnown RBP21.23■□□□□ 0.99
LTBP4-213ENST00000595529 SF3B2Q13435 895 aaKnown RBP21.23■□□□□ 0.99
LTBP4-213ENST00000595529 DEFB132Q7Z7B7 95 aa21.23■□□□□ 0.99
LTBP4-213ENST00000595529 ADGRB2O60241 1585 aa21.23■□□□□ 0.99
LTBP4-213ENST00000595529 FAM83GA6ND36 823 aa21.21■□□□□ 0.99
LTBP4-213ENST00000595529 SAFB2Q14151 953 aaKnown RBP eCLIP21.21■□□□□ 0.99
LTBP4-213ENST00000595529 LMOD2Q6P5Q4 547 aa21.21■□□□□ 0.99
LTBP4-213ENST00000595529 KRT27Q7Z3Y8 459 aa21.21■□□□□ 0.99
LTBP4-213ENST00000595529 CARD11Q9BXL7 1154 aa21.21■□□□□ 0.99
LTBP4-213ENST00000595529 CCDC9Q9Y3X0 531 aaKnown RBP21.21■□□□□ 0.99
LTBP4-213ENST00000595529 ADGRB1O14514 1584 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms