RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 RBM6P78332 1123 aaKnown RBP26.16■■□□□ 1.78
SHKBP1-203ENST00000594298 QTRT2Q9H974 415 aaKnown RBP26.16■■□□□ 1.78
SHKBP1-203ENST00000594298 ADAMTS2O95450 1211 aa26.14■■□□□ 1.78
SHKBP1-203ENST00000594298 LRPPRCP42704 1394 aaKnown RBP26.13■■□□□ 1.77
SHKBP1-203ENST00000594298 RGL3Q3MIN7 710 aa26.13■■□□□ 1.77
SHKBP1-203ENST00000594298 NGLY1Q96IV0 654 aa26.13■■□□□ 1.77
SHKBP1-203ENST00000594298 RGS12O14924 1447 aa26.12■■□□□ 1.77
SHKBP1-203ENST00000594298 NPHP3Q7Z494 1330 aa26.12■■□□□ 1.77
SHKBP1-203ENST00000594298 ABCC11Q96J66 1382 aa26.11■■□□□ 1.77
SHKBP1-203ENST00000594298 ACIN1Q9UKV3 1341 aaKnown RBP26.11■■□□□ 1.77
SHKBP1-203ENST00000594298 ESCO1Q5FWF5 840 aa26.1■■□□□ 1.77
SHKBP1-203ENST00000594298 PIK3C2GO75747 1445 aa26.1■■□□□ 1.77
SHKBP1-203ENST00000594298 COL22A1Q8NFW1 1626 aaPredicted RBP26.1■■□□□ 1.77
SHKBP1-203ENST00000594298 IFT172Q9UG01 1749 aa26.08■■□□□ 1.77
SHKBP1-203ENST00000594298 FNBP4Q8N3X1 1017 aaPredicted RBP26.08■■□□□ 1.77
SHKBP1-203ENST00000594298 PXDNQ92626 1479 aa26.08■■□□□ 1.77
SHKBP1-203ENST00000594298 WAPLQ7Z5K2 1190 aa26.07■■□□□ 1.76
SHKBP1-203ENST00000594298 STK26Q9P289 416 aa26.07■■□□□ 1.76
SHKBP1-203ENST00000594298 MYOM2P54296 1465 aa26.06■■□□□ 1.76
SHKBP1-203ENST00000594298 USP21Q9UK80 565 aa26.06■■□□□ 1.76
SHKBP1-203ENST00000594298 TMEM132EQ6IEE7 984 aa26.05■■□□□ 1.76
SHKBP1-203ENST00000594298 FOXO3O43524 673 aa26.04■■□□□ 1.76
SHKBP1-203ENST00000594298 TRPC5Q9UL62 973 aaPredicted RBP26.04■■□□□ 1.76
SHKBP1-203ENST00000594298 KNDC1Q76NI1 1749 aa26.04■■□□□ 1.76
SHKBP1-203ENST00000594298 SIRT1Q96EB6 747 aa26.03■■□□□ 1.76
SHKBP1-203ENST00000594298 PLEKHH1Q9ULM0 1364 aa26.03■■□□□ 1.76
SHKBP1-203ENST00000594298 YTHDC2Q9H6S0 1430 aaKnown RBP26.03■■□□□ 1.76
SHKBP1-203ENST00000594298 ATRNO75882 1429 aa26■■□□□ 1.75
SHKBP1-203ENST00000594298 C14orf93Q9H972 538 aaKnown RBP26■■□□□ 1.75
SHKBP1-203ENST00000594298 NRXN1Q9ULB1 1477 aa25.99■■□□□ 1.75
SHKBP1-203ENST00000594298 NUTM2FA1L443 756 aa25.98■■□□□ 1.75
SHKBP1-203ENST00000594298 XPCQ01831 940 aaPredicted RBP25.98■■□□□ 1.75
SHKBP1-203ENST00000594298 BCL9LQ86UU0 1499 aa25.96■■□□□ 1.75
