RNA–Protein interactions for RNA: ENST00000594235.1

SIN3B-203, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 1 (best)

Gene SIN3B, Length 923 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-203ENST00000594235 ACIN1Q9UKV3 1341 aaKnown RBP28.4■■■□□ 2.14
SIN3B-203ENST00000594235 RXRBP28702 533 aa28.38■■■□□ 2.13
SIN3B-203ENST00000594235 STK26Q9P289 416 aa28.38■■■□□ 2.13
SIN3B-203ENST00000594235 ABCC11Q96J66 1382 aa28.37■■■□□ 2.13
SIN3B-203ENST00000594235 TMEM132EQ6IEE7 984 aa28.37■■■□□ 2.13
SIN3B-203ENST00000594235 WAPLQ7Z5K2 1190 aa28.37■■■□□ 2.13
SIN3B-203ENST00000594235 C8orf37Q96NL8 207 aa28.37■■■□□ 2.13
SIN3B-203ENST00000594235 PLEKHH1Q9ULM0 1364 aa28.34■■■□□ 2.13
SIN3B-203ENST00000594235 CDK12Q9NYV4 1490 aaPredicted RBP28.34■■■□□ 2.13
SIN3B-203ENST00000594235 KNDC1Q76NI1 1749 aa28.33■■■□□ 2.13
SIN3B-203ENST00000594235 ESCO1Q5FWF5 840 aa28.32■■■□□ 2.12
SIN3B-203ENST00000594235 RAB3GAP2Q9H2M9 1393 aa28.32■■■□□ 2.12
SIN3B-203ENST00000594235 ADAMTS2O95450 1211 aa28.31■■■□□ 2.12
SIN3B-203ENST00000594235 YTHDC2Q9H6S0 1430 aaKnown RBP28.31■■■□□ 2.12
SIN3B-203ENST00000594235 NRXN1Q9ULB1 1477 aa28.31■■■□□ 2.12
SIN3B-203ENST00000594235 NPHP3Q7Z494 1330 aa28.3■■■□□ 2.12
SIN3B-203ENST00000594235 PXDNQ92626 1479 aa28.29■■■□□ 2.12
SIN3B-203ENST00000594235 MYOM2P54296 1465 aa28.28■■■□□ 2.12
SIN3B-203ENST00000594235 C14orf93Q9H972 538 aaKnown RBP28.28■■■□□ 2.12
SIN3B-203ENST00000594235 UPF1Q92900 1129 aaKnown RBP eCLIP28.27■■■□□ 2.12
SIN3B-203ENST00000594235 NGLY1Q96IV0 654 aa28.27■■■□□ 2.12
SIN3B-203ENST00000594235 QTRT2Q9H974 415 aaKnown RBP28.27■■■□□ 2.12
SIN3B-203ENST00000594235 COL22A1Q8NFW1 1626 aaPredicted RBP28.27■■■□□ 2.12
SIN3B-203ENST00000594235 NUTM2FA1L443 756 aa28.26■■■□□ 2.11
SIN3B-203ENST00000594235 FOXO3O43524 673 aa28.26■■■□□ 2.11
SIN3B-203ENST00000594235 RBM6P78332 1123 aaKnown RBP28.24■■■□□ 2.11
SIN3B-203ENST00000594235 CFAP70Q5T0N1 1121 aa28.24■■■□□ 2.11
SIN3B-203ENST00000594235 SIRT1Q96EB6 747 aa28.24■■■□□ 2.11
SIN3B-203ENST00000594235 XPCQ01831 940 aaPredicted RBP28.23■■■□□ 2.11
SIN3B-203ENST00000594235 RGS12O14924 1447 aa28.23■■■□□ 2.11
SIN3B-203ENST00000594235 FMN2Q9NZ56 1722 aa28.21■■■□□ 2.11