SHKBP1-203ENST00000594298 ATAD2Q6PL18 1390 aa25.95■■□□□ 1.75
SHKBP1-203ENST00000594298 FMN2Q9NZ56 1722 aa25.95■■□□□ 1.74
SHKBP1-203ENST00000594298 SPATA31A3Q5VYP0 1347 aa25.93■■□□□ 1.74
SHKBP1-203ENST00000594298 DHX57Q6P158 1386 aaKnown RBP25.93■■□□□ 1.74
SHKBP1-203ENST00000594298 KIF1AQ12756 1690 aa25.93■■□□□ 1.74
SHKBP1-203ENST00000594298 CFAP70Q5T0N1 1121 aa25.92■■□□□ 1.74
SHKBP1-203ENST00000594298 MARF1Q9Y4F3 1742 aaKnown RBP25.88■■□□□ 1.73
SHKBP1-203ENST00000594298 KRT28Q7Z3Y7 464 aa25.88■■□□□ 1.73
SHKBP1-203ENST00000594298 RAB3GAP2Q9H2M9 1393 aa25.87■■□□□ 1.73
SHKBP1-203ENST00000594298 GJD4Q96KN9 370 aaPredicted RBP25.87■■□□□ 1.73
SHKBP1-203ENST00000594298 PHF8Q9UPP1 1060 aa25.87■■□□□ 1.73
SHKBP1-203ENST00000594298 SLIT2O94813 1529 aa25.85■■□□□ 1.73
SHKBP1-203ENST00000594298 DLC1Q96QB1 1528 aa25.85■■□□□ 1.73
SHKBP1-203ENST00000594298 PRAM1Q96QH2 718 aa25.85■■□□□ 1.73
SHKBP1-203ENST00000594298 PSME1Q06323 249 aa25.84■■□□□ 1.73
SHKBP1-203ENST00000594298 UNC5CLQ8IV45 518 aa25.84■■□□□ 1.73
SHKBP1-203ENST00000594298 TNS3Q68CZ2 1445 aa25.83■■□□□ 1.73
SHKBP1-203ENST00000594298 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.83■■□□□ 1.72
SHKBP1-203ENST00000594298 SBNO1A3KN83 1393 aa25.82■■□□□ 1.72
SHKBP1-203ENST00000594298 USP32Q8NFA0 1604 aa25.81■■□□□ 1.72
SHKBP1-203ENST00000594298 ANKARQ7Z5J8 1434 aa25.8■■□□□ 1.72
SHKBP1-203ENST00000594298 CCDC125Q86Z20 511 aa25.8■■□□□ 1.72
SHKBP1-203ENST00000594298 ADGRB1O14514 1584 aa25.8■■□□□ 1.72
SHKBP1-203ENST00000594298 SAFB2Q14151 953 aaKnown RBP eCLIP25.79■■□□□ 1.72
SHKBP1-203ENST00000594298 POGKQ9P215 609 aa25.79■■□□□ 1.72
SHKBP1-203ENST00000594298 RALGAPBQ86X10 1494 aa25.78■■□□□ 1.72
SHKBP1-203ENST00000594298 ADGRB2O60241 1585 aa25.78■■□□□ 1.72
SHKBP1-203ENST00000594298 ARHGEF10O15013 1369 aa25.77■■□□□ 1.72
SHKBP1-203ENST00000594298 RGPD8O14715 1765 aaPredicted RBP25.75■■□□□ 1.71
SHKBP1-203ENST00000594298 GLI3P10071 1580 aa25.75■■□□□ 1.71
SHKBP1-203ENST00000594298 STAC3Q96MF2 364 aa25.75■■□□□ 1.71
SHKBP1-203ENST00000594298 HAP1P54257 671 aaPredicted RBP25.74■■□□□ 1.71
SHKBP1-203ENST00000594298 CABLES1Q8TDN4 633 aa25.73■■□□□ 1.71
SHKBP1-203ENST00000594298 VPS72Q15906 364 aa25.72■■□□□ 1.71