SIN3B-203ENST00000594235 DHX57Q6P158 1386 aaKnown RBP28.2■■■□□ 2.1
SIN3B-203ENST00000594235 FNBP4Q8N3X1 1017 aaPredicted RBP28.19■■■□□ 2.1
SIN3B-203ENST00000594235 USP21Q9UK80 565 aa28.18■■■□□ 2.1
SIN3B-203ENST00000594235 KIF1AQ12756 1690 aa28.14■■■□□ 2.1
SIN3B-203ENST00000594235 TRPC5Q9UL62 973 aaPredicted RBP28.14■■■□□ 2.1
SIN3B-203ENST00000594235 PRAM1Q96QH2 718 aa28.13■■■□□ 2.09
SIN3B-203ENST00000594235 ATRNO75882 1429 aa28.12■■■□□ 2.09
SIN3B-203ENST00000594235 SPATA31A3Q5VYP0 1347 aa28.12■■■□□ 2.09
SIN3B-203ENST00000594235 DLC1Q96QB1 1528 aa28.12■■■□□ 2.09
SIN3B-203ENST00000594235 ADGRB1O14514 1584 aa28.11■■■□□ 2.09
SIN3B-203ENST00000594235 SAFB2Q14151 953 aaKnown RBP eCLIP28.1■■■□□ 2.09
SIN3B-203ENST00000594235 BCL9LQ86UU0 1499 aa28.09■■■□□ 2.09
SIN3B-203ENST00000594235 KRT28Q7Z3Y7 464 aa28.08■■■□□ 2.09
SIN3B-203ENST00000594235 PHF8Q9UPP1 1060 aa28.08■■■□□ 2.09
SIN3B-203ENST00000594235 HRCP23327 699 aa28.07■■■□□ 2.08
SIN3B-203ENST00000594235 MARF1Q9Y4F3 1742 aaKnown RBP28.06■■■□□ 2.08
SIN3B-203ENST00000594235 RGPD8O14715 1765 aaPredicted RBP28.06■■■□□ 2.08
SIN3B-203ENST00000594235 POGKQ9P215 609 aa28.05■■■□□ 2.08
SIN3B-203ENST00000594235 DCAF11Q8TEB1 546 aa28.04■■■□□ 2.08
SIN3B-203ENST00000594235 KDM2AQ9Y2K7 1162 aa28.04■■■□□ 2.08
SIN3B-203ENST00000594235 ADGRB2O60241 1585 aa28.03■■■□□ 2.08
SIN3B-203ENST00000594235 TNS3Q68CZ2 1445 aa28.03■■■□□ 2.08
SIN3B-203ENST00000594235 TRAK1Q9UPV9 953 aa28.02■■■□□ 2.08
SIN3B-203ENST00000594235 ANKARQ7Z5J8 1434 aa28.01■■■□□ 2.08
SIN3B-203ENST00000594235 USP32Q8NFA0 1604 aa28.01■■■□□ 2.07
SIN3B-203ENST00000594235 PSME1Q06323 249 aa28■■■□□ 2.07
SIN3B-203ENST00000594235 SBNO1A3KN83 1393 aa27.99■■■□□ 2.07
SIN3B-203ENST00000594235 ATAD2Q6PL18 1390 aa27.99■■■□□ 2.07
SIN3B-203ENST00000594235 SLIT2O94813 1529 aa27.99■■■□□ 2.07
SIN3B-203ENST00000594235 STAC3Q96MF2 364 aa27.99■■■□□ 2.07
SIN3B-203ENST00000594235 EP400Q96L91 3159 aa27.98■■■□□ 2.07
SIN3B-203ENST00000594235 GJD4Q96KN9 370 aaPredicted RBP27.97■■■□□ 2.07
SIN3B-203ENST00000594235 HIRIP3Q9BW71 556 aaPredicted RBP27.97■■■□□ 2.07
SIN3B-203ENST00000594235 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.97■■■□□ 2.07
SIN3B-203ENST00000594235 PMFBP1Q8TBY8 1022 aa27.96■■■□□ 2.07
SIN3B-203ENST00000594235 UNC5CLQ8IV45 518 aa27.95■■■□□ 2.06
SIN3B-203ENST00000594235 MINK1Q8N4C8 1332 aaPredicted RBP27.94■■■□□ 2.06
SIN3B-203ENST00000594235 CABLES1Q8TDN4 633 aa27.94■■■□□ 2.06
SIN3B-203ENST00000594235 PRR36Q9H6K5 1346 aa27.93■■■□□ 2.06
SIN3B-203ENST00000594235 ARHGEF10O15013 1369 aa27.93■■■□□ 2.06
SIN3B-203ENST00000594235 RALGAPBQ86X10 1494 aa27.91■■■□□ 2.06
SIN3B-203ENST00000594235 EIF3AQ14152 1382 aaKnown RBP27.91■■■□□ 2.06
SIN3B-203ENST00000594235 TULP4Q9NRJ4 1543 aa27.91■■■□□ 2.06
SIN3B-203ENST00000594235 GLI3P10071 1580 aa27.9■■■□□ 2.06
SIN3B-203ENST00000594235 WASLO00401 505 aaPredicted RBP27.9■■■□□ 2.06
SIN3B-203ENST00000594235 HAP1P54257 671 aaPredicted RBP27.9■■■□□ 2.06
SIN3B-203ENST00000594235 LMOD2Q6P5Q4 547 aa27.9■■■□□ 2.06
SIN3B-203ENST00000594235 PLEKHG5O94827 1062 aa27.89■■■□□ 2.06
SIN3B-203ENST00000594235 ABCA3Q99758 1704 aa27.89■■■□□ 2.05
SIN3B-203ENST00000594235 TRPM3Q9HCF6 1732 aaPredicted RBP27.87■■■□□ 2.05
SIN3B-203ENST00000594235 ARHGEF28Q8N1W1 1705 aaKnown RBP27.86■■■□□ 2.05
SIN3B-203ENST00000594235 GPRASP1Q5JY77 1395 aa27.85■■■□□ 2.05
SIN3B-203ENST00000594235 VPS72Q15906 364 aa27.83■■■□□ 2.05
SIN3B-203ENST00000594235 PLCH1Q4KWH8 1693 aa27.83■■■□□ 2.05
SIN3B-203ENST00000594235 SRCAPQ6ZRS2 3230 aa27.83■■■□□ 2.05
SIN3B-203ENST00000594235 ALS2Q96Q42 1657 aa27.82■■■□□ 2.04
SIN3B-203ENST00000594235 NWD2Q9ULI1 1742 aa27.82■■■□□ 2.04
SIN3B-203ENST00000594235 FAM83GA6ND36 823 aa27.81■■■□□ 2.04
SIN3B-203ENST00000594235 ATP7BP35670 1465 aa27.81■■■□□ 2.04
SIN3B-203ENST00000594235 NGDNQ8NEJ9 315 aaKnown RBP27.78■■■□□ 2.04
SIN3B-203ENST00000594235 CCDC125Q86Z20 511 aa27.77■■■□□ 2.04
SIN3B-203ENST00000594235 NUDT16Q96DE0 195 aaKnown RBP27.76■■■□□ 2.03
SIN3B-203ENST00000594235 KIAA1210Q9ULL0 1709 aa27.75■■■□□ 2.03
SIN3B-203ENST00000594235 ONECUT3O60422 494 aaPredicted RBP27.75■■■□□ 2.03
SIN3B-203ENST00000594235 SEPT12Q8IYM1 358 aa27.75■■■□□ 2.03
SIN3B-203ENST00000594235 CDK19Q9BWU1 502 aa27.73■■■□□ 2.03
SIN3B-203ENST00000594235 CCDC9Q9Y3X0 531 aaKnown RBP27.73■■■□□ 2.03
SIN3B-203ENST00000594235 ITSN1Q15811 1721 aa27.72■■■□□ 2.03
SIN3B-203ENST00000594235 BRWD3Q6RI45 1802 aa27.72■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 203.2 ms