SHKBP1-203ENST00000594298 TRAK1Q9UPV9 953 aa25.72■■□□□ 1.71
SHKBP1-203ENST00000594298 EIF3AQ14152 1382 aaKnown RBP25.71■■□□□ 1.71
SHKBP1-203ENST00000594298 HRCP23327 699 aa25.71■■□□□ 1.71
SHKBP1-203ENST00000594298 PMFBP1Q8TBY8 1022 aa25.71■■□□□ 1.71
SHKBP1-203ENST00000594298 DCAF11Q8TEB1 546 aa25.7■■□□□ 1.7
SHKBP1-203ENST00000594298 LMOD2Q6P5Q4 547 aa25.69■■□□□ 1.7
SHKBP1-203ENST00000594298 EP400Q96L91 3159 aa25.69■■□□□ 1.7
SHKBP1-203ENST00000594298 KDM2AQ9Y2K7 1162 aa25.68■■□□□ 1.7
SHKBP1-203ENST00000594298 ONECUT3O60422 494 aaPredicted RBP25.67■■□□□ 1.7
SHKBP1-203ENST00000594298 ABCA3Q99758 1704 aa25.67■■□□□ 1.7
SHKBP1-203ENST00000594298 HIRIP3Q9BW71 556 aaPredicted RBP25.67■■□□□ 1.7
SHKBP1-203ENST00000594298 ZRANB1Q9UGI0 708 aa25.67■■□□□ 1.7
SHKBP1-203ENST00000594298 NWD2Q9ULI1 1742 aa25.67■■□□□ 1.7
SHKBP1-203ENST00000594298 TULP4Q9NRJ4 1543 aa25.67■■□□□ 1.7
SHKBP1-203ENST00000594298 MINK1Q8N4C8 1332 aaPredicted RBP25.66■■□□□ 1.7
SHKBP1-203ENST00000594298 PRR36Q9H6K5 1346 aa25.66■■□□□ 1.7
SHKBP1-203ENST00000594298 BLMP54132 1417 aaPredicted RBP25.66■■□□□ 1.7
SHKBP1-203ENST00000594298 WASLO00401 505 aaPredicted RBP25.66■■□□□ 1.7
SHKBP1-203ENST00000594298 GPRASP1Q5JY77 1395 aa25.66■■□□□ 1.7
SHKBP1-203ENST00000594298 FAM83GA6ND36 823 aa25.65■■□□□ 1.7
SHKBP1-203ENST00000594298 SEPT12Q8IYM1 358 aa25.65■■□□□ 1.7
SHKBP1-203ENST00000594298 PLCH1Q4KWH8 1693 aa25.64■■□□□ 1.7
SHKBP1-203ENST00000594298 TRPM3Q9HCF6 1732 aaPredicted RBP25.64■■□□□ 1.7
SHKBP1-203ENST00000594298 PLEKHG5O94827 1062 aa25.63■■□□□ 1.69
SHKBP1-203ENST00000594298 CCDC9Q9Y3X0 531 aaKnown RBP25.61■■□□□ 1.69
SHKBP1-203ENST00000594298 ALS2Q96Q42 1657 aa25.6■■□□□ 1.69
SHKBP1-203ENST00000594298 KRT27Q7Z3Y8 459 aa25.57■■□□□ 1.68
SHKBP1-203ENST00000594298 NGDNQ8NEJ9 315 aaKnown RBP25.57■■□□□ 1.68
SHKBP1-203ENST00000594298 BRWD3Q6RI45 1802 aa25.56■■□□□ 1.68
SHKBP1-203ENST00000594298 BTG4Q9NY30 223 aa25.56■■□□□ 1.68
SHKBP1-203ENST00000594298 NRAPQ86VF7 1730 aa25.55■■□□□ 1.68
SHKBP1-203ENST00000594298 ATP7BP35670 1465 aa25.54■■□□□ 1.68
SHKBP1-203ENST00000594298 SF3B2Q13435 895 aaKnown RBP25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms